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PILS_PSEAE
ID   PILS_PSEAE              Reviewed;         530 AA.
AC   P33639;
DT   01-FEB-1994, integrated into UniProtKB/Swiss-Prot.
DT   01-FEB-1994, sequence version 1.
DT   03-AUG-2022, entry version 146.
DE   RecName: Full=Sensor protein kinase PilS {ECO:0000303|PubMed:30042200};
DE            EC=2.7.13.3 {ECO:0000269|PubMed:8550520};
GN   Name=pilS; OrderedLocusNames=PA4546;
OS   Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM
OS   14847 / LMG 12228 / 1C / PRS 101 / PAO1).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=208964;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND FUNCTION.
RC   STRAIN=ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C /
RC   PRS 101 / PAO1;
RX   PubMed=8097014; DOI=10.1111/j.1365-2958.1993.tb01158.x;
RA   Hobbs M., Collie E.S.R., Free P.D., Livingston S.P., Mattick J.S.;
RT   "PilS and PilR, a two-component transcriptional regulatory system
RT   controlling expression of type 4 fimbriae in Pseudomonas aeruginosa.";
RL   Mol. Microbiol. 7:669-682(1993).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C /
RC   PRS 101 / PAO1;
RX   PubMed=10984043; DOI=10.1038/35023079;
RA   Stover C.K., Pham X.-Q.T., Erwin A.L., Mizoguchi S.D., Warrener P.,
RA   Hickey M.J., Brinkman F.S.L., Hufnagle W.O., Kowalik D.J., Lagrou M.,
RA   Garber R.L., Goltry L., Tolentino E., Westbrock-Wadman S., Yuan Y.,
RA   Brody L.L., Coulter S.N., Folger K.R., Kas A., Larbig K., Lim R.M.,
RA   Smith K.A., Spencer D.H., Wong G.K.-S., Wu Z., Paulsen I.T., Reizer J.,
RA   Saier M.H. Jr., Hancock R.E.W., Lory S., Olson M.V.;
RT   "Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic
RT   pathogen.";
RL   Nature 406:959-964(2000).
RN   [3]
RP   FUNCTION.
RC   STRAIN=PAK;
RX   PubMed=7911557; DOI=10.1007/bf00284205;
RA   Boyd J.M., Koga T., Lory S.;
RT   "Identification and characterization of PilS, an essential regulator of
RT   pilin expression in Pseudomonas aeruginosa.";
RL   Mol. Gen. Genet. 243:565-574(1994).
RN   [4]
RP   FUNCTION, SUBCELLULAR LOCATION, MUTAGENESIS OF HIS-319, AND CATALYTIC
RP   ACTIVITY.
RC   STRAIN=PAK;
RX   PubMed=8550520; DOI=10.1128/jb.178.3.831-839.1996;
RA   Boyd J.M., Lory S.;
RT   "Dual function of PilS during transcriptional activation of the Pseudomonas
RT   aeruginosa pilin subunit gene.";
RL   J. Bacteriol. 178:831-839(1996).
RN   [5]
RP   SUBCELLULAR LOCATION, AND DOMAIN.
RC   STRAIN=PAK;
RX   PubMed=10760172; DOI=10.1046/j.1365-2958.2000.01836.x;
RA   Boyd J.M.;
RT   "Localization of the histidine kinase PilS to the poles of Pseudomonas
RT   aeruginosa and identification of a localization domain.";
RL   Mol. Microbiol. 36:153-162(2000).
RN   [6]
RP   FUNCTION, INTERACTION WITH PILA, SUBCELLULAR LOCATION, AND MUTAGENESIS OF
RP   ARG-24 AND ASN-323.
RX   PubMed=27162347; DOI=10.1073/pnas.1512947113;
RA   Kilmury S.L., Burrows L.L.;
RT   "Type IV pilins regulate their own expression via direct intramembrane
RT   interactions with the sensor kinase PilS.";
RL   Proc. Natl. Acad. Sci. U.S.A. 113:6017-6022(2016).
RN   [7]
RP   FUNCTION, AND DISRUPTION PHENOTYPE.
RX   PubMed=30042200; DOI=10.1128/mbio.01310-18;
RA   Kilmury S.L.N., Burrows L.L.;
RT   "The Pseudomonas aeruginosa PilSR Two-Component System Regulates Both
RT   Twitching and Swimming Motilities.";
RL   MBio 9:0-0(2018).
CC   -!- FUNCTION: Member of the two-component regulatory system PilS/PilR that
CC       regulates the expression of multiple genes including the type IV pilus
CC       (T4P) major subunit PilA (PubMed:8097014, PubMed:7911557). Thereby,
CC       plays a major role in the regulation of multiple motility pathways
CC       (PubMed:30042200). Functions as a membrane-associated protein kinase
CC       that phosphorylates PilR in response to environmental signals leading
CC       to activation of specific gene promoters including the pilin gene
CC       (PubMed:8550520, PubMed:27162347). {ECO:0000269|PubMed:27162347,
CC       ECO:0000269|PubMed:30042200, ECO:0000269|PubMed:7911557,
CC       ECO:0000269|PubMed:8097014, ECO:0000269|PubMed:8550520}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + protein L-histidine = ADP + protein N-phospho-L-
CC         histidine.; EC=2.7.13.3; Evidence={ECO:0000269|PubMed:8550520};
CC   -!- SUBUNIT: Interacts with PilA. {ECO:0000269|PubMed:27162347}.
CC   -!- SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000269|PubMed:27162347,
CC       ECO:0000269|PubMed:8550520}; Multi-pass membrane protein {ECO:0000305}.
