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PHOSP_VSIVA
ID   PHOSP_VSIVA             Reviewed;         265 AA.
AC   P03520;
DT   21-JUL-1986, integrated into UniProtKB/Swiss-Prot.
DT   01-NOV-1995, sequence version 2.
DT   29-SEP-2021, entry version 110.
DE   RecName: Full=Phosphoprotein;
DE            Short=P protein;
DE   AltName: Full=Protein M1;
GN   Name=P;
OS   Vesicular stomatitis Indiana virus (strain San Juan) (VSIV).
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina;
OC   Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae;
OC   Vesiculovirus.
OX   NCBI_TaxID=11285;
OH   NCBI_TaxID=7158; Aedes.
OH   NCBI_TaxID=9913; Bos taurus (Bovine).
OH   NCBI_TaxID=58271; Culicoides.
OH   NCBI_TaxID=9793; Equus asinus (Donkey) (Equus africanus asinus).
OH   NCBI_TaxID=9796; Equus caballus (Horse).
OH   NCBI_TaxID=9606; Homo sapiens (Human).
OH   NCBI_TaxID=252607; Lutzomyia.
OH   NCBI_TaxID=7370; Musca domestica (House fly).
OH   NCBI_TaxID=7190; Simuliidae (black flies).
OH   NCBI_TaxID=9823; Sus scrofa (Pig).
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX   PubMed=6268841; DOI=10.1128/jvi.39.2.529-535.1981;
RA   Gallione C.J., Greene J.R., Iverson L.E., Rose J.K.;
RT   "Nucleotide sequences of the mRNA's encoding the vesicular stomatitis virus
RT   N and NS proteins.";
RL   J. Virol. 39:529-535(1981).
RN   [2]
RP   INTERACTION WITH N.
RX   PubMed=3016338; DOI=10.1128/jvi.59.3.751-754.1986;
RA   Davis N.L., Arnheiter H., Wertz G.W.;
RT   "Vesicular stomatitis virus N and NS proteins form multiple complexes.";
RL   J. Virol. 59:751-754(1986).
RN   [3]
RP   FUNCTION, AND INTERACTION WITH N AND L.
RX   PubMed=2845648; DOI=10.1016/0042-6822(88)90505-3;
RA   Paul P.R., Chattopadhyay D., Banerjee A.K.;
RT   "The functional domains of the phosphoprotein (NS) of vesicular stomatitis
RT   virus (Indiana serotype).";
RL   Virology 166:350-357(1988).
RN   [4]
RP   PHOSPHORYLATION AT SER-60; THR-62 AND SER-64.
RX   PubMed=8525614; DOI=10.1006/viro.1995.9941;
RA   Jackson R.L., Spadafora D., Perrault J.;
RT   "Hierarchal constitutive phosphorylation of the vesicular stomatitis virus
RT   P protein and lack of effect on P1 to P2 conversion.";
RL   Virology 214:189-197(1995).
RN   [5]
RP   FUNCTION.
RX   PubMed=8676480; DOI=10.1128/jvi.70.7.4538-4548.1996;
RA   Spadafora D., Canter D.M., Jackson R.L., Perrault J.;
RT   "Constitutive phosphorylation of the vesicular stomatitis virus P protein
RT   modulates polymerase complex formation but is not essential for
RT   transcription or replication.";
RL   J. Virol. 70:4538-4548(1996).
RN   [6]
RP   FUNCTION.
RX   PubMed=15163735; DOI=10.1128/jvi.78.12.6420-6430.2004;
RA   Das S.C., Pattnaik A.K.;
RT   "Phosphorylation of vesicular stomatitis virus phosphoprotein P is
RT   indispensable for virus growth.";
RL   J. Virol. 78:6420-6430(2004).
RN   [7]
RP   FUNCTION.
RX   PubMed=15956555; DOI=10.1128/jvi.79.13.8101-8112.2005;
RA   Das S.C., Pattnaik A.K.;
RT   "Role of the hypervariable hinge region of phosphoprotein P of vesicular
RT   stomatitis virus in viral RNA synthesis and assembly of infectious virus
RT   particles.";
RL   J. Virol. 79:8101-8112(2005).
