PEX32_ARATH
ID PEX32_ARATH Reviewed; 364 AA.
AC Q8S9K7; Q9C6X6;
DT 08-FEB-2011, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2002, sequence version 1.
DT 03-AUG-2022, entry version 106.
DE RecName: Full=Peroxisome biogenesis protein 3-2;
DE AltName: Full=Peroxin-3-2;
DE Short=AtPEX3-2;
GN Name=PEX3-2; OrderedLocusNames=At1g48635; ORFNames=F11I4.17, F9P7.1;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP FUNCTION, AND IDENTIFICATION.
RX PubMed=17478547; DOI=10.1093/pcp/pcm053;
RA Nito K., Kamigaki A., Kondo M., Hayashi M., Nishimura M.;
RT "Functional classification of Arabidopsis peroxisome biogenesis factors
RT proposed from analyses of knockdown mutants.";
RL Plant Cell Physiol. 48:763-774(2007).
CC -!- FUNCTION: Involved in morphology determination of peroxisomes, but not
CC in import of peroxisomal matrix proteins. May act as a docking factor
CC for PEX19 and be necessary for the import of peroxisomal membrane
CC proteins in the peroxisomes. {ECO:0000269|PubMed:17478547}.
CC -!- SUBCELLULAR LOCATION: Peroxisome membrane {ECO:0000250}; Single-pass
CC membrane protein {ECO:0000250}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=1;
CC Comment=A number of isoforms are produced. According to EST
CC sequences.;
CC Name=1;
CC IsoId=Q8S9K7-1; Sequence=Displayed;
CC -!- SIMILARITY: Belongs to the peroxin-3 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAG50845.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC074308; AAG50845.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE32330.1; -; Genomic_DNA.
DR EMBL; AY074860; AAL75911.1; -; mRNA.
DR EMBL; AY124818; AAM70527.1; -; mRNA.
DR EMBL; AK175341; BAD43104.1; -; mRNA.
DR RefSeq; NP_683410.1; NM_148569.5. [Q8S9K7-1]
DR AlphaFoldDB; Q8S9K7; -.
DR SMR; Q8S9K7; -.
DR BioGRID; 26510; 2.
DR STRING; 3702.AT1G48635.2; -.
DR iPTMnet; Q8S9K7; -.
DR PRIDE; Q8S9K7; -.
DR ProteomicsDB; 251245; -. [Q8S9K7-1]
DR EnsemblPlants; AT1G48635.1; AT1G48635.1; AT1G48635. [Q8S9K7-1]
DR GeneID; 841285; -.
DR Gramene; AT1G48635.1; AT1G48635.1; AT1G48635. [Q8S9K7-1]
DR KEGG; ath:AT1G48635; -.
DR Araport; AT1G48635; -.
DR eggNOG; KOG4444; Eukaryota.
DR OMA; MSMDQVS; -.
DR PhylomeDB; Q8S9K7; -.
DR PRO; PR:Q8S9K7; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q8S9K7; baseline and differential.
DR GO; GO:0005779; C:integral component of peroxisomal membrane; IBA:GO_Central.
DR GO; GO:0030674; F:protein-macromolecule adaptor activity; IBA:GO_Central.
DR GO; GO:0045046; P:protein import into peroxisome membrane; IBA:GO_Central.
DR InterPro; IPR006966; Peroxin-3.
DR PANTHER; PTHR28080; PTHR28080; 1.
DR Pfam; PF04882; Peroxin-3; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Coiled coil; Membrane; Peroxisome;
KW Peroxisome biogenesis; Protein transport; Reference proteome;
KW Transmembrane; Transmembrane helix; Transport.
FT CHAIN 1..364
FT /note="Peroxisome biogenesis protein 3-2"
FT /id="PRO_0000404528"
FT TRANSMEM 15..32
FT /note="Helical"
FT /evidence="ECO:0000255"
FT COILED 33..62
FT /evidence="ECO:0000255"
SQ SEQUENCE 364 AA; 41696 MW; 83828408D3B48A49 CRC64;
MDFVRGFWRK HRRKVLVTAG CLGSGYLLYK LYNSHTRRLA DLERELAHER ENDEIIKTQM
KAHFESIQMI VDSTTLPHAM QFLSIRISEE IDVSHVMDRL NQGKGMLSPP EKLQLWDELK
ILSFTRMVLS LWSVTMLSLY IRVQVNILGR HLYVDTARAL GSSHLLEEVD LIDRDDEQKF
LSSADFLVTN AMPSLISDMQ GSAEEVLKGK QLKDVITTRV LQETVMQIVD VFMSTGSPHH
WVDYLMMPQD TKLSRTTSDS SDEAVSKFHQ LMVETREVLI STEFTNIVEI SLKCFTDVLV
EEMETQTEAG GLATGKPLAK VLPQIEKTMN VITAEPSKNR FLQIIRDLPE VKLFFTLLYA
NMPQ
