ASST_METJA
ID ASST_METJA Reviewed; 509 AA.
AC Q57564;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1997, sequence version 1.
DT 03-AUG-2022, entry version 101.
DE RecName: Full=L-aspartate semialdehyde sulfurtransferase {ECO:0000250|UniProtKB:Q8TPT4};
DE EC=2.8.1.16 {ECO:0000250|UniProtKB:Q8TPT4};
GN OrderedLocusNames=MJ0100;
OS Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
OS 10045 / NBRC 100440) (Methanococcus jannaschii).
OC Archaea; Euryarchaeota; Methanomada group; Methanococci; Methanococcales;
OC Methanocaldococcaceae; Methanocaldococcus.
OX NCBI_TaxID=243232;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440;
RX PubMed=8688087; DOI=10.1126/science.273.5278.1058;
RA Bult C.J., White O., Olsen G.J., Zhou L., Fleischmann R.D., Sutton G.G.,
RA Blake J.A., FitzGerald L.M., Clayton R.A., Gocayne J.D., Kerlavage A.R.,
RA Dougherty B.A., Tomb J.-F., Adams M.D., Reich C.I., Overbeek R.,
RA Kirkness E.F., Weinstock K.G., Merrick J.M., Glodek A., Scott J.L.,
RA Geoghagen N.S.M., Weidman J.F., Fuhrmann J.L., Nguyen D., Utterback T.R.,
RA Kelley J.M., Peterson J.D., Sadow P.W., Hanna M.C., Cotton M.D.,
RA Roberts K.M., Hurst M.A., Kaine B.P., Borodovsky M., Klenk H.-P.,
RA Fraser C.M., Smith H.O., Woese C.R., Venter J.C.;
RT "Complete genome sequence of the methanogenic archaeon, Methanococcus
RT jannaschii.";
RL Science 273:1058-1073(1996).
RN [2]
RP CRYSTALLIZATION, AND SUBUNIT.
RX PubMed=18931440; DOI=10.1107/s1744309108027930;
RA Lucas M., Kortazar D., Astigarraga E., Fernandez J.A., Mato J.M.,
RA Martinez-Chantar M.L., Martinez-Cruz L.A.;
RT "Purification, crystallization and preliminary X-ray diffraction analysis
RT of the CBS-domain pair from the Methanococcus jannaschii protein MJ0100.";
RL Acta Crystallogr. F 64:936-941(2008).
RN [3] {ECO:0007744|PDB:3KPB, ECO:0007744|PDB:3KPC, ECO:0007744|PDB:3KPD}
RP X-RAY CRYSTALLOGRAPHY (1.60 ANGSTROMS) OF 388-509 IN COMPLEXES WITH
RP S-ADENOSYL-L-METHIONINE AND S-METHYL-5'-THIOADENOSINE, ACTIVITY REGULATION,
RP SUBUNIT, AND DOMAIN.
RX PubMed=20026078; DOI=10.1016/j.jmb.2009.12.012;
RA Lucas M., Encinar J.A., Arribas E.A., Oyenarte I., Garcia I.G.,
RA Kortazar D., Fernandez J.A., Mato J.M., Martinez-Chantar M.L.,
RA Martinez-Cruz L.A.;
RT "Binding of S-methyl-5'-thioadenosine and S-adenosyl-L-methionine to
RT protein MJ0100 triggers an open-to-closed conformational change in its CBS
RT motif pair.";
RL J. Mol. Biol. 396:800-820(2010).
CC -!- FUNCTION: Required for O-acetylhomoserine sulfhydrylase (OAHS)-
CC independent homocysteine (Hcy) biosynthesis. Together with MJ0099,
CC catalyzes the condensation of sulfide with aspartate semialdehyde to
CC generate homocysteine. Likely functions through persulfide
CC intermediate. {ECO:0000250|UniProtKB:Q8TPT4}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=3 H(+) + hydrogen sulfide + L-aspartate 4-semialdehyde +
CC reduced 2[4Fe-4S]-[ferredoxin] = H2O + L-homocysteine + oxidized
CC 2[4Fe-4S]-[ferredoxin]; Xref=Rhea:RHEA:58412, Rhea:RHEA-COMP:10002,
CC Rhea:RHEA-COMP:10004, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378,
CC ChEBI:CHEBI:29919, ChEBI:CHEBI:33722, ChEBI:CHEBI:33723,
CC ChEBI:CHEBI:58199, ChEBI:CHEBI:537519; EC=2.8.1.16;
CC Evidence={ECO:0000250|UniProtKB:Q8TPT4};
CC -!- ACTIVITY REGULATION: The ligand-induced conformational reorganization
CC of the protein could be an important regulatory mechanism.