RN   [8]
RP   INTERACTION WITH N.
RX   PubMed=21207454; DOI=10.1002/pro.587;
RA   Leyrat C., Jensen M.R., Ribeiro E.A. Jr., Gerard F.C., Ruigrok R.W.,
RA   Blackledge M., Jamin M.;
RT   "The N(0)-binding region of the vesicular stomatitis virus phosphoprotein
RT   is globally disordered but contains transient alpha-helices.";
RL   Protein Sci. 20:542-556(2011).
RN   [9]
RP   PHOSPHORYLATION AT TYR-14.
RX   PubMed=24257610; DOI=10.1128/jvi.02384-13;
RA   Mondal A., Victor K.G., Pudupakam R.S., Lyons C.E., Wertz G.W.;
RT   "Newly identified phosphorylation site in the vesicular stomatitis virus P
RT   protein is required for viral RNA synthesis.";
RL   J. Virol. 88:1461-1472(2014).
RN   [10]
RP   STRUCTURE BY NMR OF 195-265.
RX   PubMed=18657547; DOI=10.1016/j.jmb.2008.07.028;
RA   Ribeiro E.A. Jr., Favier A., Gerard F.C., Leyrat C., Brutscher B.,
RA   Blondel D., Ruigrok R.W., Blackledge M., Jamin M.;
RT   "Solution structure of the C-terminal nucleoprotein-RNA binding domain of
RT   the vesicular stomatitis virus phosphoprotein.";
RL   J. Mol. Biol. 382:525-538(2008).
CC   -!- FUNCTION: Essential component of the RNA polymerase transcription and
CC       replication complex. Binds the viral ribonucleocapsid and positions the
CC       L polymerase on the template. May act as a chaperone for newly
CC       synthesized free N protein, so-called N(0). Plays a role in virion
CC       assembly. {ECO:0000269|PubMed:15163735, ECO:0000269|PubMed:15956555,
CC       ECO:0000269|PubMed:2845648, ECO:0000269|PubMed:8676480}.
CC   -!- SUBUNIT: Homotrimer when phosphorylated in domain I. This trimer is
CC       stabilized by binding to the L protein (PubMed:2845648). Binds N(0),
CC       and N in ribonucleocapsid (PubMed:2845648).
CC       {ECO:0000269|PubMed:21207454, ECO:0000269|PubMed:2845648}.
CC   -!- SUBCELLULAR LOCATION: Virion. Host cytoplasm.
CC   -!- DOMAIN: Sequences comparison studies have defined several domains.
CC       Domain I binds the protein L, contains phosphorylation sites required
CC       for trimerization and is involved in transcription. Hinge region is
CC       highly variable and may act as a spacer between domain I and II. Domain
CC       II is also phosphorylated, binds protein L, and plays a role in
CC       replication. Domain III is basic and essential for binding the N-RNA
CC       template.
CC   -!- PTM: Domain I is phosphorylated by host CK2. Domain II is
CC       phosphorylated by other unknown kinases. Phosphorylation play an
CC       important role in facilitating trimerization and possibly P-L complex
CC       formation (By similarity). {ECO:0000250}.
CC   -!- SIMILARITY: Belongs to the vesiculovirus protein P family.
CC       {ECO:0000305}.
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DR   EMBL; J02428; AAA48368.1; -; Genomic_RNA.
DR   RefSeq; NP_041713.1; NC_001560.1.
DR   PDB; 2K47; NMR; -; A=195-265.
DR   PDB; 6U1X; EM; 3.00 A; P=1-265.
DR   PDBsum; 2K47; -.
DR   PDBsum; 6U1X; -.
DR   SMR; P03520; -.
DR   IntAct; P03520; 1.
DR   iPTMnet; P03520; -.
DR   DNASU; 1489832; -.
DR   GeneID; 1489832; -.
DR   KEGG; vg:1489832; -.
