PELD_ASPNG
ID PELD_ASPNG Reviewed; 373 AA.
AC P22864;
DT 01-AUG-1991, integrated into UniProtKB/Swiss-Prot.
DT 01-AUG-1991, sequence version 1.
DT 03-AUG-2022, entry version 95.
DE RecName: Full=Pectin lyase D;
DE Short=PLD;
DE EC=4.2.2.10;
DE AltName: Full=Pectin lyase I;
DE Short=PLI;
DE Flags: Precursor;
GN Name=pelD;
OS Aspergillus niger.
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus;
OC Aspergillus subgen. Circumdati.
OX NCBI_TaxID=5061;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND PROTEIN SEQUENCE OF 20-30 AND
RP 148-167.
RC STRAIN=N756;
RX PubMed=2373363; DOI=10.1016/0378-1119(90)90211-9;
RA Gysler C., Harmsen J.A.M., Kester H.C.M., Visser J., Heim J.;
RT "Isolation and structure of the pectin lyase D-encoding gene from
RT Aspergillus niger.";
RL Gene 89:101-108(1990).
CC -!- FUNCTION: Pectinolytic enzymes consist of four classes of enzymes:
CC pectin lyase, polygalacturonase, pectin methylesterase and
CC rhamnogalacturonase. Among pectinolytic enzymes, pectin lyase is the
CC most important in depolymerization of pectin, since it cleaves internal
CC glycosidic bonds of highly methylated pectins (By similarity).
CC {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Eliminative cleavage of (1->4)-alpha-D-galacturonan methyl
CC ester to give oligosaccharides with 4-deoxy-6-O-methyl-alpha-D-
CC galact-4-enuronosyl groups at their non-reducing ends.; EC=4.2.2.10;
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000305}.
CC -!- PTM: May be O-glycosylated; does not contain N-acetylglucosamine.
CC -!- SIMILARITY: Belongs to the polysaccharide lyase 1 family.
CC {ECO:0000305}.
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DR EMBL; M55657; AAA32701.1; -; Genomic_DNA.
DR PIR; JH0155; JH0155.
DR AlphaFoldDB; P22864; -.
DR SMR; P22864; -.
DR STRING; 5061.CADANGAP00014082; -.
DR CAZy; PL1; Polysaccharide Lyase Family 1.
DR VEuPathDB; FungiDB:An19g00270; -.
DR VEuPathDB; FungiDB:ASPNIDRAFT2_1136270; -.
DR VEuPathDB; FungiDB:ATCC64974_62770; -.
DR VEuPathDB; FungiDB:M747DRAFT_273902; -.
DR eggNOG; ENOG502QXM6; Eukaryota.
DR BioCyc; MetaCyc:MON-20552; -.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0030570; F:pectate lyase activity; IEA:InterPro.
DR GO; GO:0047490; F:pectin lyase activity; IEA:UniProtKB-EC.
DR GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR GO; GO:0000272; P:polysaccharide catabolic process; IEA:UniProtKB-KW.
DR Gene3D; 2.160.20.10; -; 1.
DR InterPro; IPR002022; Pec_lyase.
DR InterPro; IPR012334; Pectin_lyas_fold.
DR InterPro; IPR011050; Pectin_lyase_fold/virulence.
DR InterPro; IPR045032; PEL.
DR PANTHER; PTHR31683; PTHR31683; 1.
DR Pfam; PF00544; Pectate_lyase_4; 1.
DR SMART; SM00656; Amb_all; 1.
DR SUPFAM; SSF51126; SSF51126; 1.
PE 1: Evidence at protein level;
KW Carbohydrate metabolism; Cell wall biogenesis/degradation;
KW Direct protein sequencing; Disulfide bond; Glycoprotein; Lyase;
KW Polysaccharide degradation; Secreted; Signal.
FT SIGNAL 1..19
FT /evidence="ECO:0000269|PubMed:2373363"
FT CHAIN 20..373
FT /note="Pectin lyase D"
FT /id="PRO_0000024898"
FT REGION 354..373
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT ACT_SITE 255
FT /evidence="ECO:0000255"
FT CARBOHYD 128
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 274
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 348
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT DISULFID 82..101
FT /evidence="ECO:0000250"
FT DISULFID 91..225
FT /evidence="ECO:0000250"
FT DISULFID 321..329
FT /evidence="ECO:0000250"
FT CONFLICT 27
FT /note="V -> E (in Ref. 1; AA sequence)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 373 AA; 39038 MW; B758DCCEFFE2345C CRC64;
MKYAAALTAI AALAARAAAV GVSGTPVGFA SSATGGGDAT PVYPTTTDEL VSYLGDDEAR
VIVLSKTFDF TDTEGTTTTT GCAPWGTASG CQLAINKDDW CTNYEPDAPT TTVTYNTAGE
LGITVNSNKS LIGEGTSGVI KGRGLRMVSG VSNIIIQNIA VTDINPEYVW GGDAITLDEA
DLVWIDHVTT ARIGRQHYVL GTDADSRVSI TNNYINGESD YSATCDGHHY WNVYLDGSSD
KVTFSGNYLY KTSGRAPKVQ DNTYLHIYNN YWENNSGHAF EIGSGGYVLA EGNYFSNVDT
VLETDTFEGA LFSSDSASST CESYIGRSCV ANVNGGDLTG TSTTVLSNLS GDTLPSADAA
STSPASNAGQ GNL