CC {ECO:0000269|PubMed:20026078}.
CC -!- PATHWAY: Amino-acid biosynthesis. {ECO:0000250|UniProtKB:Q8TPT4}.
CC -!- SUBUNIT: Homodimer (PubMed:18931440, PubMed:20026078). May form a
CC complex with MJ0099 (By similarity). {ECO:0000250|UniProtKB:Q8TPT4,
CC ECO:0000269|PubMed:18931440, ECO:0000269|PubMed:20026078}.
CC -!- DOMAIN: The C-terminal cystathionine beta-synthase (CBS) domains can
CC bind different numbers of S-adenosyl-L-methionine (SAM) and S-methyl-
CC 5'-thioadenosine (MTA) ligands. Binding of SAM and MTA triggers a
CC drastic conformational change in the protein, which evolves
CC progressively from an open form in the absence of ligands to a closed
CC form when the four sites are fully occupied.
CC {ECO:0000269|PubMed:20026078}.
CC -!- SIMILARITY: Belongs to the L-aspartate semialdehyde sulfurtransferase
CC family. {ECO:0000305}.
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DR EMBL; L77117; AAB98080.1; -; Genomic_DNA.
DR PIR; D64312; D64312.
DR PDB; 3KPB; X-ray; 1.60 A; A/B/C/D=388-509.
DR PDB; 3KPC; X-ray; 1.79 A; A=386-509.
DR PDB; 3KPD; X-ray; 2.91 A; A/B/C/D=388-509.
DR PDBsum; 3KPB; -.
DR PDBsum; 3KPC; -.
DR PDBsum; 3KPD; -.
DR AlphaFoldDB; Q57564; -.
DR SMR; Q57564; -.
DR STRING; 243232.MJ_0100; -.
DR EnsemblBacteria; AAB98080; AAB98080; MJ_0100.
DR KEGG; mja:MJ_0100; -.
DR eggNOG; arCOG00620; Archaea.
DR HOGENOM; CLU_043239_0_0_2; -.
DR InParanoid; Q57564; -.
DR OMA; WVRGCYF; -.
DR PhylomeDB; Q57564; -.
DR BRENDA; 2.8.1.16; 3260.
DR EvolutionaryTrace; Q57564; -.
DR Proteomes; UP000000805; Chromosome.
DR GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR GO; GO:0009086; P:methionine biosynthetic process; IEA:UniProtKB-KW.
DR Gene3D; 3.10.580.10; -; 1.
DR InterPro; IPR000644; CBS_dom.
DR InterPro; IPR046342; CBS_dom_sf.
DR InterPro; IPR002708; HcyBio.
DR InterPro; IPR016426; MA1821-like.
DR Pfam; PF00571; CBS; 2.
DR Pfam; PF01837; HcyBio; 1.
DR PIRSF; PIRSF004698; UCP004698_CBS_MJ0100; 1.
DR SMART; SM00116; CBS; 2.
DR SUPFAM; SSF54631; SSF54631; 1.
DR PROSITE; PS51371; CBS; 2.
PE 1: Evidence at protein level;
KW 3D-structure; Amino-acid biosynthesis; CBS domain; Methionine biosynthesis;
KW Reference proteome; Repeat; Transferase.
