PESC_XENTR
ID PESC_XENTR Reviewed; 580 AA.
AC Q6DEV3; Q28JA9; Q6P1T6;
DT 05-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2004, sequence version 1.
DT 03-AUG-2022, entry version 85.
DE RecName: Full=Pescadillo homolog {ECO:0000255|HAMAP-Rule:MF_03028};
GN Name=pes1; ORFNames=TNeu102a04.1;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Neurula;
RG Sanger Xenopus tropicalis EST/cDNA project;
RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Component of the PeBoW complex, which is required for
CC maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S
CC ribosome. {ECO:0000255|HAMAP-Rule:MF_03028}.
CC -!- SUBUNIT: Component of the PeBoW complex, composed of bop1, pes1 and
CC wdr12. The complex is held together by bop1, which interacts with pes1
CC via its N-terminal domain and with wdr12 via a high-affinity
CC interaction between the seven-bladed beta-propeller domains of the 2
CC proteins. The PeBoW complex associates with the 66S pre-ribosome.
CC {ECO:0000255|HAMAP-Rule:MF_03028}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000255|HAMAP-
CC Rule:MF_03028}. Nucleus, nucleoplasm {ECO:0000255|HAMAP-Rule:MF_03028}.
CC -!- SIMILARITY: Belongs to the pescadillo family. {ECO:0000255|HAMAP-
CC Rule:MF_03028}.
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DR EMBL; CR759982; CAJ82755.1; -; mRNA.
DR EMBL; BC064875; AAH64875.1; -; mRNA.
DR EMBL; BC076991; AAH76991.1; -; mRNA.
DR RefSeq; NP_989410.1; NM_204079.1.
DR AlphaFoldDB; Q6DEV3; -.
DR SMR; Q6DEV3; -.
DR DNASU; 395049; -.
DR GeneID; 395049; -.
DR KEGG; xtr:395049; -.
DR CTD; 23481; -.
DR Xenbase; XB-GENE-480670; pes1.
DR InParanoid; Q6DEV3; -.
DR OrthoDB; 777920at2759; -.
DR Proteomes; UP000008143; Chromosome 1.
DR Proteomes; UP000790000; Unplaced.
DR GO; GO:0005730; C:nucleolus; ISS:UniProtKB.
DR GO; GO:0005654; C:nucleoplasm; ISS:UniProtKB.
DR GO; GO:0070545; C:PeBoW complex; ISS:UniProtKB.
DR GO; GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
DR GO; GO:0043021; F:ribonucleoprotein complex binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
DR GO; GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
DR GO; GO:0051726; P:regulation of cell cycle; ISS:UniProtKB.
DR Gene3D; 3.40.50.10190; -; 1.
DR HAMAP; MF_03028; Pescadillo; 1.
DR InterPro; IPR001357; BRCT_dom.
DR InterPro; IPR036420; BRCT_dom_sf.
DR InterPro; IPR010613; PES.
DR PANTHER; PTHR12221; PTHR12221; 1.
DR Pfam; PF16589; BRCT_2; 1.
DR Pfam; PF06732; Pescadillo_N; 1.
DR SMART; SM00292; BRCT; 1.
DR SUPFAM; SSF52113; SSF52113; 1.
DR PROSITE; PS50172; BRCT; 1.
PE 2: Evidence at transcript level;
KW Nucleus; Reference proteome; Ribosome biogenesis; rRNA processing.
FT CHAIN 1..580
FT /note="Pescadillo homolog"
FT /id="PRO_0000370448"
FT DOMAIN 323..416
FT /note="BRCT"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_03028"
FT REGION 291..321
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 448..496
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 293..307
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 451..481
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 482..496
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 452
FT /note="P -> PE (in Ref. 2; AAH64875)"
FT /evidence="ECO:0000305"
FT CONFLICT 460..466
FT /note="Missing (in Ref. 1; CAJ82755)"
FT /evidence="ECO:0000305"
FT CONFLICT 538
FT /note="K -> E (in Ref. 1; CAJ82755)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 580 AA; 68001 MW; AB98ED3715A884AD CRC64;
MGGLEKKKYE RGSATNYITR NKARKKLQLS LPDFRRLCIL KGIYPHEPKH KKKVNKGSTA
PRTFYLLKDI KFLLHEPIVG KFREYKVFVR RLRKAYGKRE WDAVDRIRDN KPAYKLDHII
KERYPTFIDA VRDLDDALSM CFLFSTFPRT GKCHVQTIQL CRRLSVEFLN YVIASRSLRK
VFLSIKGIYY QADILGQTVT WITPYAFSHD HPTDVDYRVM ATFTEFYTTL LGFVNFRLYQ
TLNLQYPPKL DYFSEADLKS DNEDKYALET EAYMEKLAAL SASLSRVIPS EPEEENEVDE
FPADPENAGQ EEEQKKQLQE EEKHKSMFVG LKFFLNREVP RDALAFIIRS FGGEVSWDAS
VCIGATYNSA NPSITHHIVD RPSIQTQIIN RYYLQPQWVF DCVNARMLLP VEDYFPGVLL
PPHLSPFVQE KEGDYIPPEK LRLMALQKGE NPEDDDDDDE EDDEDEEEDD EDEDDEENEE
EEEDKKLRHL ENKKVGQNKL NVRITAGKVK VEDRTQAAEQ EKTEEKRLAI MMMKKKEKYL
YNKIMFGKKR KVREANKLAL KRKAHDESVK VERKKKAKKH