PEP4_ARATH
ID PEP4_ARATH Reviewed; 81 AA.
AC Q9FIA9; Q8L9J1;
DT 05-SEP-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 90.
DE RecName: Full=Elicitor peptide 4;
DE Flags: Precursor;
GN Name=PEP4; Synonyms=PROPEP4; OrderedLocusNames=At5g09980; ORFNames=MYH9.20;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10048488; DOI=10.1093/dnares/5.6.379;
RA Asamizu E., Sato S., Kaneko T., Nakamura Y., Kotani H., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. VIII. Sequence
RT features of the regions of 1,081,958 bp covered by seventeen physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:379-391(1998).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=16785434; DOI=10.1073/pnas.0603727103;
RA Huffaker A., Pearce G., Ryan C.A.;
RT "An endogenous peptide signal in Arabidopsis activates components of the
RT innate immune response.";
RL Proc. Natl. Acad. Sci. U.S.A. 103:10098-10103(2006).
CC -!- FUNCTION: Elicitor of plant defense. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the brassicaceae elicitor peptide family.
CC {ECO:0000305}.
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DR EMBL; AB016893; BAB09419.1; -; Genomic_DNA.
DR EMBL; CP002688; AED91475.1; -; Genomic_DNA.
DR EMBL; AY052255; AAK97725.1; -; mRNA.
DR EMBL; AY060509; AAL31122.1; -; mRNA.
DR EMBL; AY088403; AAM65940.1; -; mRNA.
DR RefSeq; NP_568223.1; NM_121035.4.
DR AlphaFoldDB; Q9FIA9; -.
DR SMR; Q9FIA9; -.
DR STRING; 3702.AT5G09980.1; -.
DR PaxDb; Q9FIA9; -.
DR PRIDE; Q9FIA9; -.
DR ProteomicsDB; 235091; -.
DR EnsemblPlants; AT5G09980.1; AT5G09980.1; AT5G09980.
DR GeneID; 830859; -.
DR Gramene; AT5G09980.1; AT5G09980.1; AT5G09980.
DR KEGG; ath:AT5G09980; -.
DR Araport; AT5G09980; -.
DR TAIR; locus:2178218; AT5G09980.
DR HOGENOM; CLU_2486520_0_0_1; -.
DR InParanoid; Q9FIA9; -.
DR OMA; LWIPFRF; -.
DR OrthoDB; 1638710at2759; -.
DR PRO; PR:Q9FIA9; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FIA9; baseline and differential.
DR Genevisible; Q9FIA9; AT.
DR GO; GO:0045087; P:innate immune response; IEA:InterPro.
DR GO; GO:0009753; P:response to jasmonic acid; IEP:TAIR.
DR InterPro; IPR035176; PEP.
DR Pfam; PF17232; Pep1_7; 1.
PE 3: Inferred from homology;
KW Plant defense; Reference proteome.
FT PROPEP 1..54
FT /evidence="ECO:0000250"
FT /id="PRO_0000249085"
FT PEPTIDE 55..81
FT /note="Elicitor peptide 4"
FT /id="PRO_0000249086"
FT REGION 57..81
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT SITE 71
FT /note="Required for ligand-receptor interaction"
FT /evidence="ECO:0000250"
FT CONFLICT 58
FT /note="G -> V (in Ref. 4; AAM65940)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 81 AA; 9077 MW; 527E67E6E289FF52 CRC64;
MERGVSYYLW IPFKFIHQTF GSLLLKLLGL RSPSDHSFPE DGEEEVKVVE VSSRGLPGKK
NVLKKSRESS GKPGGTNKKP F