PFS2_CANAL
ID PFS2_CANAL Reviewed; 543 AA.
AC Q59WJ4; A0A1D8PF28;
DT 30-MAY-2006, integrated into UniProtKB/Swiss-Prot.
DT 15-MAR-2017, sequence version 2.
DT 03-AUG-2022, entry version 98.
DE RecName: Full=Polyadenylation factor subunit 2;
GN Name=PFS2; OrderedLocusNames=CAALFM_C111090CA;
GN ORFNames=CaO19.2307, CaO19.9843;
OS Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida.
OX NCBI_TaxID=237561;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=15123810; DOI=10.1073/pnas.0401648101;
RA Jones T., Federspiel N.A., Chibana H., Dungan J., Kalman S., Magee B.B.,
RA Newport G., Thorstenson Y.R., Agabian N., Magee P.T., Davis R.W.,
RA Scherer S.;
RT "The diploid genome sequence of Candida albicans.";
RL Proc. Natl. Acad. Sci. U.S.A. 101:7329-7334(2004).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=17419877; DOI=10.1186/gb-2007-8-4-r52;
RA van het Hoog M., Rast T.J., Martchenko M., Grindle S., Dignard D.,
RA Hogues H., Cuomo C., Berriman M., Scherer S., Magee B.B., Whiteway M.,
RA Chibana H., Nantel A., Magee P.T.;
RT "Assembly of the Candida albicans genome into sixteen supercontigs aligned
RT on the eight chromosomes.";
RL Genome Biol. 8:RESEARCH52.1-RESEARCH52.12(2007).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND GENOME REANNOTATION.
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=24025428; DOI=10.1186/gb-2013-14-9-r97;
RA Muzzey D., Schwartz K., Weissman J.S., Sherlock G.;
RT "Assembly of a phased diploid Candida albicans genome facilitates allele-
RT specific measurements and provides a simple model for repeat and indel
RT structure.";
RL Genome Biol. 14:RESEARCH97.1-RESEARCH97.14(2013).
CC -!- FUNCTION: Required for 3'-end cleavage and polyadenylation of pre-
CC mRNAs. Also involved in chromosome segregation where it has a role in
CC chromosome attachment to the mitotic spindle (By similarity).
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
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DR EMBL; CP017623; AOW26735.1; -; Genomic_DNA.
DR RefSeq; XP_713912.2; XM_708819.2.
DR AlphaFoldDB; Q59WJ4; -.
DR SMR; Q59WJ4; -.
DR STRING; 237561.Q59WJ4; -.
DR GeneID; 3644415; -.
DR KEGG; cal:CAALFM_C111090CA; -.
DR CGD; CAL0000196733; orf19.9843.
DR VEuPathDB; FungiDB:C1_11090C_A; -.
DR eggNOG; KOG0284; Eukaryota.
DR HOGENOM; CLU_000288_77_1_1; -.
DR InParanoid; Q59WJ4; -.
DR OrthoDB; 604979at2759; -.
DR PRO; PR:Q59WJ4; -.
DR Proteomes; UP000000559; Chromosome 1.
DR GO; GO:0000785; C:chromatin; IEA:EnsemblFungi.
DR GO; GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IBA:GO_Central.
DR GO; GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.
DR GO; GO:0006378; P:mRNA polyadenylation; IBA:GO_Central.
DR Gene3D; 2.130.10.10; -; 3.
DR InterPro; IPR045245; Pfs2-like.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR001680; WD40_repeat.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR PANTHER; PTHR22836; PTHR22836; 1.
DR Pfam; PF00400; WD40; 5.
DR SMART; SM00320; WD40; 7.
DR SUPFAM; SSF50978; SSF50978; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 4.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 3: Inferred from homology;
KW Chromosome partition; mRNA processing; Nucleus; Reference proteome; Repeat;
KW WD repeat.
FT CHAIN 1..543
FT /note="Polyadenylation factor subunit 2"
FT /id="PRO_0000238498"
FT REPEAT 133..172
FT /note="WD 1"
FT REPEAT 175..215
FT /note="WD 2"
FT REPEAT 216..255
FT /note="WD 3"
FT REPEAT 258..297
FT /note="WD 4"
FT REPEAT 300..341
FT /note="WD 5"
FT REPEAT 344..384
FT /note="WD 6"
FT REPEAT 414..453
FT /note="WD 7"
FT REGION 1..31
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 486..543
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..18
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 518..534
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 543 AA; 60961 MW; DABD5DBACC17916F CRC64;
MYRSHNNNNN YHSRNDGSNG RINKPRDPKS QDKYVAYQQN IEQQLASQEK KQAYRRITDH
GNNMGRWYIE KSLGLTNRSQ QAIGTIRPES SYLIDLLPSL AYSSSFNLNR RNNKNNLAVL
DLQTKFVHLS SNKVKHTINT VKWTPEGRRL LVASHSGEFT LWNGMTFNFE TIMQAHESPI
LTMKYSNHDE WLLSGDQNGT VKYWQPNFNN VNNISAHANG VRDIAFSPND SKFLTCGDDS
AIKIWNFNNG KEERTLSGHH WEVKSADWHP NLGLIVSGSK DNLVKLWDPR SANCVSTLHG
FKHTVNKTRF QPNGTARLLA SVSRDRSCRI FDLRTMKDML VIRDSETDLS CVAWHPIHAS
MVTTAAYNGS ISNFLLDSYI PDSNESVPKR SNNNSNLSTN TNNTIDAVQK IPYAHEKAIH
AVEYHPLGHL LCTAGSDKTA RFWSRARPND PMAWKDAVYT DCKAGAWYYS VNNNVNAVME
DPNAVKNEDD EIANNDDPLS NSGRRRGVGA SASGGATGSV PGLRSRNETP NNGSYAIPGL
RGF