PETD_LOTJA
ID PETD_LOTJA Reviewed; 160 AA.
AC Q9BBQ5;
DT 10-OCT-2002, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2001, sequence version 1.
DT 25-MAY-2022, entry version 81.
DE RecName: Full=Cytochrome b6-f complex subunit 4 {ECO:0000255|HAMAP-Rule:MF_01344};
DE AltName: Full=17 kDa polypeptide {ECO:0000255|HAMAP-Rule:MF_01344};
GN Name=petD {ECO:0000255|HAMAP-Rule:MF_01344};
OS Lotus japonicus (Lotus corniculatus var. japonicus).
OG Plastid; Chloroplast.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; robinioid clade; Loteae; Lotus.
OX NCBI_TaxID=34305;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Miyakojima MG-20;
RX PubMed=11214967; DOI=10.1093/dnares/7.6.323;
RA Kato T., Kaneko T., Sato S., Nakamura Y., Tabata S.;
RT "Complete structure of the chloroplast genome of a legume, Lotus
RT japonicus.";
RL DNA Res. 7:323-330(2000).
CC -!- FUNCTION: Component of the cytochrome b6-f complex, which mediates
CC electron transfer between photosystem II (PSII) and photosystem I
CC (PSI), cyclic electron flow around PSI, and state transitions.
CC {ECO:0000255|HAMAP-Rule:MF_01344}.
CC -!- SUBUNIT: The 4 large subunits of the cytochrome b6-f complex are
CC cytochrome b6, subunit IV (17 kDa polypeptide, petD), cytochrome f and
CC the Rieske protein, while the 4 small subunits are petG, petL, petM and
CC petN. The complex functions as a dimer (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast thylakoid membrane
CC {ECO:0000255|HAMAP-Rule:MF_01344}; Multi-pass membrane protein
CC {ECO:0000255|HAMAP-Rule:MF_01344}.
CC -!- SIMILARITY: Belongs to the cytochrome b family. PetD subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_01344}.
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DR EMBL; AP002983; BAB33227.1; -; Genomic_DNA.
DR RefSeq; NP_084828.1; NC_002694.1.
DR AlphaFoldDB; Q9BBQ5; -.
DR SMR; Q9BBQ5; -.
DR GeneID; 802874; -.
DR GO; GO:0009535; C:chloroplast thylakoid membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0045158; F:electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity; IEA:UniProtKB-UniRule.
DR GO; GO:0045156; F:electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; IEA:InterPro.
DR GO; GO:0009767; P:photosynthetic electron transport chain; IEA:InterPro.
DR CDD; cd00290; cytochrome_b_C; 1.
DR HAMAP; MF_01344; Cytb6_f_subIV; 1.
DR InterPro; IPR005798; Cyt_b/b6_C.
DR InterPro; IPR036150; Cyt_b/b6_C_sf.
DR InterPro; IPR005870; Cyt_b6/f_cplx_suIV.
DR Pfam; PF00032; Cytochrom_B_C; 1.
DR PIRSF; PIRSF000033; B6f_17K; 1.
DR SUPFAM; SSF81648; SSF81648; 1.
DR TIGRFAMs; TIGR01156; cytb6/f_IV; 1.
DR PROSITE; PS51003; CYTB_CTER; 1.
PE 3: Inferred from homology;
KW Chloroplast; Electron transport; Membrane; Photosynthesis; Plastid;
KW Thylakoid; Transmembrane; Transmembrane helix; Transport.
FT CHAIN 1..160
FT /note="Cytochrome b6-f complex subunit 4"
FT /id="PRO_0000061866"
FT TRANSMEM 36..56
FT /note="Helical"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01344"
FT TRANSMEM 95..115
FT /note="Helical"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01344"
FT TRANSMEM 131..151
FT /note="Helical"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01344"
SQ SEQUENCE 160 AA; 17475 MW; F9E6274A8581B8D0 CRC64;
MGVTKKPDLN DPVLRAKLAK GMGHNYYGEP AWPNDLLYIF PVVILGTIAC NVGLAVLEPS
MIGEPADPFA TPLEILPEWY FFPVFQILRT VPNKLLGVLL MVSVPAGLVT VPFLENVNKF
QNPFRRPVAT TVFLIGTAVS LWLGIGATLP IEKSLTLGLF
