位置:首页 > 蛋白库 > PHNM_ECOLI
PHNM_ECOLI
ID   PHNM_ECOLI              Reviewed;         378 AA.
AC   P16689; Q2M6K8;
DT   01-AUG-1990, integrated into UniProtKB/Swiss-Prot.
DT   01-NOV-1991, sequence version 2.
DT   03-AUG-2022, entry version 156.
DE   RecName: Full=Alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase;
DE            Short=RPnTP diphosphatase;
DE            EC=3.6.1.63;
GN   Name=phnM; OrderedLocusNames=b4095, JW4056;
OS   Escherichia coli (strain K12).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Enterobacteriaceae; Escherichia.
OX   NCBI_TaxID=83333;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC   STRAIN=B;
RX   PubMed=2155230; DOI=10.1016/s0021-9258(19)39587-0;
RA   Chen C.-M., Ye Q.-Z., Zhu Z., Wanner B.L., Walsh C.T.;
RT   "Molecular biology of carbon-phosphorus bond cleavage. Cloning and
RT   sequencing of the phn (psiD) genes involved in alkylphosphonate uptake and
RT   C-P lyase activity in Escherichia coli B.";
RL   J. Biol. Chem. 265:4461-4471(1990).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC   STRAIN=K12;
RX   PubMed=1840580; DOI=10.1128/jb.173.8.2665-2672.1991;
RA   Makino K., Kim S.K., Shinagawa H., Amemura M., Nakata A.;
RT   "Molecular analysis of the cryptic and functional phn operons for
RT   phosphonate use in Escherichia coli K-12.";
RL   J. Bacteriol. 173:2665-2672(1991).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=K12 / MG1655 / ATCC 47076;
RX   PubMed=7610040; DOI=10.1093/nar/23.12.2105;
RA   Burland V.D., Plunkett G. III, Sofia H.J., Daniels D.L., Blattner F.R.;
RT   "Analysis of the Escherichia coli genome VI: DNA sequence of the region
RT   from 92.8 through 100 minutes.";
RL   Nucleic Acids Res. 23:2105-2119(1995).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=K12 / MG1655 / ATCC 47076;
RX   PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA   Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA   Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA   Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA   Shao Y.;
RT   "The complete genome sequence of Escherichia coli K-12.";
RL   Science 277:1453-1462(1997).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX   PubMed=16738553; DOI=10.1038/msb4100049;
RA   Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA   Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT   "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT   and W3110.";
RL   Mol. Syst. Biol. 2:E1-E5(2006).
RN   [6]
RP   FUNCTION, CATALYTIC ACTIVITY, AND BIOPHYSICOCHEMICAL PROPERTIES.
RC   STRAIN=K12;
RX   PubMed=22089136; DOI=10.1038/nature10622;
RA   Kamat S.S., Williams H.J., Raushel F.M.;
RT   "Intermediates in the transformation of phosphonates to phosphate by
RT   bacteria.";
RL   Nature 480:570-573(2011).
CC   -!- FUNCTION: Catalyzes the hydrolysis of alpha-D-ribose 1-
CC       methylphosphonate triphosphate (RPnTP) to form alpha-D-ribose 1-
CC       methylphosphonate phosphate (PRPn) and diphosphate.
CC       {ECO:0000269|PubMed:22089136}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=alpha-D-ribose 1-methylphosphonate 5-triphosphate + H2O =
CC         alpha-D-ribose 1-methylphosphonate 5-phosphate + diphosphate + H(+);
CC         Xref=Rhea:RHEA:34683, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378,
CC         ChEBI:CHEBI:33019, ChEBI:CHEBI:68686, ChEBI:CHEBI:68823; EC=3.6.1.63;
CC         Evidence={ECO:0000269|PubMed:22089136};
CC   -!- BIOPHYSICOCHEMICAL PROPERTIES:
CC       Kinetic parameters:
CC         KM=56 uM for alpha-D-ribose 1-methylphosphonate 5-triphosphate
CC         {ECO:0000269|PubMed:22089136};
CC         KM=98 uM for D-ribose-5-triphosphate {ECO:0000269|PubMed:22089136};
CC         KM=200 uM for D-ribose-5-diphosphate {ECO:0000269|PubMed:22089136};
CC   -!- MISCELLANEOUS: The sequence shown is that of strain K12.
