PKS17_DICDI
ID PKS17_DICDI Reviewed; 2604 AA.
AC Q869X2; Q554C1;
DT 05-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 03-AUG-2022, entry version 118.
DE RecName: Full=Probable polyketide synthase 17;
DE Short=dipks17;
DE EC=2.3.1.-;
GN Name=pks17; ORFNames=DDB_G0275077;
OS Dictyostelium discoideum (Slime mold).
OC Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales;
OC Dictyosteliaceae; Dictyostelium.
OX NCBI_TaxID=44689;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AX4;
RX PubMed=12097910; DOI=10.1038/nature00847;
RA Gloeckner G., Eichinger L., Szafranski K., Pachebat J.A., Bankier A.T.,
RA Dear P.H., Lehmann R., Baumgart C., Parra G., Abril J.F., Guigo R.,
RA Kumpf K., Tunggal B., Cox E.C., Quail M.A., Platzer M., Rosenthal A.,
RA Noegel A.A.;
RT "Sequence and analysis of chromosome 2 of Dictyostelium discoideum.";
RL Nature 418:79-85(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AX4;
RX PubMed=15875012; DOI=10.1038/nature03481;
RA Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R.,
RA Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B.,
RA Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T.,
RA Lehmann R., Hamlin N., Davies R., Gaudet P., Fey P., Pilcher K., Chen G.,
RA Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N.,
RA Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E.,
RA Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N.,
RA Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D.,
RA Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T.,
RA Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D.,
RA Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A.,
RA Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M.,
RA Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A.,
RA Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y.,
RA Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C.,
RA Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R.,
RA Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.;
RT "The genome of the social amoeba Dictyostelium discoideum.";
RL Nature 435:43-57(2005).
RN [3]
RP IDENTIFICATION.
RX PubMed=17660200; DOI=10.1093/bioinformatics/btm381;
RA Zucko J., Skunca N., Curk T., Zupan B., Long P.F., Cullum J., Kessin R.H.,
RA Hranueli D.;
RT "Polyketide synthase genes and the natural products potential of
RT Dictyostelium discoideum.";
RL Bioinformatics 23:2543-2549(2007).
CC -!- FUNCTION: Probable polyketide synthase. {ECO:0000250}.
CC -!- COFACTOR:
CC Name=pantetheine 4'-phosphate; Xref=ChEBI:CHEBI:47942;
CC Evidence={ECO:0000250};
CC Note=Binds 1 phosphopantetheine covalently. {ECO:0000250};
CC -!- DOMAIN: Modular protein that is responsible for the completion of one
CC condensation-processing cycle. The beta-ketoacyl synthase region is
CC responsible for the actual condensation reaction while the acyl/malonyl
CC transferase region is responsible for incorporating carboxylic acids
CC units onto an acyl carrier protein (ACP) domain (By similarity).
CC {ECO:0000250}.
CC -!- MISCELLANEOUS: Encoded by one of the numerous copies of polyketide
CC synthase genes and clustered as a pair pks16/pks17 in chromosome 2.
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DR EMBL; AAFI02000013; EAL69819.1; -; Genomic_DNA.
DR RefSeq; XP_643790.1; XM_638698.1.
DR AlphaFoldDB; Q869X2; -.
DR SMR; Q869X2; -.
DR PaxDb; Q869X2; -.
DR PRIDE; Q869X2; -.
DR EnsemblProtists; EAL69819; EAL69819; DDB_G0275077.
DR GeneID; 8619835; -.
DR KEGG; ddi:DDB_G0275077; -.
DR dictyBase; DDB_G0275077; pks17.
DR eggNOG; KOG1202; Eukaryota.
DR HOGENOM; CLU_000022_31_0_1; -.
DR InParanoid; Q869X2; -.
DR PhylomeDB; Q869X2; -.
DR Reactome; R-DDI-163765; ChREBP activates metabolic gene expression.
DR Reactome; R-DDI-199220; Vitamin B5 (pantothenate) metabolism.
DR Reactome; R-DDI-75105; Fatty acyl-CoA biosynthesis.
DR PRO; PR:Q869X2; -.
DR Proteomes; UP000002195; Chromosome 2.
DR GO; GO:0004315; F:3-oxoacyl-[acyl-carrier-protein] synthase activity; IEA:InterPro.
DR GO; GO:0004312; F:fatty acid synthase activity; IBA:GO_Central.
DR GO; GO:0016491; F:oxidoreductase activity; IEA:InterPro.
DR GO; GO:0006633; P:fatty acid biosynthetic process; IMP:dictyBase.
DR GO; GO:0030587; P:sorocarp development; IMP:dictyBase.
DR Gene3D; 1.10.1200.10; -; 1.
DR Gene3D; 3.10.129.110; -; 1.
DR Gene3D; 3.40.366.10; -; 1.
DR Gene3D; 3.40.47.10; -; 1.
DR Gene3D; 3.40.50.150; -; 1.
DR InterPro; IPR001227; Ac_transferase_dom_sf.
DR InterPro; IPR036736; ACP-like_sf.
DR InterPro; IPR014043; Acyl_transferase.
DR InterPro; IPR016035; Acyl_Trfase/lysoPLipase.
DR InterPro; IPR011032; GroES-like_sf.
DR InterPro; IPR018201; Ketoacyl_synth_AS.
DR InterPro; IPR014031; Ketoacyl_synth_C.
DR InterPro; IPR014030; Ketoacyl_synth_N.
DR InterPro; IPR016036; Malonyl_transacylase_ACP-bd.