CC       Note=Localizes at both poles of P.aeruginosa. Accumulates also at the
CC       septum of dividing cells, so when the daughter cells separate, PilS is
CC       already in place at both poles. {ECO:0000269|PubMed:10760172}.
CC   -!- DOMAIN: The linker domain is the critical region for polar
CC       localization. {ECO:0000269|PubMed:10760172}.
CC   -!- DISRUPTION PHENOTYPE: Deletion mutant results in changes in swimming,
CC       swarming and/or twitching motility associated with virulence in
CC       specific hosts. {ECO:0000269|PubMed:30042200}.
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DR   EMBL; Z12154; CAA78138.1; -; Genomic_DNA.
DR   EMBL; AE004091; AAG07934.1; -; Genomic_DNA.
DR   PIR; S33673; S33673.
DR   RefSeq; NP_253236.1; NC_002516.2.
DR   RefSeq; WP_003094692.1; NZ_QZGE01000004.1.
DR   AlphaFoldDB; P33639; -.
DR   SMR; P33639; -.
DR   STRING; 287.DR97_1850; -.
DR   PaxDb; P33639; -.
DR   PRIDE; P33639; -.
DR   EnsemblBacteria; AAG07934; AAG07934; PA4546.
DR   GeneID; 877621; -.
DR   KEGG; pae:PA4546; -.
DR   PATRIC; fig|208964.12.peg.4758; -.
DR   PseudoCAP; PA4546; -.
DR   HOGENOM; CLU_000445_114_39_6; -.
DR   InParanoid; P33639; -.
DR   OMA; ICRELCQ; -.
DR   PhylomeDB; P33639; -.
DR   BioCyc; PAER208964:G1FZ6-4639-MON; -.
DR   BRENDA; 2.7.13.3; 5087.
DR   Proteomes; UP000002438; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0000155; F:phosphorelay sensor kinase activity; IEA:InterPro.
DR   GO; GO:0060491; P:regulation of cell projection assembly; IMP:PseudoCAP.
DR   CDD; cd00082; HisKA; 1.
DR   Gene3D; 3.30.565.10; -; 1.
DR   InterPro; IPR003594; HATPase_C.
DR   InterPro; IPR036890; HATPase_C_sf.
DR   InterPro; IPR005467; His_kinase_dom.
DR   InterPro; IPR003661; HisK_dim/P.
DR   InterPro; IPR036097; HisK_dim/P_sf.
DR   InterPro; IPR000014; PAS.
DR   InterPro; IPR004358; Sig_transdc_His_kin-like_C.
DR   Pfam; PF02518; HATPase_c; 1.
DR   Pfam; PF00512; HisKA; 1.
DR   PRINTS; PR00344; BCTRLSENSOR.
DR   SMART; SM00387; HATPase_c; 1.
DR   SMART; SM00388; HisKA; 1.
DR   SMART; SM00091; PAS; 1.
DR   SUPFAM; SSF47384; SSF47384; 1.
DR   SUPFAM; SSF55874; SSF55874; 1.
DR   PROSITE; PS50109; HIS_KIN; 1.
PE   1: Evidence at protein level;
KW   ATP-binding; Cell inner membrane; Cell membrane; Kinase; Membrane;
KW   Nucleotide-binding; Phosphoprotein; Reference proteome; Transferase;
KW   Transmembrane; Transmembrane helix; Two-component regulatory system.
FT   CHAIN           1..530
FT                   /note="Sensor protein kinase PilS"
FT                   /id="PRO_0000074851"
FT   TRANSMEM        25..37
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        57..70
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        76..98
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        101..119
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        124..144
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        156..174
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        175..530
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000255"
FT   DOMAIN          196..260
FT                   /note="PAS"
FT   DOMAIN          316..527
FT                   /note="Histidine kinase"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00107"
FT   MOD_RES         319
FT                   /note="Phosphohistidine; by autocatalysis"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00107"
FT   MUTAGEN         24
FT                   /note="R->E: Complete loss of PilA autoregulation."
FT                   /evidence="ECO:0000269|PubMed:27162347"
FT   MUTAGEN         319
FT                   /note="H->L: Loss of pilin gene expression."
FT                   /evidence="ECO:0000269|PubMed:8550520"
FT   MUTAGEN         323
FT                   /note="N->A: Approximately threefold increase in basal pilA
FT                   transcription."
FT                   /evidence="ECO:0000269|PubMed:27162347"
SQ   SEQUENCE   530 AA;  58985 MW;  1F6E0300E2E77A4C CRC64;
     MRAERLRLSE EQGQRILRLY HLYRLTIGLV LVLLISSELE DQVLKLVHPE LFHVGSWCYL
     VFNILVALFL PPSRQLLPIF ILALTDVLML CGLFYAGGGV PSGIGSLLVV AVAIANILLR
     GRIGLVIAAA ASLGLLYLTF FLSLSSPDAT NHYVQAGGLG TLCFAAALVI QALVRRQEQT
     ETLAEERAET VANLEELNAL ILQRMRTGIL VVDSRQAILL ANQAALGLLR QDDVQGASLG
     RHSPMLMHCM KQWRLNPSLR PPTLKVVPDG PTVQPSFISL NREDDQHVLI FLEDISQIAQ
     QAQQMKLAGL GRLTAGIAHE IRNPLGAISH AAQLLQESEE LDAPDRRLTQ IIQDQSKRMN
     LVIENVLQLS RRRQAEPQQL DLKEWLQRFV DEYPGRLRND SQLHLQLGAG DIQTRMDPHQ
     LNQVLSNLVQ NGLRYSAQAH GRGQVWLSLA RDPESDLPVL EVIDDGPGVP ADKLNNLFEP
     FFTTESKGTG LGLYLSRELC ESNQARIDYR NREEGGGCFR ITFAHPRKLS
 
 
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