PDRP_BACSU
ID PDRP_BACSU Reviewed; 270 AA.
AC P54470;
DT 01-OCT-1996, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-1996, sequence version 1.
DT 03-AUG-2022, entry version 121.
DE RecName: Full=Putative pyruvate, phosphate dikinase regulatory protein {ECO:0000255|HAMAP-Rule:MF_00921};
DE Short=PPDK regulatory protein {ECO:0000255|HAMAP-Rule:MF_00921};
DE EC=2.7.11.32 {ECO:0000255|HAMAP-Rule:MF_00921};
DE EC=2.7.4.27 {ECO:0000255|HAMAP-Rule:MF_00921};
GN Name=yqfL; OrderedLocusNames=BSU25240;
OS Bacillus subtilis (strain 168).
OC Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
OX NCBI_TaxID=224308;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=168 / JH642;
RX PubMed=8969508; DOI=10.1099/13500872-142-11-3103;
RA Mizuno M., Masuda S., Takemaru K., Hosono S., Sato T., Takeuchi M.,
RA Kobayashi Y.;
RT "Systematic sequencing of the 283 kb 210 degrees-232 degrees region of the
RT Bacillus subtilis genome containing the skin element and many sporulation
RT genes.";
RL Microbiology 142:3103-3111(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=168;
RX PubMed=9384377; DOI=10.1038/36786;
RA Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V.,
RA Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R.,
RA Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S.,
RA Bruschi C.V., Caldwell B., Capuano V., Carter N.M., Choi S.-K.,
RA Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F.,
RA Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D.,
RA Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M.,
RA Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P.,
RA Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K.,
RA Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S.,
RA Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y.,
RA Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G.,
RA Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J.,
RA Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C.,
RA Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S.,
RA Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B.,
RA Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S.,
RA Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M.,
RA Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y.,
RA Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J.,
RA Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A.,
RA Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M.,
RA Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S.,
RA Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E.,
RA Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K.,
RA Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E.,
RA Yoshikawa H., Danchin A.;
RT "The complete genome sequence of the Gram-positive bacterium Bacillus
RT subtilis.";
RL Nature 390:249-256(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 40-270.
RX PubMed=3086839; DOI=10.1093/nar/14.10.4293;
RA Wang L.F., Doi R.H.;
RT "Nucleotide sequence and organization of Bacillus subtilis RNA polymerase
RT major sigma (sigma 43) operon.";
RL Nucleic Acids Res. 14:4293-4307(1986).
RN [4]
RP FUNCTION IN GLUCONEOGENESIS REGULATION, INDUCTION, AND DISRUPTION
RP PHENOTYPE.
RX PubMed=15720552; DOI=10.1111/j.1365-2958.2005.04473.x;
RA Servant P., Le Coq D., Aymerich S.;
RT "CcpN (YqzB), a novel regulator for CcpA-independent catabolite repression
RT of Bacillus subtilis gluconeogenic genes.";
RL Mol. Microbiol. 55:1435-1451(2005).
CC -!- FUNCTION: Bifunctional serine/threonine kinase and phosphorylase
CC involved in the regulation of the pyruvate, phosphate dikinase (PPDK)
CC by catalyzing its phosphorylation/dephosphorylation.
CC {ECO:0000255|HAMAP-Rule:MF_00921, ECO:0000269|PubMed:15720552}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ADP + N(tele)-phospho-L-histidyl/L-threonyl-[pyruvate,
CC phosphate dikinase] = AMP + H(+) + N(tele)-phospho-L-histidyl/O-
CC phospho-L-threonyl-[pyruvate, phosphate dikinase];
CC Xref=Rhea:RHEA:43692, Rhea:RHEA-COMP:10650, Rhea:RHEA-COMP:10651,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:30013, ChEBI:CHEBI:61977,
CC ChEBI:CHEBI:83586, ChEBI:CHEBI:456215, ChEBI:CHEBI:456216;
CC EC=2.7.11.32; Evidence={ECO:0000255|HAMAP-Rule:MF_00921};
CC -!- CATALYTIC ACTIVITY:
CC Reaction=H(+) + N(tele)-phospho-L-histidyl/O-phospho-L-threonyl-
CC [pyruvate, phosphate dikinase] + phosphate = diphosphate + N(tele)-
CC phospho-L-histidyl/L-threonyl-[pyruvate, phosphate dikinase];
CC Xref=Rhea:RHEA:43696, Rhea:RHEA-COMP:10650, Rhea:RHEA-COMP:10651,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:30013, ChEBI:CHEBI:33019,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:61977, ChEBI:CHEBI:83586; EC=2.7.4.27;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_00921};
CC -!- INDUCTION: Constitutively expressed. {ECO:0000269|PubMed:15720552}.
