ID   PIRL4_ORYSJ             Reviewed;         576 AA.
AC   Q6Z8P4; Q0J4I7;
DT   16-OCT-2013, integrated into UniProtKB/Swiss-Prot.
DT   05-JUL-2004, sequence version 1.
DT   03-AUG-2022, entry version 96.
DE   RecName: Full=Plant intracellular Ras-group-related LRR protein 4;
DE   AltName: Full=Intracellular Ras-group-related LRR protein 4;
DE            Short=OsIRL4;
GN   Name=IRL4; OrderedLocusNames=Os08g0511700, LOC_Os08g40090;
GN   ORFNames=P0711H09.3;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [4]
RP   GENE FAMILY, MOTIF GVYW, TISSUE SPECIFICITY, AND INDUCTION BY LIGHT.
RX   PubMed=20949308; DOI=10.1007/s11103-010-9704-6;
RA   You C., Dai X., Li X., Wang L., Chen G., Xiao J., Wu C.;
RT   "Molecular characterization, expression pattern, and functional analysis of
RT   the OsIRL gene family encoding intracellular Ras-group-related LRR proteins
RT   in rice.";
RL   Plant Mol. Biol. 74:617-629(2010).
CC   -!- FUNCTION: Leucine-rich repeat protein that likely mediates protein
CC       interactions, possibly in the context of signal transduction.
CC       {ECO:0000250}.
CC   -!- TISSUE SPECIFICITY: Widely expressed. {ECO:0000269|PubMed:20949308}.
CC   -!- INDUCTION: By light. {ECO:0000269|PubMed:20949308}.
CC   -!- SIMILARITY: Belongs to the SHOC2 family. {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=BAF24128.2; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR   EMBL; AP004765; BAD10056.1; -; Genomic_DNA.
DR   EMBL; AP008214; BAF24128.2; ALT_SEQ; Genomic_DNA.
DR   EMBL; AP014964; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   RefSeq; XP_015650936.1; XM_015795450.1.
DR   AlphaFoldDB; Q6Z8P4; -.
DR   SMR; Q6Z8P4; -.
DR   STRING; 4530.OS08T0511700-00; -.
DR   PaxDb; Q6Z8P4; -.
DR   PRIDE; Q6Z8P4; -.
DR   GeneID; 4346010; -.
DR   KEGG; osa:4346010; -.
DR   eggNOG; KOG0619; Eukaryota.
DR   HOGENOM; CLU_038753_0_0_1; -.
DR   InParanoid; Q6Z8P4; -.
DR   OrthoDB; 607914at2759; -.
DR   Proteomes; UP000000763; Chromosome 8.
DR   Proteomes; UP000059680; Chromosome 8.
DR   GO; GO:0009416; P:response to light stimulus; IEP:UniProtKB.
DR   Gene3D; 3.80.10.10; -; 1.
DR   InterPro; IPR001611; Leu-rich_rpt.
DR   InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
DR   InterPro; IPR032675; LRR_dom_sf.
DR   Pfam; PF00560; LRR_1; 1.
DR   Pfam; PF13855; LRR_8; 1.
DR   SMART; SM00369; LRR_TYP; 8.
DR   PROSITE; PS51450; LRR; 10.
PE   2: Evidence at transcript level;
KW   Leucine-rich repeat; Reference proteome; Repeat.
FT   CHAIN           1..576
FT                   /note="Plant intracellular Ras-group-related LRR protein 4"
FT                   /id="PRO_0000423613"
FT   REPEAT          272..295
FT                   /note="LRR 1"
FT   REPEAT          296..318
FT                   /note="LRR 2"
FT   REPEAT          320..341
FT                   /note="LRR 3"
FT   REPEAT          342..364
FT                   /note="LRR 4"
FT   REPEAT          366..387
FT                   /note="LRR 5"
FT   REPEAT          389..410
FT                   /note="LRR 6"
FT   REPEAT          411..433
FT                   /note="LRR 7"
FT   REPEAT          434..456
FT                   /note="LRR 8"
FT   REPEAT          458..481
FT                   /note="LRR 9"
FT   REPEAT          482..503
FT                   /note="LRR 10"
FT   REPEAT          505..527
FT                   /note="LRR 11"
FT   REGION          130..181
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   MOTIF           528..535
FT                   /note="GVYW; degenerate"
FT   COMPBIAS        133..181
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   576 AA;  62343 MW;  6793D840D7A136D8 CRC64;
     MGAVGVEAGV FDTVDGLVGE VMRLHRSLPA RPAVEEVEAA EALAAAADRE ERARADAVAR
     LRRSPAVPDE LLCVAQEMHR ALAGFQCREQ KRDAARLLEL EALHTLFDDL IQRASQCLPS
     TSTRAAPRIA APAAATTTTS TAAAGSSSSS AVGNAERHAS SGTNGFTASR VAGTSTSTGR
     VSMDDSYVRK AKAAMWDGGA AATNSHLPRG PVEANSVAVR ADGNYGDDNE KLSLIKLASM
     IEVSAKKGAR DLNLQGKLMA QIEWLPDSIG KLTGLVTLDI SENRLLALPD AIGKLFSLAK
     LDIHANRISQ LPESIGDLRS LIYLNMRGNQ LSSLPSSIGR LLNLEELDVG SNGLSSLPDS
     IGSLTRLKKL IVETNDLDEL PYTIGHCVSL VELQAGYNHL KALPEAVGKL EPLEILSVRY
     NNLRSLPTTM ASLTKLKEVD VSFNELESIP ENFCFATSLI KLNVGNNFAD LQYLPRSIGN
     LEMLEELDMS NNQIRVLPDS FGNLKHLRVL RAEENPLQVP PRDIALKGAQ AVVQYMSDAS
     KRTTKSEPMK PKKTWVHFCF FSRPNKRKHD RIDNAT