PIRL5_ARATH
ID PIRL5_ARATH Reviewed; 526 AA.
AC Q5G5E0;
DT 16-OCT-2013, integrated into UniProtKB/Swiss-Prot.
DT 01-SEP-2009, sequence version 1.
DT 25-MAY-2022, entry version 81.
DE RecName: Full=Plant intracellular Ras-group-related LRR protein 5;
GN Name=PIRL5; OrderedLocusNames=At2g17440; ORFNames=F5J6.20;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], GENE FAMILY, MOTIF GVYW, AND TISSUE
RP SPECIFICITY.
RX PubMed=15809230; DOI=10.1093/pcp/pci097;
RA Forsthoefel N.R., Cutler K., Port M.D., Yamamoto T., Vernon D.M.;
RT "PIRLs: a novel class of plant intracellular leucine-rich repeat
RT proteins.";
RL Plant Cell Physiol. 46:913-922(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Leucine-rich repeat protein that likely mediates protein
CC interactions, possibly in the context of signal transduction.
CC {ECO:0000250}.
CC -!- TISSUE SPECIFICITY: Widely expressed but preferentially in roots.
CC {ECO:0000269|PubMed:15809230}.
CC -!- SIMILARITY: Belongs to the SHOC2 family. {ECO:0000305}.
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DR EMBL; AY849575; AAW57414.1; -; mRNA.
DR EMBL; CP002685; AEC06625.1; -; Genomic_DNA.
DR EMBL; AK228738; BAF00638.1; -; mRNA.
DR PIR; C84552; C84552.
DR RefSeq; NP_179336.1; NM_127299.4.
DR AlphaFoldDB; Q5G5E0; -.
DR SMR; Q5G5E0; -.
DR BioGRID; 1607; 2.
DR STRING; 3702.AT2G17440.1; -.
DR iPTMnet; Q5G5E0; -.
DR PaxDb; Q5G5E0; -.
DR PRIDE; Q5G5E0; -.
DR ProteomicsDB; 234760; -.
DR EnsemblPlants; AT2G17440.1; AT2G17440.1; AT2G17440.
DR GeneID; 816250; -.
DR Gramene; AT2G17440.1; AT2G17440.1; AT2G17440.
DR KEGG; ath:AT2G17440; -.
DR Araport; AT2G17440; -.
DR TAIR; locus:2827587; AT2G17440.
DR eggNOG; KOG0619; Eukaryota.
DR HOGENOM; CLU_038753_0_0_1; -.
DR InParanoid; Q5G5E0; -.
DR OMA; SENCIMV; -.
DR OrthoDB; 607914at2759; -.
DR PhylomeDB; Q5G5E0; -.
DR PRO; PR:Q5G5E0; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q5G5E0; baseline and differential.
DR Genevisible; Q5G5E0; AT.
DR GO; GO:0005886; C:plasma membrane; HDA:TAIR.
DR Gene3D; 3.80.10.10; -; 3.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF00560; LRR_1; 1.
DR Pfam; PF13855; LRR_8; 3.
DR SMART; SM00369; LRR_TYP; 9.
DR PROSITE; PS51450; LRR; 10.
PE 2: Evidence at transcript level;
KW Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..526
FT /note="Plant intracellular Ras-group-related LRR protein 5"
FT /id="PRO_0000423605"
FT REPEAT 229..252
FT /note="LRR 1"
FT REPEAT 253..275
FT /note="LRR 2"
FT REPEAT 276..297
FT /note="LRR 3"
FT REPEAT 298..321
FT /note="LRR 4"
FT REPEAT 323..344
FT /note="LRR 5"
FT REPEAT 346..367
FT /note="LRR 6"
FT REPEAT 368..390
FT /note="LRR 7"
FT REPEAT 391..414
FT /note="LRR 8"
FT REPEAT 416..437
FT /note="LRR 9"
FT REPEAT 438..463
FT /note="LRR 10"
FT REPEAT 465..484
FT /note="LRR 11"
FT MOTIF 485..492
FT /note="GVYW; degenerate"
SQ SEQUENCE 526 AA; 58742 MW; A9C2F51847502D08 CRC64;
MDSKEMVVEE IMRIHRSLPL RPEIDDVETA TSLIQNVEKE DRNRLEAIDK LVKTSSSEVP
LELFNVFKEM KKSLVRFQST EQTREATKIL DLESVHVVFD ELIQRASFCI ASPNSTTALP
RSVPVPAPVV SSDEIPFKSK EIISRDDTFV KKAKSSFYSD GLLAPSKPQV LDSTLHQAKN
VAGNDGEKLS LIKLASLIEV SAKKATQELN LQHRLMDQLE WLPDSLGKLS SLVRLDLSEN
CIMVLPATIG GLISLTRLDL HSNRIGQLPE SIGDLLNLVN LNLSGNQLSS LPSSFNRLIH
LEELDLSSNS LSILPESIGS LVSLKKLDVE TNNIEEIPHS ISGCSSMEEL RADYNRLKAL
PEAVGKLSTL EILTVRYNNI RQLPTTMSSM ANLKELDVSF NELESVPESL CYAKTLVKLN
IGNNFANLRS LPGLIGNLEK LEELDMSNNQ IRFLPYSFKT LSNLRVLQTE QNPLEELPRD
ITEKGAQAVV QYMNDLVEAR NTKSQRTKPK KSWVNSICFF CKSSTN
