PGL1_ARATH
ID PGL1_ARATH Reviewed; 622 AA.
AC P92982; Q9S9K5;
DT 22-NOV-2005, integrated into UniProtKB/Swiss-Prot.
DT 22-NOV-2005, sequence version 2.
DT 03-AUG-2022, entry version 106.
DE RecName: Full=Polygalacturonase 1 beta-like protein 1 {ECO:0000303|PubMed:26106400};
DE Short=AtPGL1 {ECO:0000303|PubMed:26106400};
DE AltName: Full=Aromatic-rich glycoprotein JP630;
DE AltName: Full=PG1beta-like protein 1 {ECO:0000303|PubMed:26106400};
DE AltName: Full=Polygalacturonase 3 {ECO:0000303|PubMed:19639386};
DE AltName: Full=Probable polygalacturonase non-catalytic subunit JP630;
DE Flags: Precursor;
GN Name=PGL1 {ECO:0000303|PubMed:26106400};
GN Synonyms=JP630, PG3 {ECO:0000303|PubMed:19639386};
GN OrderedLocusNames=At1g23760 {ECO:0000312|Araport:AT1G23760};
GN ORFNames=F5O8.31 {ECO:0000312|EMBL:AAC98031.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RA Watson C.F., Schuchman D.B., Liu J., Dellapenna D.;
RT "Arabidopsis aromatic rich glycoprotein JP630.";
RL Submitted (MAY-1996) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP DOMAIN.
RX PubMed=9790599; DOI=10.1007/s004380050832;
RA Hattori J., Boutilier K.A., van Lookeren Campagne M.M., Miki B.L.;
RT "A conserved BURP domain defines a novel group of plant proteins with
RT unusual primary structures.";
RL Mol. Gen. Genet. 259:424-428(1998).
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=19639386; DOI=10.1007/s11103-009-9526-6;
RA Van Son L., Tiedemann J., Rutten T., Hillmer S., Hinz G., Zank T.,
RA Manteuffel R., Baeumlein H.;
RT "The BURP domain protein AtUSPL1 of Arabidopsis thaliana is destined to the
RT protein storage vacuoles and overexpression of the cognate gene distorts
RT seed development.";
RL Plant Mol. Biol. 71:319-329(2009).
RN [6]
RP GENE FAMILY, NOMENCLATURE, TISSUE SPECIFICITY, DEVELOPMENTAL STAGE, AND
RP DISRUPTION PHENOTYPE.
RX PubMed=26106400; DOI=10.3389/fpls.2015.00412;
RA Park J., Cui Y., Kang B.H.;
RT "AtPGL3 is an Arabidopsis BURP domain protein that is localized to the cell
RT wall and promotes cell enlargement.";
RL Front. Plant Sci. 6:412-412(2015).
CC -!- FUNCTION: Involved in cell size determination.
CC {ECO:0000250|UniProtKB:P92990}.
CC -!- SUBCELLULAR LOCATION: Secreted, extracellular space, apoplast
CC {ECO:0000250|UniProtKB:P92990}. Secreted, cell wall
CC {ECO:0000250|UniProtKB:P92990}.
CC -!- TISSUE SPECIFICITY: Expressed in flowers and stems.
CC {ECO:0000269|PubMed:26106400}.
CC -!- DEVELOPMENTAL STAGE: Barely detectable in 6 days after-germination
CC (DAG) seedlings, but highly expressed in 14 DAG seedlings.
CC {ECO:0000269|PubMed:26106400}.
CC -!- DOMAIN: The BURP domain located at the C-terminus has not been
CC identified in non-plant proteins. {ECO:0000269|PubMed:9790599}.
CC -!- DISRUPTION PHENOTYPE: No visible phenotype. Atpgl1, atpgl2 and atpgl3
CC triple mutants produce smaller leaves and petioles.
CC {ECO:0000269|PubMed:26106400}.
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DR EMBL; U59467; AAB39538.1; -; mRNA.
DR EMBL; AC005990; AAC98031.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE30429.1; -; Genomic_DNA.
DR PIR; G86371; G86371.
DR RefSeq; NP_173788.1; NM_102224.4.
DR AlphaFoldDB; P92982; -.
DR STRING; 3702.AT1G23760.1; -.
DR PaxDb; P92982; -.
DR PRIDE; P92982; -.
DR ProteomicsDB; 235052; -.
DR EnsemblPlants; AT1G23760.1; AT1G23760.1; AT1G23760.
DR GeneID; 838987; -.
DR Gramene; AT1G23760.1; AT1G23760.1; AT1G23760.
DR KEGG; ath:AT1G23760; -.
DR Araport; AT1G23760; -.
DR TAIR; locus:2034823; AT1G23760.
DR eggNOG; ENOG502QT2V; Eukaryota.
DR HOGENOM; CLU_011822_5_0_1; -.
DR InParanoid; P92982; -.
DR OMA; DQRNFTN; -.
DR OrthoDB; 724379at2759; -.
