PIGD_SERS3
ID PIGD_SERS3 Reviewed; 866 AA.
AC Q5W268;
DT 11-MAY-2016, integrated into UniProtKB/Swiss-Prot.
DT 07-DEC-2004, sequence version 1.
DT 25-MAY-2022, entry version 31.
DE RecName: Full=Thiamine diphosphate dependent-3-acetyloctanal synthase PigD {ECO:0000305};
DE Short=ThDP-dependent enzyme PigD {ECO:0000250|UniProtKB:Q5W251};
DE EC=2.2.1.12 {ECO:0000250|UniProtKB:Q5W251};
DE AltName: Full=Terminal condensing enzyme {ECO:0000303|PubMed:15853884};
GN Name=pigD {ECO:0000303|PubMed:15528645};
OS Serratia sp. (strain ATCC 39006).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Yersiniaceae; Serratia; unclassified Serratia.
OX NCBI_TaxID=104623;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=ATCC 39006 / SC 11482;
RX PubMed=15528645; DOI=10.1099/mic.0.27222-0;
RA Harris A.K., Williamson N.R., Slater H., Cox A., Abbasi S., Foulds I.,
RA Simonsen H.T., Leeper F.J., Salmond G.P.;
RT "The Serratia gene cluster encoding biosynthesis of the red antibiotic,
RT prodigiosin, shows species- and strain-dependent genome context
RT variation.";
RL Microbiology 150:3547-3560(2004).
RN [2]
RP FUNCTION, DISRUPTION PHENOTYPE, AND PATHWAY.
RC STRAIN=ATCC 39006 / SC 11482;
RX PubMed=15853884; DOI=10.1111/j.1365-2958.2005.04602.x;
RA Williamson N.R., Simonsen H.T., Ahmed R.A., Goldet G., Slater H.,
RA Woodley L., Leeper F.J., Salmond G.P.;
RT "Biosynthesis of the red antibiotic, prodigiosin, in Serratia:
RT identification of a novel 2-methyl-3-n-amyl-pyrrole (MAP) assembly pathway,
RT definition of the terminal condensing enzyme, and implications for
RT undecylprodigiosin biosynthesis in Streptomyces.";
RL Mol. Microbiol. 56:971-989(2005).
CC -!- FUNCTION: Involved in the biosynthesis of 2-methyl-3-n-amyl-pyrrole
CC (MAP), one of the terminal products involved in the biosynthesis of the
CC red antibiotic prodigiosin (Pig). Catalyzes the decarboxylation of
CC pyruvate, followed by the modification of the resulting two-carbon
CC fragment acetaldehyde at the C3 position of the 2-octenal (1,2-addition
CC of acetaldehyde) giving 3-acetyloctanal. {ECO:0000269|PubMed:15853884}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(2E)-octenal + H(+) + pyruvate = (S)-3-acetyloctanal + CO2;
CC Xref=Rhea:RHEA:42832, ChEBI:CHEBI:15361, ChEBI:CHEBI:15378,
CC ChEBI:CHEBI:16526, ChEBI:CHEBI:61748, ChEBI:CHEBI:82759; EC=2.2.1.12;
CC Evidence={ECO:0000250|UniProtKB:Q5W251};
CC -!- COFACTOR:
CC Name=thiamine diphosphate; Xref=ChEBI:CHEBI:58937;
CC Evidence={ECO:0000250|UniProtKB:Q5W251};
CC -!- PATHWAY: Antibiotic biosynthesis; prodigiosin biosynthesis.
CC {ECO:0000305|PubMed:15853884}.
CC -!- DISRUPTION PHENOTYPE: Cells lacking this gene show a white phenotype
CC and produce 4-hydroxy-2,2'-bipyrrole-5-carbaldehyde (HBC), 4- methoxy-
CC 2,2'-bipyrrole-5-carbaldehyde (MBC) and 4-hydroxy-2,2'-bipyrrole-5-
CC methanol (HBM). {ECO:0000269|PubMed:15853884}.
CC -!- SIMILARITY: Belongs to the TPP enzyme family. {ECO:0000305}.
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DR EMBL; AJ833001; CAH55632.1; -; Genomic_DNA.
DR RefSeq; WP_021014642.1; NZ_CP025085.1.
DR AlphaFoldDB; Q5W268; -.
DR SMR; Q5W268; -.
DR STRING; 104623.Ser39006_01372; -.
DR KEGG; ag:CAH55632; -.
DR eggNOG; COG0028; Bacteria.
DR OrthoDB; 85799at2; -.
DR UniPathway; UPA01072; -.
DR GO; GO:0030976; F:thiamine pyrophosphate binding; ISS:UniProtKB.
DR GO; GO:0016744; F:transketolase or transaldolase activity; ISS:UniProtKB.
DR GO; GO:0017000; P:antibiotic biosynthetic process; IMP:UniProtKB.
PE 3: Inferred from homology;
KW Antibiotic biosynthesis; Thiamine pyrophosphate; Transferase.
FT CHAIN 1..866
FT /note="Thiamine diphosphate dependent-3-acetyloctanal
FT synthase PigD"
FT /id="PRO_0000436240"
FT REGION 826..866
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 829..847
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 848..866
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 866 AA; 96977 MW; 66506324F1C7B04D CRC64;
MTTMIGQTRQ AGSSSYEQAW QAEQAPCPGM EPDTLTVGVV VVTRNPTFFQ TGLSVLNDIR
DYVFNRVHIQ SELPLKLSEL ASDPLYSEAR EKAIHFLKNQ SKALNIQVIQ CASLAEATGK
IIYTHALEQQ PEFQMGMLFY DQTSLGNVDD SIEKIDRDLD AFYSAMQRGG IPAFYTTFST
VTFIRDVRSS FRYLPQQYRE IVRSEDPAIF QTELLCLWMD FFEMNYTNRR VKPIGALALH
NTLAEQLIQF FERTAASRWL VSYYTGSIIS NLIGYLDRHA EAHGALVLRG PNEHAIACGA
MANWQLYRMP FLGVVTSGMM DEFKGTLINL KETAAQGIIV AAENRNNQWY SFQGTQTPTE
DMRDVLAAKR IPYVYIDDVD GIADGLAEVF RLYHQAQGPV VILATQNVLE STLSLEPVPG
DLPPVSGLPA YDCPPISDSF EQAMALINEG PEKLVWQLGP VSDDEYALVH EIADAAGLAL
VDSLAHPGSA PKYYQGKRNP HYLGTLAIYG YSPRVYNFLH TNDKLNPMSD QSVFMIKSRV
AQITTPFSDG RLERKVHLVQ LTHDERHLSP YADLKLHMDC LTFLRAVKAN LHVDAALREK
RKALIAAYLD SPSDVVSQLP SLPMSANYFF CQLNRVIENL IKTENFDFTG VYDVGRCGIS
AVRNVAKTRR GFSGWYGRAL MGDALLATSY LAHTSPTHVV AFIGDGAKGI VPDILPAFID
NILTHPQLLN KSITIFYFCN GGLSVINTYQ ERILFNRTSR QMRLVNVDQP AFEQTVDDFH
IQGKTLTHFD EDTIRHALMT PKRLNLFSVV LGHNNEGDGI SLATAKGWQR DPSDREALQE
RKDWAARQPE STSTSFDQGQ NKEAIS