PIGD_SERMA
ID PIGD_SERMA Reviewed; 904 AA.
AC Q5W251;
DT 11-MAY-2016, integrated into UniProtKB/Swiss-Prot.
DT 07-DEC-2004, sequence version 1.
DT 03-AUG-2022, entry version 25.
DE RecName: Full=Thiamine diphosphate dependent-3-acetyloctanal synthase PigD {ECO:0000305};
DE Short=ThDP-dependent enzyme PigD {ECO:0000303|PubMed:20669204};
DE EC=2.2.1.12 {ECO:0000269|PubMed:20669204};
GN Name=pigD {ECO:0000303|PubMed:15528645};
OS Serratia marcescens.
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Yersiniaceae; Serratia.
OX NCBI_TaxID=615;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=ATCC 274 / NCDO 740 / NCIB 1377 / NCTC 1377;
RX PubMed=15528645; DOI=10.1099/mic.0.27222-0;
RA Harris A.K., Williamson N.R., Slater H., Cox A., Abbasi S., Foulds I.,
RA Simonsen H.T., Leeper F.J., Salmond G.P.;
RT "The Serratia gene cluster encoding biosynthesis of the red antibiotic,
RT prodigiosin, shows species- and strain-dependent genome context
RT variation.";
RL Microbiology 150:3547-3560(2004).
RN [2]
RP FUNCTION, CATALYTIC ACTIVITY, COFACTOR, AND SUBSTRATE SPECIFICITY.
RC STRAIN=ATCC 274 / NCDO 740 / NCIB 1377 / NCTC 1377;
RX PubMed=20669204; DOI=10.1002/anie.201000632;
RA Dresen C., Richter M., Pohl M., Luedeke S., Mueller M.;
RT "The enzymatic asymmetric conjugate umpolung reaction.";
RL Angew. Chem. Int. Ed. 49:6600-6603(2010).
CC -!- FUNCTION: Involved in the biosynthesis of 2-methyl-3-n-amyl-pyrrole
CC (MAP), one of the terminal products involved in the biosynthesis of the
CC red antibiotic prodigiosin (Pig). Catalyzes the decarboxylation of
CC pyruvate, followed by the modification of the resulting two-carbon
CC fragment acetaldehyde at the C3 position of the 2-octenal (1,2-addition
CC of acetaldehyde) giving 3-acetyloctanal. In vitro, it can act on a
CC number of alpha,beta-unsaturated carbonyl compounds, including
CC aldehydes and ketones, and can catalyze both 1,2-addition and Stetter-
CC type 1,4-addition depending on the substrate.
CC {ECO:0000269|PubMed:20669204}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(2E)-octenal + H(+) + pyruvate = (S)-3-acetyloctanal + CO2;
CC Xref=Rhea:RHEA:42832, ChEBI:CHEBI:15361, ChEBI:CHEBI:15378,
CC ChEBI:CHEBI:16526, ChEBI:CHEBI:61748, ChEBI:CHEBI:82759; EC=2.2.1.12;
CC Evidence={ECO:0000269|PubMed:20669204};
CC -!- COFACTOR:
CC Name=thiamine diphosphate; Xref=ChEBI:CHEBI:58937;
CC Evidence={ECO:0000269|PubMed:20669204};
CC -!- PATHWAY: Antibiotic biosynthesis; prodigiosin biosynthesis.
CC {ECO:0000250|UniProtKB:Q5W268, ECO:0000305}.
CC -!- SIMILARITY: Belongs to the TPP enzyme family. {ECO:0000305}.
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DR EMBL; AJ833002; CAH55649.1; -; Genomic_DNA.
DR AlphaFoldDB; Q5W251; -.
DR SMR; Q5W251; -.
DR BioCyc; MetaCyc:MON-18822; -.
DR BRENDA; 2.2.1.12; 5690.
DR UniPathway; UPA01072; -.
DR GO; GO:0030976; F:thiamine pyrophosphate binding; IDA:UniProtKB.
DR GO; GO:0016744; F:transketolase or transaldolase activity; IDA:UniProtKB.
DR GO; GO:0017000; P:antibiotic biosynthetic process; ISS:UniProtKB.
DR InterPro; IPR029061; THDP-binding.
DR SUPFAM; SSF52518; SSF52518; 1.
PE 1: Evidence at protein level;
KW Antibiotic biosynthesis; Thiamine pyrophosphate; Transferase.
FT CHAIN 1..904
FT /note="Thiamine diphosphate dependent-3-acetyloctanal
FT synthase PigD"
FT /id="PRO_0000436239"
FT REGION 879..904
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 883..904
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 904 AA; 101200 MW; 50871B3C4A48BF53 CRC64;
MRAATAACRD RRGLCRAEFA RLAEAVTPFW LHKELIMTTL TGQARLTNSA AYEQVWQAER
QACRTDADPD TLTVGVVVVT RNPAFFQTGL SVLNDIRDYV FNRVHIQSEM PLKLLDLAAD
SLYLAAREKA LHFLKGQNKA INVRIIQCAS LAEATGKIIY THALEQRPEF HLGMLFYDQT
TPAGVDDSIE QIDRDLDAFY SALQRSGIPA FYTTFSTVAF IRQLRSPFRY LPQQYREIVR
SEDPAIFQTE LLCLWMDFFE MNYTNRRVKP IGALALHNTL GEQLIQFFER TAAERWLVSY
YTGSIISNLI GYLDRHAEAR GALILRGPNE HAIACGAMAN WQLYRMPFLG VVTSGMMDEF
KGTLANLKET AAQGIIVAAE NRGNQWYSFQ GTLTPTEDMR EVLIARRIPF VYIDDVEMIG
AGLTEAFRLY HQGQGPVVIL ATQNVLESTL SLEGAVCDPS PIPVLSADDP LPMSESLAQA
IALINRGPER LVWQLGPVSD DEYALIHDIA DAAGIALVDS LAHPGSAPKY YQGRRNPHYL
GTLAIYGYSP RVYNFLHTND KLNAMSEQSL FMIKSRVAQI TTPFSDGRLE RKVHLVQLTH
DDRHLSAYAD LHLHMNCLAF LRTVKAHLDV DPALRERRRA LIAAYLDSPS DVVSQLPSLP
MSANYFFCQL NRVIEELIET EGFDFTGVYD VGRCGISAAR NVAKTRRGFS GWYGRALMGD
ALLATGYLAY TSPSHVMAFI GDGAKGIVPD ILPAFIDNIL THPQLLNKSI TVFYLCNGGL
SVINTYQERI LFNRTSRQMR LVNVEQPDVE QTVNNFHIQS KTLTHFDEDV IRQALTTSHR
LNLFSVVLGH NNEGDGISPG HRQRLAALIR ADHDALQERK AWAAQQPEST STAFDQDPTQ
EATS