DR PhylomeDB; P92982; -.
DR PRO; PR:P92982; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; P92982; baseline and differential.
DR Genevisible; P92982; AT.
DR GO; GO:0048046; C:apoplast; IEA:UniProtKB-SubCell.
DR InterPro; IPR004873; BURP_dom.
DR Pfam; PF03181; BURP; 1.
DR SMART; SM01045; BURP; 1.
DR PROSITE; PS51277; BURP; 1.
PE 2: Evidence at transcript level;
KW Apoplast; Cell wall; Glycoprotein; Reference proteome; Repeat; Secreted;
KW Signal.
FT SIGNAL 1..21
FT /evidence="ECO:0000255"
FT CHAIN 22..622
FT /note="Polygalacturonase 1 beta-like protein 1"
FT /id="PRO_0000042951"
FT REPEAT 118..121
FT /note="FXXY 1"
FT /evidence="ECO:0000305"
FT REPEAT 126..129
FT /note="FXXY 2"
FT /evidence="ECO:0000305"
FT REPEAT 140..143
FT /note="FXXY 3"
FT /evidence="ECO:0000305"
FT REPEAT 154..157
FT /note="FXXY 4"
FT /evidence="ECO:0000305"
FT REPEAT 168..171
FT /note="FXXY 5"
FT /evidence="ECO:0000305"
FT REPEAT 182..185
FT /note="FXXY 6"
FT /evidence="ECO:0000305"
FT REPEAT 196..199
FT /note="FXXY 7"
FT /evidence="ECO:0000305"
FT REPEAT 210..213
FT /note="FXXY 8"
FT /evidence="ECO:0000305"
FT REPEAT 224..227
FT /note="FXXY 9"
FT /evidence="ECO:0000305"
FT REPEAT 239..242
FT /note="FXXY 10"
FT /evidence="ECO:0000305"
FT REPEAT 253..256
FT /note="FXXY 11"
FT /evidence="ECO:0000305"
FT REPEAT 267..270
FT /note="FXXY 12"
FT /evidence="ECO:0000305"
FT REPEAT 281..284
FT /note="FXXY 13"
FT /evidence="ECO:0000305"
FT REPEAT 295..298
FT /note="FXXY 14"
FT /evidence="ECO:0000305"
FT REPEAT 309..312
FT /note="FXXY 15"
FT /evidence="ECO:0000305"
FT REPEAT 323..326
FT /note="FXXY 16"
FT /evidence="ECO:0000305"
FT REPEAT 337..340
FT /note="FXXY 17"
FT /evidence="ECO:0000305"
FT REPEAT 351..354
FT /note="FXXY 18"
FT /evidence="ECO:0000305"
FT REPEAT 365..368
FT /note="FXXY 19"
FT /evidence="ECO:0000305"
FT REPEAT 374..377
FT /note="FXXY 20"
FT /evidence="ECO:0000305"
FT REPEAT 384..387
FT /note="FXXY 21"
FT /evidence="ECO:0000305"
FT DOMAIN 407..621
FT /note="BURP"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00604"
FT CARBOHYD 125
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 278
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 371
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 388
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 461
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CONFLICT 378
FT /note="T -> A (in Ref. 1; AAB39538)"
FT /evidence="ECO:0000305"
FT CONFLICT 436
FT /note="R -> C (in Ref. 1; AAB39538)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 622 AA; 68229 MW; AFE8974DACC251EA CRC64;
MRKQFVFLLP FLSRLYHVVI AGGERLTNGG FSPEINPFTP KASLVRYWNK QIHHQSPGSA
FLLSKASPLT AVASATFAKL ASENALPDRL PDFCSAANLF CFPDLGPTLE KHSNDVKFSV
YDQRNFTNYG TIHPGGADSF KKYSQNGNAV TDSFRRYSRD AAGHEDKFTG YADNSNVVEE
KFNSYGTSAT GGSGDFKNYQ SGVNNPTTRF KAYSDEGNGR AQTFKTYTHE ANSGPGQSFT
SYGKNGNGAP NEFSSYGVSS NVIGSDFSNY GENGNAANDT FKGYGGDGNV PQNNFKSYGA
SGNAAVDTFL NYRDNANVGD DSFSSYAKNS NFEKVDFVNY GKSINPGSES FSGYGKGAEG
NKIDFKTYTQ NSTFKDYTKT GVEFAKYNRS SLGGGKTVNK WVEPGKFFRE SMLKEGTLIW
MPDIKDKMPK RSFLPRSIVS KLPFSTSKIA EIKRVFHAND NSTMEGIITD AVRECERPPT
VSETKRCVGS AEDMIDFATS VLGRSVVLRT TESVAGSKEK VMIGKVNGIN GGRVTKSVSC
HQSLYPYLLY YCHSVPKVRV YESDLLDPKS KAKINHGIAI CHMDTSAWGA NHGAFMLLGS
RPGQIEVCHW IFENDMNWAI AD
