PGLR_RHIRD
ID PGLR_RHIRD Reviewed; 312 AA.
AC P27644;
DT 01-AUG-1992, integrated into UniProtKB/Swiss-Prot.
DT 01-AUG-1992, sequence version 1.
DT 03-AUG-2022, entry version 88.
DE RecName: Full=Polygalacturonase;
DE EC=3.2.1.15;
DE AltName: Full=PGL;
DE AltName: Full=Pectinase;
GN Name=pgl;
OS Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium
OS radiobacter).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium;
OC Agrobacterium tumefaciens complex.
OX NCBI_TaxID=358;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=A136;
RX PubMed=1860822; DOI=10.1128/jb.173.16.5110-5120.1991;
RA Rong L., Karcher S.J., Gelvin S.B.;
RT "Genetic and molecular analyses of picA, a plant-inducible locus on the
RT Agrobacterium tumefaciens chromosome.";
RL J. Bacteriol. 173:5110-5120(1991).
CC -!- FUNCTION: Seems to regulate the surface properties of the bacterium in
CC the presence of plant cells or plant cell extracts.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(1,4-alpha-D-galacturonosyl)n+m + H2O = (1,4-alpha-D-
CC galacturonosyl)n + (1,4-alpha-D-galacturonosyl)m.; EC=3.2.1.15;
CC -!- SUBCELLULAR LOCATION: Secreted.
CC -!- INDUCTION: By certain acidic polysaccharides found in carrot root
CC extract.
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 28 family. {ECO:0000305}.
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DR EMBL; M62814; AAA22102.1; -; Genomic_DNA.
DR PIR; A40364; A40364.
DR AlphaFoldDB; P27644; -.
DR SMR; P27644; -.
DR CAZy; GH28; Glycoside Hydrolase Family 28.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0004650; F:polygalacturonase activity; IEA:UniProtKB-EC.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR Gene3D; 2.160.20.10; -; 1.
DR InterPro; IPR000743; Glyco_hydro_28.
DR InterPro; IPR006626; PbH1.
DR InterPro; IPR012334; Pectin_lyas_fold.
DR InterPro; IPR011050; Pectin_lyase_fold/virulence.
DR Pfam; PF00295; Glyco_hydro_28; 1.
DR SMART; SM00710; PbH1; 4.
DR SUPFAM; SSF51126; SSF51126; 1.
DR PROSITE; PS00502; POLYGALACTURONASE; 1.
PE 2: Evidence at transcript level;
KW Cell wall biogenesis/degradation; Glycosidase; Hydrolase; Repeat; Secreted.
FT CHAIN 1..312
FT /note="Polygalacturonase"
FT /id="PRO_0000215228"
FT REPEAT 80..101
FT /note="PbH1 1"
FT /evidence="ECO:0000255"
FT REPEAT 116..137
FT /note="PbH1 2"
FT /evidence="ECO:0000255"
FT REPEAT 143..164
FT /note="PbH1 3"
FT /evidence="ECO:0000255"
FT REPEAT 222..245
FT /note="PbH1 4"
FT /evidence="ECO:0000255"
FT ACT_SITE 94
FT /note="Proton donor"
FT /evidence="ECO:0000250|UniProtKB:O74213"
FT ACT_SITE 130
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10052"
SQ SEQUENCE 312 AA; 32943 MW; 37B03C2EE29F23AB CRC64;
MALATRATGG AGRRKPVRAR CARGLHLVSC HKTQLLGFTI RNAASWTIHP QGCEDLTAAA
STIIAPHDSP NTDGFNPESC RNVMISGVRF SVGDDCIAVK AGKRGPDGED DHLAETRGIT
VRHCLMQPGH GGLVIGSEMS GGVHDVTVED CDMIGTDRGL RLKTGARSGG GMVGNITMRR
VLLDGVQTAL SANAHYHCDA DGHDDWVQSR NPAPVNDGTP FVDGITVEDV EIRNLAHAAG
VFLGLPDVPS ATSLSATSPI VSHDPSAVAT PPIMADRVRP MRMRLVFEQA DVVCDDPALL
NDAPVSISSY FD