CC   -!- SIMILARITY: Belongs to the metallo-dependent hydrolases superfamily.
CC       {ECO:0000305}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; J05260; AAA24352.1; -; Genomic_DNA.
DR   EMBL; D90227; BAA14273.1; -; Genomic_DNA.
DR   EMBL; U14003; AAA96994.1; -; Genomic_DNA.
DR   EMBL; U00096; AAC77056.1; -; Genomic_DNA.
DR   EMBL; AP009048; BAE78098.1; -; Genomic_DNA.
DR   PIR; S56323; S56323.
DR   RefSeq; NP_418519.1; NC_000913.3.
DR   RefSeq; WP_000586325.1; NZ_SSZK01000016.1.
DR   AlphaFoldDB; P16689; -.
DR   SMR; P16689; -.
DR   BioGRID; 4262021; 11.
DR   STRING; 511145.b4095; -.
DR   PaxDb; P16689; -.
DR   PRIDE; P16689; -.
DR   EnsemblBacteria; AAC77056; AAC77056; b4095.
DR   EnsemblBacteria; BAE78098; BAE78098; BAE78098.
DR   GeneID; 948613; -.
DR   KEGG; ecj:JW4056; -.
DR   KEGG; eco:b4095; -.
DR   PATRIC; fig|1411691.4.peg.2605; -.
DR   EchoBASE; EB0716; -.
DR   eggNOG; COG3454; Bacteria.
DR   HOGENOM; CLU_060303_1_0_6; -.
DR   InParanoid; P16689; -.
DR   OMA; MSLMDHT; -.
DR   PhylomeDB; P16689; -.
DR   BioCyc; EcoCyc:EG10722-MON; -.
DR   BioCyc; MetaCyc:EG10722-MON; -.
DR   SABIO-RK; P16689; -.
DR   PRO; PR:P16689; -.
DR   Proteomes; UP000000318; Chromosome.
DR   Proteomes; UP000000625; Chromosome.
DR   GO; GO:0016810; F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds; IEA:InterPro.
DR   GO; GO:0019700; P:organic phosphonate catabolic process; IMP:EcoCyc.
DR   CDD; cd01306; PhnM; 1.
DR   InterPro; IPR013108; Amidohydro_3.
DR   InterPro; IPR011059; Metal-dep_hydrolase_composite.
DR   InterPro; IPR032466; Metal_Hydrolase.
DR   InterPro; IPR012696; PhnM.
DR   Pfam; PF07969; Amidohydro_3; 1.
DR   PIRSF; PIRSF038971; PhnM; 1.
DR   SUPFAM; SSF51338; SSF51338; 1.
DR   SUPFAM; SSF51556; SSF51556; 1.
DR   TIGRFAMs; TIGR02318; phosphono_phnM; 1.
PE   1: Evidence at protein level;
KW   Hydrolase; Reference proteome.
FT   CHAIN           1..378
FT                   /note="Alpha-D-ribose 1-methylphosphonate 5-triphosphate
FT                   diphosphatase"
FT                   /id="PRO_0000058399"
FT   VARIANT         318
FT                   /note="Q -> E (in strain: B)"
SQ   SEQUENCE   378 AA;  42010 MW;  28CC9C5C77EAD37D CRC64;
     MIINNVKLVL ENEVVSGSLE VQNGEIRAFA ESQSRLPEAM DGEGGWLLPG LIELHTDNLD
     KFFTPRPKVD WPAHSAMSSH DALMVASGIT TVLDAVAIGD VRDGGDRLEN LEKMINAIEE
     TQKRGVNRAE HRLHLRCELP HHTTLPLFEK LVQREPVTLV SLMDHSPGQR QFANREKYRE
     YYQGKYSLTD AQMQQYEEEQ LALAARWSQP NRESIAALCR ARKIALASHD DATHAHVAES
     HQLGSVIAEF PTTFEAAEAS RKHGMNVLMG APNIVRGGSH SGNVAASELA QLGLLDILSS
     DYYPASLLDA AFRVADDQSN RFTLPQAVKL VTKNPAQALN LQDRGVIGEG KRADLVLAHR
     KDNHIHIDHV WRQGKRVF
 
 
维奥蛋白资源库 - 中文蛋白资源 CopyRight © 2010-2024