CC -!- DISRUPTION PHENOTYPE: Lowers the level of gapB and pckA transcription
CC threefold under both glycolytic and gluconeogenic conditions.
CC {ECO:0000269|PubMed:15720552}.
CC -!- SIMILARITY: Belongs to the pyruvate, phosphate/water dikinase
CC regulatory protein family. PDRP subfamily. {ECO:0000255|HAMAP-
CC Rule:MF_00921}.
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DR EMBL; D84432; BAA12486.1; -; Genomic_DNA.
DR EMBL; AL009126; CAB14453.1; -; Genomic_DNA.
DR EMBL; X03897; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR PIR; G69953; G69953.
DR RefSeq; NP_390402.1; NC_000964.3.
DR RefSeq; WP_003230064.1; NZ_JNCM01000036.1.
DR AlphaFoldDB; P54470; -.
DR SMR; P54470; -.
DR STRING; 224308.BSU25240; -.
DR jPOST; P54470; -.
DR PaxDb; P54470; -.
DR PRIDE; P54470; -.
DR EnsemblBacteria; CAB14453; CAB14453; BSU_25240.
DR GeneID; 937889; -.
DR KEGG; bsu:BSU25240; -.
DR PATRIC; fig|224308.179.peg.2743; -.
DR eggNOG; COG1806; Bacteria.
DR InParanoid; P54470; -.
DR OMA; YAQCEFE; -.
DR PhylomeDB; P54470; -.
DR BioCyc; BSUB:BSU25240-MON; -.
DR Proteomes; UP000001570; Chromosome.
DR GO; GO:0043531; F:ADP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0016776; F:phosphotransferase activity, phosphate group as acceptor; IEA:UniProtKB-UniRule.
DR GO; GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006470; P:protein dephosphorylation; IEA:UniProtKB-UniRule.
DR GO; GO:0006468; P:protein phosphorylation; IEA:UniProtKB-UniRule.
DR HAMAP; MF_00921; PDRP; 1.
DR InterPro; IPR005177; Kinase-pyrophosphorylase.
DR InterPro; IPR026565; PPDK_reg.
DR PANTHER; PTHR31756; PTHR31756; 1.
DR Pfam; PF03618; Kinase-PPPase; 1.
PE 1: Evidence at protein level;
KW Kinase; Nucleotide-binding; Reference proteome;
KW Serine/threonine-protein kinase; Transferase.
FT CHAIN 1..270
FT /note="Putative pyruvate, phosphate dikinase regulatory
FT protein"
FT /id="PRO_0000196630"
FT BINDING 151..158
FT /ligand="ADP"
FT /ligand_id="ChEBI:CHEBI:456216"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00921"
FT CONFLICT 40..41
FT /note="IP -> NS (in Ref. 3)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 270 AA; 30349 MW; 55461D5B2C3BF252 CRC64;
MNNRIIYVVS DSVGETAELV VKAALSQFNG SADDTHVRRI PYVEDIGTIN EVISLAKADG
GIICFTLVVP EIREYLIAEA EKANVLYYDI IGPLIDKMET AYGLTAKYEP GRVRQLDEDY
FKKVEAIEFA VKYDDGRDPR GILKADIVLI GVSRTSKTPL SQYLAHKRLK VANVPIVPEV
DPPEELFNVD PKKCIGLKIS PDKLNHIRKE RLKSLGLNDK AIYANINRIK EELEYFEKIV
DRIGCQVVDV SNKAVEETAN IIHHLKTKNI