DR   EvolutionaryTrace; P03520; -.
DR   Proteomes; UP000002327; Genome.
DR   GO; GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0003968; F:RNA-directed 5'-3' RNA polymerase activity; IEA:InterPro.
DR   GO; GO:0016310; P:phosphorylation; IDA:UniProtKB.
DR   GO; GO:0019079; P:viral genome replication; IDA:UniProtKB.
DR   GO; GO:0019083; P:viral transcription; IDA:UniProtKB.
DR   DisProt; DP01391; -.
DR   Gene3D; 1.10.8.440; -; 1.
DR   InterPro; IPR043036; Phosphoprotein_C_viral.
DR   InterPro; IPR037263; Phosphoprotein_central.
DR   SUPFAM; SSF160892; SSF160892; 1.
PE   1: Evidence at protein level;
KW   3D-structure; Chaperone; Host cytoplasm; Phosphoprotein;
KW   Reference proteome; Viral RNA replication; Viral transcription; Virion.
FT   CHAIN           1..265
FT                   /note="Phosphoprotein"
FT                   /id="PRO_0000222838"
FT   REGION          1..137
FT                   /note="Domain I"
FT   REGION          1..60
FT                   /note="Disordered"
FT                   /evidence="ECO:0000269|PubMed:21207454"
FT   REGION          150..210
FT                   /note="Hinge"
FT   REGION          211..244
FT                   /note="Domain II"
FT   REGION          245..265
FT                   /note="Domain III:"
FT   COMPBIAS        35..54
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   MOD_RES         14
FT                   /note="Phosphotyrosine; by host"
FT                   /evidence="ECO:0000269|PubMed:24257610"
FT   MOD_RES         60
FT                   /note="Phosphoserine; by host CK2"
FT                   /evidence="ECO:0000269|PubMed:8525614"
FT   MOD_RES         62
FT                   /note="Phosphothreonine; by host CK2"
FT                   /evidence="ECO:0000269|PubMed:8525614"
FT   MOD_RES         64
FT                   /note="Phosphoserine; by host CK2"
FT                   /evidence="ECO:0000269|PubMed:8525614"
FT   MOD_RES         226
FT                   /note="Phosphoserine; by host"
FT                   /evidence="ECO:0000250"
FT   MOD_RES         227
FT                   /note="Phosphoserine; by host"
FT                   /evidence="ECO:0000250"
FT   STRAND          97..99
FT                   /evidence="ECO:0007829|PDB:6U1X"
FT   TURN            197..200
FT                   /evidence="ECO:0007829|PDB:2K47"
FT   STRAND          204..214
FT                   /evidence="ECO:0007829|PDB:2K47"
FT   STRAND          217..221
FT                   /evidence="ECO:0007829|PDB:2K47"
FT   HELIX           222..224
FT                   /evidence="ECO:0007829|PDB:2K47"
FT   HELIX           228..235
FT                   /evidence="ECO:0007829|PDB:2K47"
FT   HELIX           243..253
FT                   /evidence="ECO:0007829|PDB:2K47"
FT   HELIX           256..262
FT                   /evidence="ECO:0007829|PDB:2K47"
FT   STRAND          263..265
FT                   /evidence="ECO:0007829|PDB:2K47"
SQ   SEQUENCE   265 AA;  29911 MW;  5AC51A1F0273EBDA CRC64;
     MDNLTKVREY LKSYSRLDQA VGEIDEIEAQ RAEKSNYELF QEDGVEEHTK PSYFQAADDS
     DTESEPEIED NQGLYAQDPE AEQVEGFIQG PLDDYADEEV DVVFTSDWKP PELESDEHGK
     TLRLTSPEGL SGEQKSQWLS TIKAVVQSAK YWNLAECTFE ASGEGVIMKE RQITPDVYKV
     TPVMNTHPSQ SEAVSDVWSL SKTSMTFQPK KASLQPLTIS LDELFSSRGE FISVGGDGRM
     SHKEAILLGL RYKKLYNQAR VKYSL
 
 
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