PFS2_YARLI
ID PFS2_YARLI Reviewed; 532 AA.
AC Q6CGP9;
DT 30-MAY-2006, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2004, sequence version 1.
DT 25-MAY-2022, entry version 101.
DE RecName: Full=Polyadenylation factor subunit 2;
GN Name=PFS2; OrderedLocusNames=YALI0A17424g;
OS Yarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida lipolytica).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Dipodascaceae; Yarrowia.
OX NCBI_TaxID=284591;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CLIB 122 / E 150;
RX PubMed=15229592; DOI=10.1038/nature02579;
RA Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S., Lafontaine I.,
RA de Montigny J., Marck C., Neuveglise C., Talla E., Goffard N., Frangeul L.,
RA Aigle M., Anthouard V., Babour A., Barbe V., Barnay S., Blanchin S.,
RA Beckerich J.-M., Beyne E., Bleykasten C., Boisrame A., Boyer J.,
RA Cattolico L., Confanioleri F., de Daruvar A., Despons L., Fabre E.,
RA Fairhead C., Ferry-Dumazet H., Groppi A., Hantraye F., Hennequin C.,
RA Jauniaux N., Joyet P., Kachouri R., Kerrest A., Koszul R., Lemaire M.,
RA Lesur I., Ma L., Muller H., Nicaud J.-M., Nikolski M., Oztas S.,
RA Ozier-Kalogeropoulos O., Pellenz S., Potier S., Richard G.-F.,
RA Straub M.-L., Suleau A., Swennen D., Tekaia F., Wesolowski-Louvel M.,
RA Westhof E., Wirth B., Zeniou-Meyer M., Zivanovic Y., Bolotin-Fukuhara M.,
RA Thierry A., Bouchier C., Caudron B., Scarpelli C., Gaillardin C.,
RA Weissenbach J., Wincker P., Souciet J.-L.;
RT "Genome evolution in yeasts.";
RL Nature 430:35-44(2004).
CC -!- FUNCTION: Required for 3'-end cleavage and polyadenylation of pre-
CC mRNAs. Also involved in chromosome segregation where it has a role in
CC chromosome attachment to the mitotic spindle (By similarity).
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
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DR EMBL; CR382127; CAG84095.1; -; Genomic_DNA.
DR RefSeq; XP_500163.1; XM_500163.1.
DR AlphaFoldDB; Q6CGP9; -.
DR SMR; Q6CGP9; -.
DR STRING; 4952.CAG84095; -.
DR EnsemblFungi; CAG84095; CAG84095; YALI0_A17424g.
DR GeneID; 2905837; -.
DR KEGG; yli:YALI0A17424g; -.
DR VEuPathDB; FungiDB:YALI0_A17424g; -.
DR HOGENOM; CLU_000288_77_1_1; -.
DR InParanoid; Q6CGP9; -.
DR OMA; HHWDVKS; -.
DR Proteomes; UP000001300; Chromosome A.
DR GO; GO:0000785; C:chromatin; IEA:EnsemblFungi.
DR GO; GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IBA:GO_Central.
DR GO; GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.
DR GO; GO:0006378; P:mRNA polyadenylation; IBA:GO_Central.
DR Gene3D; 2.130.10.10; -; 3.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR045245; Pfs2-like.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR001680; WD40_repeat.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR PANTHER; PTHR22836; PTHR22836; 1.
DR Pfam; PF00400; WD40; 5.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 7.
DR SUPFAM; SSF50978; SSF50978; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 5.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 3: Inferred from homology;
KW Chromosome partition; mRNA processing; Nucleus; Reference proteome; Repeat;
KW WD repeat.
FT CHAIN 1..532
FT /note="Polyadenylation factor subunit 2"
FT /id="PRO_0000238506"
FT REPEAT 143..182
FT /note="WD 1"
FT REPEAT 185..224
FT /note="WD 2"
FT REPEAT 227..266
FT /note="WD 3"
FT REPEAT 270..309
FT /note="WD 4"
FT REPEAT 312..353
FT /note="WD 5"
FT REPEAT 376..416
FT /note="WD 6"
FT REPEAT 432..471
FT /note="WD 7"
FT REGION 50..72
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 513..532
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 58..72
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 532 AA; 58961 MW; B86FC388ED8302F8 CRC64;
MSSDSGPLHR RTIPISVHIF SGFFYAPFYA PQLTQFIVTI TMYSTYQRPA GYQPRQQPQG
EEDRRPAHRR TVDHGSAFGK WHLDRLSGRT IQPANMRSEQ SYIVDLLPPS AYTNINGSLR
STNPHITSVA ATPAKFIQVA LNKVRHPVYS ATWTPDGRRL LTGSMSGEFT LWNGMTFNFE
SIMQAHESGV RSLKYSHSGE WLLSGDHEGN VKFWQPSLNC VNVIDKAHRE SIRELAFAPS
DHKFVTGSDD GLLKIWDFHE SSNAESVLKG HGWDVKSVDW HSELGLIVSG SKDNLIKLWD
PRSAKNVNTF HGFKNTVMKT TFQPTGTKRL LAAGCRDRTC RILDLRMLNS GSSEAGPTAG
TDMPTRGDRS MAVLRGHDSD VFSLTWHPTH ANVVTSGTKT GSIYTFNVDT TPAGGAYGPD
SGILPVNTIP SAHDYCVSTL DYHPEGHVLC SGGLDRMTRF WARPRPGDPT SFRDKYYEPK
EEGVSVKTLP GVNNATSRAG MARVEHVSTQ HFNTAQPEVT DDEPVSIPGF AR