PF23B_XENLA
ID PF23B_XENLA Reviewed; 269 AA.
AC Q0IHB0;
DT 11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT 03-OCT-2006, sequence version 1.
DT 03-AUG-2022, entry version 57.
DE RecName: Full=PHD finger protein 23B {ECO:0000305};
GN Name=phf23-b {ECO:0000305};
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Acts as a negative regulator of autophagy.
CC {ECO:0000250|UniProtKB:Q9BUL5}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:Q9BUL5}. Cytoplasm
CC {ECO:0000250|UniProtKB:Q9BUL5}.
CC -!- DOMAIN: The PHD-type zinc-finger domain is required for negative
CC regulation of autophagy. {ECO:0000250|UniProtKB:Q9BUL5}.
CC -!- SIMILARITY: Belongs to the PHF23 family. {ECO:0000305}.
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DR EMBL; BC123233; AAI23234.1; -; mRNA.
DR RefSeq; NP_001090358.1; NM_001096889.1.
DR AlphaFoldDB; Q0IHB0; -.
DR SMR; Q0IHB0; -.
DR DNASU; 779269; -.
DR GeneID; 779269; -.
DR KEGG; xla:779269; -.
DR CTD; 779269; -.
DR Xenbase; XB-GENE-6252782; phf23l.L.
DR OrthoDB; 982722at2759; -.
DR Proteomes; UP000186698; Chromosome 3S.
DR Bgee; 779269; Expressed in oocyte and 19 other tissues.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006914; P:autophagy; IEA:UniProtKB-KW.
DR Gene3D; 3.30.40.10; -; 1.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR SMART; SM00249; PHD; 1.
DR SUPFAM; SSF57903; SSF57903; 1.
DR PROSITE; PS01359; ZF_PHD_1; 1.
PE 2: Evidence at transcript level;
KW Autophagy; Cytoplasm; Metal-binding; Nucleus; Reference proteome; Zinc;
KW Zinc-finger.
FT CHAIN 1..269
FT /note="PHD finger protein 23B"
FT /id="PRO_0000302836"
FT ZN_FING 209..257
FT /note="PHD-type"
FT REGION 1..31
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 52..193
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 144..164
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 178..193
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 269 AA; 29128 MW; 85E8B3C3E8CFF998 CRC64;
MLETTNGEAS PEDPPLNLKS LSQPPQKRSR TVEDFNRFCS FVLTYAGYIP TPATEERPWT
PPSSVSPHRT EESDGWDSSP QLPVPSDPPQ PPATSDISTI ETFVMKAKSQ GGGGNSIMKT
GGPIGGSGEQ VKKGSRRKRR QLHRGGVTMS DTDTDEEERD KRPAGSLPAP QLPPSAESSR
DGGGSSSDTD TQVMDEDIMV ESGDDSWDLV TCYCEKPFAG RPMIECNICC TWVHLSCAKI
RKSNVPDVYY CQKCRGGRGS GGTALKEEP