PESC_SALSA
ID PESC_SALSA Reviewed; 582 AA.
AC B5X171;
DT 05-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 25-NOV-2008, sequence version 1.
DT 03-AUG-2022, entry version 42.
DE RecName: Full=Pescadillo homolog {ECO:0000255|HAMAP-Rule:MF_03028};
GN Name=pes1;
OS Salmo salar (Atlantic salmon).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Salmo.
OX NCBI_TaxID=8030;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Brain;
RX PubMed=20433749; DOI=10.1186/1471-2164-11-279;
RA Leong J.S., Jantzen S.G., von Schalburg K.R., Cooper G.A., Messmer A.M.,
RA Liao N.Y., Munro S., Moore R., Holt R.A., Jones S.J., Davidson W.S.,
RA Koop B.F.;
RT "Salmo salar and Esox lucius full-length cDNA sequences reveal changes in
RT evolutionary pressures on a post-tetraploidization genome.";
RL BMC Genomics 11:279-279(2010).
CC -!- FUNCTION: Component of the PeBoW complex, which is required for
CC maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S
CC ribosome. {ECO:0000255|HAMAP-Rule:MF_03028}.
CC -!- SUBUNIT: Component of the PeBoW complex, composed of bop1, pes1 and
CC wdr12. The complex is held together by bop1, which interacts with pes1
CC via its N-terminal domain and with wdr12 via a high-affinity
CC interaction between the seven-bladed beta-propeller domains of the 2
CC proteins. The PeBoW complex associates with the 66S pre-ribosome.
CC {ECO:0000255|HAMAP-Rule:MF_03028}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000255|HAMAP-
CC Rule:MF_03028}. Nucleus, nucleoplasm {ECO:0000255|HAMAP-Rule:MF_03028}.
CC -!- SIMILARITY: Belongs to the pescadillo family. {ECO:0000255|HAMAP-
CC Rule:MF_03028}.
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DR EMBL; BT044790; ACI33052.1; -; mRNA.
DR RefSeq; NP_001133338.1; NM_001139866.1.
DR AlphaFoldDB; B5X171; -.
DR SMR; B5X171; -.
DR STRING; 8030.ENSSSAP00000076846; -.
DR GeneID; 100194837; -.
DR KEGG; sasa:100194837; -.
DR CTD; 30228; -.
DR OrthoDB; 777920at2759; -.
DR Proteomes; UP000087266; Chromosome ssa20.
DR GO; GO:0005730; C:nucleolus; ISS:UniProtKB.
DR GO; GO:0005654; C:nucleoplasm; ISS:UniProtKB.
DR GO; GO:0070545; C:PeBoW complex; ISS:UniProtKB.
DR GO; GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
DR GO; GO:0043021; F:ribonucleoprotein complex binding; IEA:UniProtKB-UniRule.
DR GO; GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
DR GO; GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
DR GO; GO:0051726; P:regulation of cell cycle; ISS:UniProtKB.
DR Gene3D; 3.40.50.10190; -; 1.
DR HAMAP; MF_03028; Pescadillo; 1.
DR InterPro; IPR001357; BRCT_dom.
DR InterPro; IPR036420; BRCT_dom_sf.
DR InterPro; IPR010613; PES.
DR PANTHER; PTHR12221; PTHR12221; 1.
DR Pfam; PF16589; BRCT_2; 1.
DR Pfam; PF06732; Pescadillo_N; 1.
DR SMART; SM00292; BRCT; 1.
DR SUPFAM; SSF52113; SSF52113; 1.
DR PROSITE; PS50172; BRCT; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Nucleus; Reference proteome; Ribosome biogenesis;
KW rRNA processing.
FT CHAIN 1..582
FT /note="Pescadillo homolog"
FT /id="PRO_0000370446"
FT DOMAIN 323..416
FT /note="BRCT"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_03028"
FT REGION 294..317
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 445..511
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 554..582
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 277..329
FT /evidence="ECO:0000255|HAMAP-Rule:MF_03028"
FT COILED 517..582
FT /evidence="ECO:0000255|HAMAP-Rule:MF_03028"
FT COMPBIAS 454..476
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 477..491
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 554..574
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 582 AA; 68478 MW; 4A7B18DFE39CDF60 CRC64;
MGGLQKKKYE RGSATNYITR NKARKKLQLS LADFRRLCIL KGIYPHEPKH KKKVNKGSTA
PRTFYLLKDI RFLLHEPIVR KFREYKVFVR KLRKAYGKAE WTGVERLRDN KPGYKLDHII
KERYPTFIDA LRDIDDALSM CFLFSTFART GKCHVQTITL CRRLTVEWMN YVVTSRSLRK
VFLSIKGIYY QAEVLGQLIT WLVPYQFAHD HPTDVDYRVM ATFTEMYTTL FGFINFRLYQ
TLNLVYPPKL DSKAESELKA EHEEDYAMDS ESYLEKLSAL SASLARVVAT VEEEENQLDN
FPTEEEDQEN MQAREKEQKE QEAQKRLFEG LKFFLNREVP RESLAFILRC FGAEVSWDKS
LCIGGTYEVT DETITHQIVD RPDMDKQYIN RYYIQPQWVF DSVNAKMRLP VEDYFLGTML
PPHLSPFVEE KDGDYVPPEK LKLMALQRGE KPVQEEDEEE EDEDEEEDDD VDDEEFTEEK
NLKKMEDTRA QGKTLSVKVT PGKVKPWETG SVGNKVRLEQ EEKAEEKRLA IMMMKKKEKY
LYDKIMFGKK RTTREVNKLT AKRKAHEDAS KAQKKQKKAK KQ