PIRL7_ARATH
ID PIRL7_ARATH Reviewed; 373 AA.
AC Q5G5D8; Q9SZQ9;
DT 16-OCT-2013, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2005, sequence version 1.
DT 03-AUG-2022, entry version 110.
DE RecName: Full=Plant intracellular Ras-group-related LRR protein 7;
GN Name=PIRL7; OrderedLocusNames=At4g29880; ORFNames=F27B13.120;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], GENE FAMILY, MOTIF GVYW, AND TISSUE
RP SPECIFICITY.
RX PubMed=15809230; DOI=10.1093/pcp/pci097;
RA Forsthoefel N.R., Cutler K., Port M.D., Yamamoto T., Vernon D.M.;
RT "PIRLs: a novel class of plant intracellular leucine-rich repeat
RT proteins.";
RL Plant Cell Physiol. 46:913-922(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617198; DOI=10.1038/47134;
RA Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA Martienssen R., McCombie W.R.;
RT "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL Nature 402:769-777(1999).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- FUNCTION: Leucine-rich repeat protein that likely mediates protein
CC interactions, possibly in the context of signal transduction.
CC {ECO:0000250}.
CC -!- TISSUE SPECIFICITY: Specifically expressed in flowers.
CC {ECO:0000269|PubMed:15809230}.
CC -!- SIMILARITY: Belongs to the SHOC2 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAB43663.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=CAB79746.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AY849577; AAW57416.1; -; mRNA.
DR EMBL; AL050352; CAB43663.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AL161575; CAB79746.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002687; AEE85688.1; -; Genomic_DNA.
DR PIR; T08549; T08549.
DR RefSeq; NP_194717.2; NM_119134.3.
DR AlphaFoldDB; Q5G5D8; -.
DR SMR; Q5G5D8; -.
DR STRING; 3702.AT4G29880.1; -.
DR PaxDb; Q5G5D8; -.
DR PRIDE; Q5G5D8; -.
DR ProteomicsDB; 235088; -.
DR EnsemblPlants; AT4G29880.1; AT4G29880.1; AT4G29880.
DR GeneID; 829110; -.
DR Gramene; AT4G29880.1; AT4G29880.1; AT4G29880.
DR KEGG; ath:AT4G29880; -.
DR Araport; AT4G29880; -.
DR TAIR; locus:2123899; AT4G29880.
DR eggNOG; KOG0619; Eukaryota.
DR HOGENOM; CLU_000288_18_0_1; -.
DR InParanoid; Q5G5D8; -.
DR OMA; GLIMPEY; -.
DR OrthoDB; 1382533at2759; -.
DR PhylomeDB; Q5G5D8; -.
DR PRO; PR:Q5G5D8; -.
DR Proteomes; UP000006548; Chromosome 4.
DR ExpressionAtlas; Q5G5D8; baseline and differential.
DR Gene3D; 3.80.10.10; -; 2.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF13855; LRR_8; 2.
DR SMART; SM00369; LRR_TYP; 7.
DR PROSITE; PS51450; LRR; 9.
PE 2: Evidence at transcript level;
KW Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..373
FT /note="Plant intracellular Ras-group-related LRR protein 7"
FT /id="PRO_0000423607"
FT REPEAT 52..75
FT /note="LRR 1"
FT REPEAT 76..98
FT /note="LRR 2"
FT REPEAT 100..122
FT /note="LRR 3"
FT REPEAT 123..145
FT /note="LRR 4"
FT REPEAT 147..169
FT /note="LRR 5"
FT REPEAT 170..192
FT /note="LRR 6"
FT REPEAT 194..215
FT /note="LRR 7"
FT REPEAT 216..240
FT /note="LRR 8"
FT REPEAT 241..264
FT /note="LRR 9"
FT REPEAT 266..286
FT /note="LRR 10"
FT REGION 25..49
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 291..294
FT /note="GVYW; degenerate"
FT COMPBIAS 26..49
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 373 AA; 41990 MW; D6DCD7FDAC86EAAE CRC64;
MICEDAYQYQ QLHGQKDHMM TMMMMDLSTS PPSSPLSPSL SPKSPSYNNN EEERLEVVNL
SGMALQSLPN PSLNLANICK LDLSNNHIKK IPESLTARLL NLIALDIHSN QIKALPNSIG
CLSKLKILNV SGNFLVSLPQ TIQNCRSLEE LNANFNELIR LPDNIGLELT NLKKLCVNSN
KLISLPATIT CLTSLRVLDA RLNCLMILPE DLENLINLEI LNVSQNFQYL SALPSSIGLL
LNLLELDISY NKITVLPESI GCMRRLRKLS AEGNPLVSPP IEVVEQSLHA VREYLSQKMN
GKLVNTAAKK KTWGFRKLVK YGTFNGRSRV WTREEREGLI MPEYRPIDIL TSTKFPVTCS
PRRLFSPRTY FSR
