PHT42_ORYSJ
ID PHT42_ORYSJ Reviewed; 535 AA.
AC Q53WP9; A0A0P0WN11;
DT 01-SEP-2009, integrated into UniProtKB/Swiss-Prot.
DT 24-MAY-2005, sequence version 1.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=Probable anion transporter 2, chloroplastic;
DE AltName: Full=Phosphate transporter 4;2;
DE Flags: Precursor;
GN Name=PHT4;2; OrderedLocusNames=Os05g0451100, LOC_Os05g37820;
GN ORFNames=OJ1576_F01.6;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16261349; DOI=10.1007/s00438-005-0039-y;
RA Cheng C.-H., Chung M.C., Liu S.-M., Chen S.-K., Kao F.Y., Lin S.-J.,
RA Hsiao S.-H., Tseng I.C., Hsing Y.-I.C., Wu H.-P., Chen C.-S., Shaw J.-F.,
RA Wu J., Matsumoto T., Sasaki T., Chen H.-C., Chow T.-Y.;
RT "A fine physical map of the rice chromosome 5.";
RL Mol. Genet. Genomics 274:337-345(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [6]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=19513231; DOI=10.4161/psb.3.10.6666;
RA Guo B., Irigoyen S., Fowler T.B., Versaw W.K.;
RT "Differential expression and phylogenetic analysis suggest specialization
RT of plastid-localized members of the PHT4 phosphate transporter family for
RT photosynthetic and heterotrophic tissues.";
RL Plant Signal. Behav. 3:784-790(2008).
CC -!- FUNCTION: Probable anion transporter. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast membrane {ECO:0000305};
CC Multi-pass membrane protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the major facilitator superfamily. Sodium/anion
CC cotransporter (TC 2.A.1.14) family. {ECO:0000305}.
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DR EMBL; AC097176; AAV59349.1; -; Genomic_DNA.
DR EMBL; AP008211; BAF17619.1; -; Genomic_DNA.
DR EMBL; AP014961; BAS94325.1; -; Genomic_DNA.
DR EMBL; AK120548; -; NOT_ANNOTATED_CDS; mRNA.
DR RefSeq; XP_015640020.1; XM_015784534.1.
DR AlphaFoldDB; Q53WP9; -.
DR SMR; Q53WP9; -.
DR STRING; 4530.OS05T0451100-01; -.
DR PaxDb; Q53WP9; -.
DR PRIDE; Q53WP9; -.
DR EnsemblPlants; Os05t0451100-01; Os05t0451100-01; Os05g0451100.
DR GeneID; 4338960; -.
DR Gramene; Os05t0451100-01; Os05t0451100-01; Os05g0451100.
DR KEGG; osa:4338960; -.
DR eggNOG; KOG2532; Eukaryota.
DR HOGENOM; CLU_001265_5_11_1; -.
DR InParanoid; Q53WP9; -.
DR OMA; FYKHPKD; -.
DR OrthoDB; 497052at2759; -.
DR Proteomes; UP000000763; Chromosome 5.
DR Proteomes; UP000059680; Chromosome 5.
DR Genevisible; Q53WP9; OS.
DR GO; GO:0031969; C:chloroplast membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0009536; C:plastid; IBA:GO_Central.
DR GO; GO:0005315; F:inorganic phosphate transmembrane transporter activity; IBA:GO_Central.
DR GO; GO:0006811; P:ion transport; IEA:UniProtKB-KW.
DR CDD; cd17380; MFS_SLC17A9_like; 1.
DR Gene3D; 1.20.1250.20; -; 2.
DR InterPro; IPR011701; MFS.
DR InterPro; IPR020846; MFS_dom.
DR InterPro; IPR036259; MFS_trans_sf.
DR InterPro; IPR044777; SLC17A9-like.
DR Pfam; PF07690; MFS_1; 1.
DR SUPFAM; SSF103473; SSF103473; 1.
DR PROSITE; PS50850; MFS; 1.
PE 2: Evidence at transcript level;
KW Chloroplast; Ion transport; Membrane; Plastid; Reference proteome;
KW Transit peptide; Transmembrane; Transmembrane helix; Transport.
FT TRANSIT 1..95
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT CHAIN 96..535
FT /note="Probable anion transporter 2, chloroplastic"
FT /id="PRO_0000383100"
FT TRANSMEM 125..145
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 160..180
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 191..211
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 215..235
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 254..274
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 279..299
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 343..363
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 381..401
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 413..433
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 443..463
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 483..503
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 504..524
FT /note="Helical"
FT /evidence="ECO:0000255"
FT CONFLICT 11
FT /note="N -> K (in Ref. 5; AK120548)"
FT /evidence="ECO:0000305"
FT CONFLICT 17
FT /note="T -> S (in Ref. 5; AK120548)"
FT /evidence="ECO:0000305"
FT CONFLICT 22
FT /note="K -> R (in Ref. 5; AK120548)"
FT /evidence="ECO:0000305"
FT CONFLICT 32..34
FT /note="DPK -> EPR (in Ref. 5; AK120548)"
FT /evidence="ECO:0000305"
FT CONFLICT 223
FT /note="L -> P (in Ref. 5; AK120548)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 535 AA; 56066 MW; 23CA5763616069FA CRC64;
MASIRSCVSV NPAAAVTPVK YKSARVGAAG LDPKGLRISC SSSSSSLAAG GGDGCRDAGC
ASSSGRGSGV VGSVGDGWWG RRGGQRERAV AAMCSAGMEG VRHGAAAVAS VPAASASALP
ERAKVVALVA AVMLLCNADR VVMSVAVVPF AAQYGWSSSF LGIVQSSFLW GYVFSSMVGG
ALADRYGGKK VMAGAAALWS LATFLTPWAA SQSTIMLLAI RALFGLAEGV AFPTMSTFLP
KWFPTHERAT AVGISMGGFH LGNVISFLAT PIIMSHIGLA GTFAFFASLG YLWLSVWLFN
VESDPLDSRT ISKSELQLIL AGRSASKIQG SKFPSLREIL SKIEMWAIIV ANVVNNWGYF
VLLSWMPVYF KTVYNVNLKQ AAWFSAIPWA VMALSGYVAG ASADFLIKSG FSVALVRKIM
QSIGFIGPGV SLLCLRFAQT PSVAAVLMTI ALSLSSFSQA GYFCNVQDIA PKYAGSLHGL
TNGIGTVAAI VSTIGTGYFV QWLGSFQAFL TLTAVLYFSA TVFYNTYATG DLIFD
