PKRI1_XENLA
ID PKRI1_XENLA Reviewed; 173 AA.
AC Q6GNG8;
DT 18-MAR-2008, integrated into UniProtKB/Swiss-Prot.
DT 19-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 50.
DE RecName: Full=PRKR-interacting protein 1 homolog;
GN Name=prkrip1;
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Spleen;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Required for pre-mRNA splicing as component of the
CC spliceosome (By similarity). Binds double-stranded RNA (By similarity).
CC {ECO:0000250|UniProtKB:Q9CWV6, ECO:0000250|UniProtKB:Q9H875}.
CC -!- SUBUNIT: Component of the pre-catalytic and post-catalytic spliceosome
CC complexes. {ECO:0000250|UniProtKB:Q9H875}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:Q9H875}. Nucleus,
CC nucleolus {ECO:0000250|UniProtKB:Q9CWV6}.
CC -!- SIMILARITY: Belongs to the PRKRIP1 family. {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; BC073544; AAH73544.1; -; mRNA.
DR RefSeq; NP_001085923.1; NM_001092454.1.
DR RefSeq; XP_018100559.1; XM_018245070.1.
DR AlphaFoldDB; Q6GNG8; -.
DR SMR; Q6GNG8; -.
DR MaxQB; Q6GNG8; -.
DR GeneID; 444352; -.
DR KEGG; xla:444352; -.
DR CTD; 444352; -.
DR Xenbase; XB-GENE-986511; prkrip1.L.
DR OMA; EPSFIMG; -.
DR OrthoDB; 1545283at2759; -.
DR Proteomes; UP000186698; Chromosome 2L.
DR Bgee; 444352; Expressed in gastrula and 19 other tissues.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0003725; F:double-stranded RNA binding; IEA:InterPro.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR InterPro; IPR009548; Prkrip1.
DR PANTHER; PTHR13507; PTHR13507; 1.
DR Pfam; PF06658; DUF1168; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; mRNA processing; mRNA splicing; Nucleus; Reference proteome;
KW Spliceosome.
FT CHAIN 1..173
FT /note="PRKR-interacting protein 1 homolog"
FT /id="PRO_0000324792"
FT REGION 1..59
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 50..142
FT /note="Required for RNA-binding"
FT /evidence="ECO:0000250"
FT REGION 117..173
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 125..137
FT /note="Required for nuclear localization"
FT /evidence="ECO:0000250"
FT COILED 99..150
FT /evidence="ECO:0000255"
FT COMPBIAS 28..59
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 127..143
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 144..173
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 173 AA; 20319 MW; 04762F54AD9A81C9 CRC64;
MAKETGTAKP ARQKKEPQPL VIPKNATDEQ RLKLERLMRN PDKPATVPER PKEWSPRSAP
EFVRDVMGSS AGAGSGEFHV YRHLRRREYQ RQEFLDGMSE KQRLDEEYKK KLIQNKMLEE
ERTAKRRLKR QKLKEKKKMC KKGKKEEKKE DKDGHTDPEN SAESSDKSDL EDQ