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PETD_SYNP2
ID   PETD_SYNP2              Reviewed;         160 AA.
AC   P28057; B1XIH4;
DT   01-AUG-1992, integrated into UniProtKB/Swiss-Prot.
DT   01-AUG-1992, sequence version 1.
DT   25-MAY-2022, entry version 133.
DE   RecName: Full=Cytochrome b6-f complex subunit 4 {ECO:0000255|HAMAP-Rule:MF_01344};
DE   AltName: Full=17 kDa polypeptide {ECO:0000255|HAMAP-Rule:MF_01344};
GN   Name=petD {ECO:0000255|HAMAP-Rule:MF_01344};
GN   OrderedLocusNames=SYNPCC7002_A0841;
OS   Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum
OS   quadruplicatum).
OC   Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus;
OC   unclassified Synechococcus.
OX   NCBI_TaxID=32049;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX   PubMed=1421151; DOI=10.1007/bf00040607;
RA   Brand S.N., Tan X., Widger W.R.;
RT   "Cloning and sequencing of the petBD operon from the cyanobacterium
RT   Synechococcus sp. PCC 7002.";
RL   Plant Mol. Biol. 20:481-491(1992).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 27264 / PCC 7002 / PR-6;
RA   Li T., Zhao J., Zhao C., Liu Z., Zhao F., Marquardt J., Nomura C.T.,
RA   Persson S., Detter J.C., Richardson P.M., Lanz C., Schuster S.C., Wang J.,
RA   Li S., Huang X., Cai T., Yu Z., Luo J., Zhao J., Bryant D.A.;
RT   "Complete sequence of Synechococcus sp. PCC 7002.";
RL   Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Component of the cytochrome b6-f complex, which mediates
CC       electron transfer between photosystem II (PSII) and photosystem I
CC       (PSI), cyclic electron flow around PSI, and state transitions.
CC       {ECO:0000255|HAMAP-Rule:MF_01344}.
CC   -!- SUBUNIT: The 4 large subunits of the cytochrome b6-f complex are
CC       cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and
CC       the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and
CC       PetN. The complex functions as a dimer. {ECO:0000255|HAMAP-
CC       Rule:MF_01344}.
CC   -!- SUBCELLULAR LOCATION: Cellular thylakoid membrane {ECO:0000255|HAMAP-
CC       Rule:MF_01344}; Multi-pass membrane protein {ECO:0000255|HAMAP-
CC       Rule:MF_01344}.
CC   -!- SIMILARITY: Belongs to the cytochrome b family. PetD subfamily.
CC       {ECO:0000255|HAMAP-Rule:MF_01344}.
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DR   EMBL; X63049; CAA44775.1; -; Genomic_DNA.
DR   EMBL; CP000951; ACA98845.1; -; Genomic_DNA.
DR   RefSeq; WP_012306469.1; NC_010475.1.
DR   AlphaFoldDB; P28057; -.
DR   SMR; P28057; -.
DR   STRING; 32049.SYNPCC7002_A0841; -.
DR   EnsemblBacteria; ACA98845; ACA98845; SYNPCC7002_A0841.
DR   KEGG; syp:SYNPCC7002_A0841; -.
DR   eggNOG; COG1290; Bacteria.
DR   HOGENOM; CLU_112652_0_0_3; -.
DR   OMA; KKGMGHN; -.
DR   Proteomes; UP000001688; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0031676; C:plasma membrane-derived thylakoid membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0045158; F:electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0045156; F:electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; IEA:InterPro.
DR   GO; GO:0009767; P:photosynthetic electron transport chain; IEA:InterPro.
DR   CDD; cd00290; cytochrome_b_C; 1.
DR   HAMAP; MF_01344; Cytb6_f_subIV; 1.
DR   InterPro; IPR005798; Cyt_b/b6_C.
DR   InterPro; IPR036150; Cyt_b/b6_C_sf.
DR   InterPro; IPR005870; Cyt_b6/f_cplx_suIV.
DR   Pfam; PF00032; Cytochrom_B_C; 1.
DR   PIRSF; PIRSF000033; B6f_17K; 1.
DR   SUPFAM; SSF81648; SSF81648; 1.
DR   TIGRFAMs; TIGR01156; cytb6/f_IV; 1.
DR   PROSITE; PS51003; CYTB_CTER; 1.
PE   3: Inferred from homology;
KW   Electron transport; Membrane; Photosynthesis; Reference proteome;
KW   Thylakoid; Transmembrane; Transmembrane helix; Transport.
FT   CHAIN           1..160
FT                   /note="Cytochrome b6-f complex subunit 4"
FT                   /id="PRO_0000061909"
FT   TRANSMEM        36..56
FT                   /note="Helical"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01344"
FT   TRANSMEM        95..115
FT                   /note="Helical"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01344"
FT   TRANSMEM        131..151
FT                   /note="Helical"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01344"
SQ   SEQUENCE   160 AA;  17537 MW;  E0D8081AE4CAEBE4 CRC64;
     MSIMKKPDLS DPKLRAKLAQ NMGHNYYGEP AWPNDILFTF PICIAGTIGL ITGLAILDPA
     MIGEPGNPFA TPLEILPEWY LYPVFQILRV LPNKLLGIAC QGAIPLGLMM VPFIESVNKF
     QNPFRRPVAM AVFLFGTAVT LWLGAGACFP IDESLTLGLF
 
 
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