FT CHAIN 1..509
FT /note="L-aspartate semialdehyde sulfurtransferase"
FT /id="PRO_0000106693"
FT DOMAIN 394..450
FT /note="CBS 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00703"
FT DOMAIN 455..509
FT /note="CBS 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00703"
FT ACT_SITE 133
FT /note="Cysteine persulfide intermediate"
FT /evidence="ECO:0000250|UniProtKB:Q8TPT4"
FT BINDING 395
FT /ligand="S-methyl-5'-thioadenosine"
FT /ligand_id="ChEBI:CHEBI:17509"
FT /evidence="ECO:0000269|PubMed:20026078"
FT BINDING 399
FT /ligand="S-methyl-5'-thioadenosine"
FT /ligand_id="ChEBI:CHEBI:17509"
FT /evidence="ECO:0000269|PubMed:20026078"
FT BINDING 421
FT /ligand="S-methyl-5'-thioadenosine"
FT /ligand_id="ChEBI:CHEBI:17509"
FT /evidence="ECO:0000269|PubMed:20026078"
FT BINDING 439
FT /ligand="S-adenosyl-L-methionine"
FT /ligand_id="ChEBI:CHEBI:59789"
FT /evidence="ECO:0000269|PubMed:20026078"
FT BINDING 456
FT /ligand="S-adenosyl-L-methionine"
FT /ligand_id="ChEBI:CHEBI:59789"
FT /evidence="ECO:0000269|PubMed:20026078"
FT BINDING 460
FT /ligand="S-adenosyl-L-methionine"
FT /ligand_id="ChEBI:CHEBI:59789"
FT /evidence="ECO:0000269|PubMed:20026078"
FT BINDING 479..482
FT /ligand="S-adenosyl-L-methionine"
FT /ligand_id="ChEBI:CHEBI:59789"
FT /evidence="ECO:0000269|PubMed:20026078"
FT BINDING 497..500
FT /ligand="S-methyl-5'-thioadenosine"
FT /ligand_id="ChEBI:CHEBI:17509"
FT /evidence="ECO:0000269|PubMed:20026078"
FT HELIX 390..393
FT /evidence="ECO:0007829|PDB:3KPB"
FT STRAND 394..397
FT /evidence="ECO:0007829|PDB:3KPD"
FT HELIX 407..417
FT /evidence="ECO:0007829|PDB:3KPB"
FT STRAND 422..425
FT /evidence="ECO:0007829|PDB:3KPB"
FT STRAND 429..435
FT /evidence="ECO:0007829|PDB:3KPB"
FT HELIX 437..445
FT /evidence="ECO:0007829|PDB:3KPB"
FT HELIX 451..453
FT /evidence="ECO:0007829|PDB:3KPB"
FT STRAND 455..458
FT /evidence="ECO:0007829|PDB:3KPB"
FT HELIX 468..478
FT /evidence="ECO:0007829|PDB:3KPB"
FT STRAND 481..486
FT /evidence="ECO:0007829|PDB:3KPB"
FT STRAND 491..497
FT /evidence="ECO:0007829|PDB:3KPB"
FT HELIX 498..505
FT /evidence="ECO:0007829|PDB:3KPB"
SQ SEQUENCE 509 AA; 56458 MW; 81417970CD74F38F CRC64;
MIMKTIKEIN EKIKKGEAVV VTAEEMIKIV EEEGAKRAAD YVDVVTTGTF GAMCSSGVFI
NFGHSDPPIK MLRIYLNNVE AYGGLAAVDA YIGAAQPNED PDVDIDYGGA HVIEDLVRGK
EVELYAEGYT TDCYPRKEVN VRITLDDVNQ AIMVNPRNCY QTYAAATNSR EEKIYTYMGI
LLPEYNNVHY SGAGQLNPLQ NDYNPETKSF NTIGIGTRIF LGGGIGYVIG EGTQHNPPFG
TLMVKGDLKQ MNPKFIRAAT MPRYGSTLYV GIGIPIPVLN EKIAERCAIR DEDIEVPIYD
YGFPRRDRPL IAKTNYKVLR SGKITLNVNI DGKDVEKTVK TGSVSSYKMA REVAETLKQW
ILDGKFLLTE RVDTLGRAEN KPMKSPITLV KDILSKPPIT AHSNISIMEA AKILIKHNIN
HLPIVDEHGK LVGIITSWDI AKALAQNKKT IEEIMTRNVI TAHEDEPVDH VAIKMSKYNI
SGVPVVDDYR RVVGIVTSED ISRLFGGKK