PHF10_XENLA
ID PHF10_XENLA Reviewed; 506 AA.
AC Q63ZP1;
DT 26-APR-2005, integrated into UniProtKB/Swiss-Prot.
DT 18-MAY-2010, sequence version 2.
DT 03-AUG-2022, entry version 78.
DE RecName: Full=PHD finger protein 10;
GN Name=phf10;
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Involved in transcription activity regulation by chromatin
CC remodeling in the context of the neural progenitors-specific chromatin
CC remodeling complex (npBAF complex). May play a role in the
CC proliferation of neural progenitors (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Component of neural progenitors-specific chromatin remodeling
CC complex (npBAF complex), a subfamily of ATP-dependent SWI/SNF chromatin
CC remodeling complexes. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the SAYP family. {ECO:0000305}.
CC -!- CAUTION: It is uncertain whether Met-1 or Met-90 is the initiator.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAH82869.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR EMBL; BC082869; AAH82869.1; ALT_INIT; mRNA.
DR RefSeq; NP_001088070.2; NM_001094601.1.
DR AlphaFoldDB; Q63ZP1; -.
DR SMR; Q63ZP1; -.
DR DNASU; 494765; -.
DR GeneID; 494765; -.
DR KEGG; xla:494765; -.
DR CTD; 494765; -.
DR Xenbase; XB-GENE-940964; phf10.S.
DR OrthoDB; 708781at2759; -.
DR Proteomes; UP000186698; Chromosome 5S.
DR Bgee; 494765; Expressed in neurula embryo and 19 other tissues.
DR GO; GO:0071564; C:npBAF complex; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0007399; P:nervous system development; IEA:UniProtKB-KW.
DR Gene3D; 3.30.40.10; -; 1.
DR InterPro; IPR038045; PHF10.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR10615:SF174; PTHR10615:SF174; 1.
DR Pfam; PF00628; PHD; 1.
DR SMART; SM00249; PHD; 2.
DR SUPFAM; SSF57903; SSF57903; 2.
DR PROSITE; PS01359; ZF_PHD_1; 1.
DR PROSITE; PS50016; ZF_PHD_2; 2.
PE 2: Evidence at transcript level;
KW Metal-binding; Neurogenesis; Nucleus; Reference proteome; Repeat;
KW Transcription; Transcription regulation; Zinc; Zinc-finger.
FT CHAIN 1..506
FT /note="PHD finger protein 10"
FT /id="PRO_0000059300"
FT ZN_FING 387..444
FT /note="PHD-type 1; degenerate"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00146"
FT ZN_FING 446..489
FT /note="PHD-type 2; degenerate"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00146"
FT REGION 1..66
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 90..299
FT /note="SAY"
FT REGION 293..377
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 26..47
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 48..66
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 308..322
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 323..347
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 348..369
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 506 AA; 57328 MW; 06EE16AD1117787B CRC64;
MAAVVSAKPL CDSEPAIPAP PSVKEDNSND TKDPEENSND GSQPAKRRRM SGDSTPSCEN
SNQDFGSSYF PAENVIEYKW PPDETGEYYM LQEQVSEYLG VTSFKRKYPD LERRDLSHKE
KLYLRELNVI TETQCTLGLT ALRSDEVIDL MIKEYPAKHA EYSVILQEKE RQRITDHYKE
YSQLQQQNTQ KVEAGKVPEY IKKAAKKAAE FNSNLNRERM EERRAYFDLQ THIIQVPQGK
YKILPSEMTK VSPYPVSLIP GQFQEYYKRY SPNELRYLPL NTALYEPPLD PLDPELLALD
SDGDSDEVEE MKSEKKKTKG SSVRLSIDSS SMNMSESDNT QDTQEETPQP RPKVKEKSST
PRKEGSKRSV LSKSVSGYKP KSIPNAICGI CLKGKDANKK GRSERLIHCS QCDNSGHPSC
LDMSAELVAV IKKYPWQCME CKTCIICGQP HHEEEMMFCD TCDRGYHTFC VGLGALPSGR
WICDCCQKVP ATPKKGARKV KNSKEG