PIRL6_ARATH
ID PIRL6_ARATH Reviewed; 380 AA.
AC O64566;
DT 16-OCT-2013, integrated into UniProtKB/Swiss-Prot.
DT 01-AUG-1998, sequence version 1.
DT 03-AUG-2022, entry version 137.
DE RecName: Full=Plant intracellular Ras-group-related LRR protein 6;
GN Name=PIRL6; OrderedLocusNames=At2g19330; ORFNames=F27F23.13;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], GENE FAMILY, MOTIF GVYW, AND TISSUE
RP SPECIFICITY.
RX PubMed=15809230; DOI=10.1093/pcp/pci097;
RA Forsthoefel N.R., Cutler K., Port M.D., Yamamoto T., Vernon D.M.;
RT "PIRLs: a novel class of plant intracellular leucine-rich repeat
RT proteins.";
RL Plant Cell Physiol. 46:913-922(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- FUNCTION: Leucine-rich repeat protein that likely mediates protein
CC interactions, possibly in the context of signal transduction.
CC {ECO:0000250}.
CC -!- TISSUE SPECIFICITY: Widely expressed. {ECO:0000269|PubMed:15809230}.
CC -!- SIMILARITY: Belongs to the SHOC2 family. {ECO:0000305}.
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DR EMBL; AY849576; AAW57415.1; -; mRNA.
DR EMBL; AC003058; AAC16463.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC06869.1; -; Genomic_DNA.
DR PIR; T01281; T01281.
DR RefSeq; NP_179523.1; NM_127490.2.
DR AlphaFoldDB; O64566; -.
DR SMR; O64566; -.
DR STRING; 3702.AT2G19330.1; -.
DR iPTMnet; O64566; -.
DR PaxDb; O64566; -.
DR PRIDE; O64566; -.
DR ProteomicsDB; 235024; -.
DR EnsemblPlants; AT2G19330.1; AT2G19330.1; AT2G19330.
DR GeneID; 816450; -.
DR Gramene; AT2G19330.1; AT2G19330.1; AT2G19330.
DR KEGG; ath:AT2G19330; -.
DR Araport; AT2G19330; -.
DR TAIR; locus:2047595; AT2G19330.
DR eggNOG; KOG0619; Eukaryota.
DR HOGENOM; CLU_000288_18_0_1; -.
DR InParanoid; O64566; -.
DR OMA; FVQIPLC; -.
DR OrthoDB; 1382533at2759; -.
DR PhylomeDB; O64566; -.
DR PRO; PR:O64566; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; O64566; baseline and differential.
DR Genevisible; O64566; AT.
DR Gene3D; 3.80.10.10; -; 2.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF13855; LRR_8; 2.
DR SMART; SM00369; LRR_TYP; 7.
DR PROSITE; PS51450; LRR; 10.
PE 2: Evidence at transcript level;
KW Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..380
FT /note="Plant intracellular Ras-group-related LRR protein 6"
FT /id="PRO_0000423606"
FT REPEAT 59..82
FT /note="LRR 1"
FT REPEAT 83..105
FT /note="LRR 2"
FT REPEAT 107..129
FT /note="LRR 3"
FT REPEAT 130..152
FT /note="LRR 4"
FT REPEAT 154..176
FT /note="LRR 5"
FT REPEAT 177..199
FT /note="LRR 6"
FT REPEAT 201..222
FT /note="LRR 7"
FT REPEAT 223..247
FT /note="LRR 8"
FT REPEAT 248..271
FT /note="LRR 9"
FT REPEAT 273..293
FT /note="LRR 10"
FT REGION 1..57
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 298..301
FT /note="GVYW; degenerate"
SQ SEQUENCE 380 AA; 42811 MW; 1385E44B3CC194B7 CRC64;
MICEEAYHQQ PQIQKEQMMT MDQRNNHQRK RSPLSSPSSP SSPSSPSSPK SPSFNNNEEE
RLEVVNLSGM ALESLPNPSL NLAQICKLDL SNNHLQTIPE SLTARLLNLI ALDVHSNQIK
ALPNSIGCLS KLKTLNVSGN FLVSFPKSIQ HCRSLEELNA NFNKLIRLPD SIGFELTNLR
KLSINSNKLI SLPISITHLT SLRVLDARLN CLMILPDDLE NLINLEILNV SQNFQYLSAL
PSSIGLLMNL IELDVSYNKI TVLPESIGCM RRLRKLSVEG NPLVSPPIEV MEQNLQVVRE
YLTQKMNGGS PRSPSKKKSW GFGKLVKYGT FNGGSRSWNR EEREGFIMPE YRSIDSLASP
RYSGMFSPRR LFSPRTYFSR