PHB_RALPI
ID PHB_RALPI Reviewed; 488 AA.
AC P12625;
DT 01-OCT-1989, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-1989, sequence version 1.
DT 25-MAY-2022, entry version 107.
DE RecName: Full=Poly(3-hydroxybutyrate) depolymerase;
DE Short=PHB depolymerase;
DE EC=3.1.1.75;
DE Flags: Precursor;
OS Ralstonia pickettii (Burkholderia pickettii).
OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC Burkholderiaceae; Ralstonia.
OX NCBI_TaxID=329;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=T1;
RX PubMed=2644188; DOI=10.1128/jb.171.1.184-189.1989;
RA Saito T., Suzuki K., Yamamoto J., Fukui T., Miwa K., Tomita K.,
RA Nakanishi S., Odani S., Suzuki J., Ishikawa K.;
RT "Cloning, nucleotide sequence, and expression in Escherichia coli of the
RT gene for poly(3-hydroxybutyrate) depolymerase from Alcaligenes faecalis.";
RL J. Bacteriol. 171:184-189(1989).
RN [2]
RP DOMAIN FIBRONECTIN TYPE-III.
RX PubMed=1409594; DOI=10.1073/pnas.89.19.8990;
RA Bork P., Doolittle R.F.;
RT "Proposed acquisition of an animal protein domain by bacteria.";
RL Proc. Natl. Acad. Sci. U.S.A. 89:8990-8994(1992).
CC -!- FUNCTION: This protein degrades water-insoluble and water-soluble PHB
CC to monomeric D(-)-3-hydroxybutyrate.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=[(3R)-hydroxybutanoate](n) + H2O = (3R)-hydroxybutanoate dimer
CC + [(3R)-hydroxybutanoate](n-2) + H(+); Xref=Rhea:RHEA:56392,
CC Rhea:RHEA-COMP:14464, Rhea:RHEA-COMP:14519, ChEBI:CHEBI:8298,
CC ChEBI:CHEBI:10979, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378; EC=3.1.1.75;
CC -!- CATALYTIC ACTIVITY:
CC Reaction=[(3R)-hydroxybutanoate](n) + H2O = (3R)-hydroxybutanoate
CC trimer + [(3R)-hydroxybutanoate](n-3) + H(+); Xref=Rhea:RHEA:56396,
CC Rhea:RHEA-COMP:14464, Rhea:RHEA-COMP:14520, ChEBI:CHEBI:8298,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:140385;
CC EC=3.1.1.75;
CC -!- CATALYTIC ACTIVITY:
CC Reaction=[(3R)-hydroxybutanoate](n) + H2O = (R)-3-hydroxybutanoate +
CC [(3R)-hydroxybutanoate](n-1) + H(+); Xref=Rhea:RHEA:11248, Rhea:RHEA-
CC COMP:14464, Rhea:RHEA-COMP:14518, ChEBI:CHEBI:8298,
CC ChEBI:CHEBI:10983, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378; EC=3.1.1.75;
CC -!- CATALYTIC ACTIVITY:
CC Reaction=[(3R)-hydroxybutanoate](n) + H2O = (3R)-hydroxybutanoate
CC pentamer + [(3R)-hydroxybutanoate](n-5) + H(+); Xref=Rhea:RHEA:56404,
CC Rhea:RHEA-COMP:14464, Rhea:RHEA-COMP:14522, ChEBI:CHEBI:8298,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:140383;
CC EC=3.1.1.75;
CC -!- CATALYTIC ACTIVITY:
CC Reaction=[(3R)-hydroxybutanoate](n) + H2O = (3R)-hydroxybutanoate
CC tetramer + [(3R)-hydroxybutanoate](n-4) + H(+); Xref=Rhea:RHEA:56400,
CC Rhea:RHEA-COMP:14464, Rhea:RHEA-COMP:14521, ChEBI:CHEBI:8298,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:140384;
CC EC=3.1.1.75;
CC -!- SUBCELLULAR LOCATION: Secreted.
CC -!- SIMILARITY: Belongs to the AB hydrolase superfamily. Lipase family.
CC {ECO:0000305}.
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DR EMBL; J04223; AAA21974.1; -; Genomic_DNA.
DR PIR; A32235; A32235.
DR AlphaFoldDB; P12625; -.
DR SMR; P12625; -.
DR ESTHER; alcfa-phb; Esterase_phb.
DR BRENDA; 3.1.1.75; 5160.
DR SABIO-RK; P12625; -.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0050526; F:poly(3-hydroxybutyrate) depolymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0016042; P:lipid catabolic process; IEA:UniProtKB-KW.
DR CDD; cd00063; FN3; 1.
DR Gene3D; 2.60.40.10; -; 1.
DR Gene3D; 3.40.50.1820; -; 1.
DR InterPro; IPR029058; AB_hydrolase.
DR InterPro; IPR010126; Esterase_phb.
DR InterPro; IPR003961; FN3_dom.
DR InterPro; IPR036116; FN3_sf.
DR InterPro; IPR013783; Ig-like_fold.
DR Pfam; PF10503; Esterase_PHB; 1.
DR SMART; SM00060; FN3; 1.
DR SUPFAM; SSF49265; SSF49265; 1.
DR SUPFAM; SSF53474; SSF53474; 2.
DR TIGRFAMs; TIGR01840; esterase_phb; 1.
DR PROSITE; PS50853; FN3; 1.
PE 3: Inferred from homology;
KW Hydrolase; Lipid degradation; Lipid metabolism; Secreted; Signal.
FT SIGNAL 1..27
FT CHAIN 28..488
FT /note="Poly(3-hydroxybutyrate) depolymerase"
FT /id="PRO_0000017727"
FT DOMAIN 346..428
FT /note="Fibronectin type-III"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00316"
FT ACT_SITE 166
FT /note="Charge relay system"
FT /evidence="ECO:0000250"
SQ SEQUENCE 488 AA; 49935 MW; FE6E2BCA97C135EF CRC64;
MVRRLWRRIA GWLAACVAIL CAFPLHAATA GPGAWSSQQT WAADSVNGGN LTGYFYWPAS
QPTTPNGKRA LVLVLHGCVQ TASGDVIDNA NGAGFNWKSV ADQYGAVILA PNATGNVYSN
HCWDYANASP SRTAGHVGVL LDLVNRFVTN SQYAIDPNQV YVAGLSSGGG MTMVLGCIAP
DIFAGIGINA GPPPGTTTAQ IGYVPSGFTA TTAANKCNAW AGSNAGKFST QIAGAVWGTS
DYTVAQAYGP MDAAAMRLVY GGNFTQGSQV SISGGGTNTP YTDSNGKVRT HEISVSGMAH
AWPAGTGGDN TNYVDATHIN YPVFVMDYWV KNNLRAGSGT GQAGSAPTGL AVTATTSTSV
SLSWNAVANA SSYGVYRNGS KVGSATATAY TDSGLIAGTT YSYTVTAVDP TAGESQPSAA
VSATTKSAFT CTATTASNYA HVQAGRAHDS GGIAYANGSN QSMGLDNLFY TSTLAQTAAG
YYIVGNCP