PDPFA_DANRE
ID PDPFA_DANRE Reviewed; 117 AA.
AC Q6PFP3;
DT 20-JAN-2009, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 76.
DE RecName: Full=Pancreatic progenitor cell differentiation and proliferation factor A;
DE AltName: Full=Exocrine differentiation and proliferation factor A;
DE Short=Exocrine differentiation and proliferation factor;
GN Name=ppdpfa; Synonyms=exdpf, exdpfa;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=SJD;
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (SEP-2003) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP FUNCTION, TISSUE SPECIFICITY, DEVELOPMENTAL STAGE, DISRUPTION PHENOTYPE,
RP AND INDUCTION.
RX PubMed=19067490; DOI=10.1371/journal.pbio.0060293;
RA Jiang Z., Song J., Qi F., Xiao A., An X., Liu N.-A., Zhu Z., Zhang B.,
RA Lin S.;
RT "Exdpf is a key regulator of exocrine pancreas development controlled by
RT retinoic acid and ptf1a in zebrafish.";
RL PLoS Biol. 6:E293-E293(2008).
CC -!- FUNCTION: Probable regulator of exocrine pancreas development.
CC {ECO:0000269|PubMed:19067490}.
CC -!- TISSUE SPECIFICITY: Expressed exclusively in the exocrine cells during
CC pancreas development. {ECO:0000269|PubMed:19067490}.
CC -!- DEVELOPMENTAL STAGE: Expressed both maternally and zygotically.
CC Expression increases between 1 dpf and 2 dpf when the exocrine pancreas
CC starts to develop and is highest between 2 dpf and 5 dpf. Starts to
CC express in the pancreatic area at 33 hpf. Later in development, the
CC strongest domain of expression appears in the pancreas. Cells
CC expressing are located about 1 somite anterior to the cluster of
CC preproinsulin-positive cells, just before exocrine specification
CC begins. By 36 hpf, expressing cells start to contact the
CC preproinsulinpositive cells as a result of gut rotation. These
CC expressing cells continue to grow posteriorly to form a typical
CC pancreas-like shape at 3 dpf. From 33 hpf to 3 dpf, there is no overlap
CC between expressing cells and preproinsulinpositive cells, indicating
CC that expression is excluded from endocrine cells. Conversely,
CC expression completely overlaps with trypsin expression at 3 dpf.
CC {ECO:0000269|PubMed:19067490}.
CC -!- INDUCTION: Expression is directly regulated by pancreas-specific
CC transcription factor ptf1a. Probably also regulated by retinoic acid
CC (RA). {ECO:0000269|PubMed:19067490}.
CC -!- DISRUPTION PHENOTYPE: Impaired exocrine cell differentiation and
CC growth. Loss or significant reduction of exocrine cells are due to
CC lineage-specific cell cycle arrest but not apoptosis. The endocrine
CC cell mass appear normal. Cell cycle arrest is mediated by up-regulation
CC of cell cycle inhibitor genes cdkn1a, cdkn1b, and cyclin gccng1.
CC {ECO:0000269|PubMed:19067490}.
CC -!- SIMILARITY: Belongs to the PPDPF family. {ECO:0000305}.
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DR EMBL; BC057474; AAH57474.1; -; mRNA.
DR RefSeq; NP_956373.1; NM_200079.1.
DR AlphaFoldDB; Q6PFP3; -.
DR STRING; 7955.ENSDARP00000031112; -.
DR PaxDb; Q6PFP3; -.
DR Ensembl; ENSDART00000032996; ENSDARP00000031112; ENSDARG00000007682.
DR GeneID; 338304; -.
DR KEGG; dre:338304; -.
DR CTD; 338304; -.
DR ZFIN; ZDB-GENE-030219-204; ppdpfa.
DR eggNOG; ENOG502S1KD; Eukaryota.
DR GeneTree; ENSGT00390000009113; -.
DR HOGENOM; CLU_157362_0_0_1; -.
DR InParanoid; Q6PFP3; -.
DR OMA; VTCIARQ; -.
DR OrthoDB; 1540584at2759; -.
DR PhylomeDB; Q6PFP3; -.
DR TreeFam; TF333000; -.
DR PRO; PR:Q6PFP3; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Chromosome 8.
DR Bgee; ENSDARG00000007682; Expressed in cardiac ventricle and 52 other tissues.
DR ExpressionAtlas; Q6PFP3; baseline and differential.
DR GO; GO:0001708; P:cell fate specification; IMP:ZFIN.
DR GO; GO:0008283; P:cell population proliferation; IMP:ZFIN.
DR GO; GO:0031017; P:exocrine pancreas development; IMP:ZFIN.
DR InterPro; IPR026754; PPDPF.
DR PANTHER; PTHR14572; PTHR14572; 1.
DR Pfam; PF15060; PPDFL; 1.
PE 2: Evidence at transcript level;
KW Developmental protein; Differentiation; Reference proteome.
FT CHAIN 1..117
FT /note="Pancreatic progenitor cell differentiation and
FT proliferation factor A"
FT /id="PRO_0000359766"
FT REGION 22..46
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 22..36
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 117 AA; 12645 MW; C9E3A51CA8E773A9 CRC64;
MAAIPSSGSL IATHDYYRRR IGSTSSNSSC SSSEYTGEVI PHPPGLARQD SGHWWSSFFF
GKQNQMGTPN GFESQQKTGT YTVTNGQVTC VAREIVMKRH LSESSDSGKE PGSPLPS