DR InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR InterPro; IPR032821; PKS_assoc.
DR InterPro; IPR020841; PKS_Beta-ketoAc_synthase_dom.
DR InterPro; IPR020807; PKS_dehydratase.
DR InterPro; IPR042104; PKS_dehydratase_sf.
DR InterPro; IPR020843; PKS_ER.
DR InterPro; IPR013968; PKS_KR.
DR InterPro; IPR009081; PP-bd_ACP.
DR InterPro; IPR029063; SAM-dependent_MTases_sf.
DR InterPro; IPR016039; Thiolase-like.
DR Pfam; PF00698; Acyl_transf_1; 1.
DR Pfam; PF16197; KAsynt_C_assoc; 1.
DR Pfam; PF00109; ketoacyl-synt; 1.
DR Pfam; PF02801; Ketoacyl-synt_C; 1.
DR Pfam; PF08659; KR; 1.
DR Pfam; PF00550; PP-binding; 1.
DR Pfam; PF14765; PS-DH; 1.
DR SMART; SM00827; PKS_AT; 1.
DR SMART; SM00829; PKS_ER; 1.
DR SMART; SM00825; PKS_KS; 1.
DR SUPFAM; SSF47336; SSF47336; 1.
DR SUPFAM; SSF50129; SSF50129; 1.
DR SUPFAM; SSF51735; SSF51735; 2.
DR SUPFAM; SSF52151; SSF52151; 1.
DR SUPFAM; SSF53335; SSF53335; 1.
DR SUPFAM; SSF53901; SSF53901; 1.
DR SUPFAM; SSF55048; SSF55048; 1.
DR PROSITE; PS00606; B_KETOACYL_SYNTHASE; 1.
DR PROSITE; PS50075; CARRIER; 1.
PE 3: Inferred from homology;
KW Phosphopantetheine; Phosphoprotein; Reference proteome; Transferase.
FT CHAIN 1..2604
FT /note="Probable polyketide synthase 17"
FT /id="PRO_0000371382"
FT DOMAIN 2507..2584
FT /note="Carrier"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
FT REGION 160..213
FT /note="Beta-ketoacyl synthase"
FT REGION 631..664
FT /note="Acyl/malonyl transferases"
FT REGION 1357..1407
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 2581..2604
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1359..1388
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT ACT_SITE 179
FT /note="For beta-ketoacyl synthase activity"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10022"
FT ACT_SITE 641
FT /note="For acyl/malonyl transferase activity"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10022"
FT MOD_RES 2544
FT /note="O-(pantetheine 4'-phosphoryl)serine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
SQ SEQUENCE 2604 AA; 291203 MW; 9471188B421EAC24 CRC64;
MTFNNIKDEN NDDIAIIGMG FRFPGGGNNP YQFWNQLSNK MDGISKIPTE KWSRSFYEQK
YINNEYGGVL KDEEWKNFDP LFFGISPKEA PIIDPQQRLL MTTLWEAFED ANIKPSTFRG
SDTAVFIGMM NTDYQRCQFR DISYVNPYIT PGTAGSFISN RLSFSFDLRG PSMTLDTACS
SSLNAVYLGC QAIANGDSKM AIVGGVNGIF DPCFSMTFSG LNMLGHKGQC RSFDAGADGY
IRSEGGGVCI LKKYSDAIKD GDRIYCVIKG GSSNVDGYNA KTNIIQPSMK AQGENIEIAL
KKSGVNPSDI YYIEAHGTGT PVGDPIEIEA ISRIFKDNHT PDAPLYIGSV KSNIGHLESA
AGIASLIKVA LSLKNRSLVP NIHFEKPNPL IKFEDWNIRV VTDEIQFPIN KLINMGINCF
GLSGSNCHMI LSEAPINYDE LLKTTNNNST SSSSNDDKKE YLIPFSANCN ISLDKYIEKL
ISNQSIYKDT ILFKDFVKHQ TISKSNLIKR KVITASDWDD FLNKRNETTS TSSLTSTISA
PASSTPVIYV FTGQGPQWRD MGKALYETES VFKDAIDHCD KLLANYFGYS ILQKLLSLES
EDSPEIHHPI LAQPSIFLIQ VGLVALYKSF GISPSIVVGH SFGEIPSALF SDVISLETAV
KIVYYRGLAQ NLTMGTGRLL SIGIGADAYL EKCALLYPEI EIACYNDPNS IVITGSEQDL
LGAKSTLSAE GVFCAFLGTP CSFHSSKQEM IKEKIFKDLS DLPESNVPCV PFFSTITGSQ
LSHKGFYNVQ YIYDNLRMPV EFTKAISNIF NFIEENESYK NAIFLEIGPH PTLGFYIPKC
KPSNSTITSK PIIVSPLHKK KEELTQFKLA ISTLYCNGVE IDFASGQQLL PTSSSSGGGD
ISSFKESTNK LPRYQWDFEE YWDEPNQSKM VKRGPSNNLL GHDQFAGNTL MELFIDIDKS
AHQYLKGHKI KGKYLFPGSG YIDNILRQFN GQDITIFNLE FSNPFFLKDG VQHHLQTSIT
PTTKGEFKVE FFIKDNRNST KWTKTSNGRI GLFKHNPKNN KLDIEKLKSQ CSFTTLTKSE
VYNKLLLLSL PYGPTFQRVE SCSIGDGCSF FKLSMSPCSE FDKDFLNPSI IDCAFHGLLV
LSEGPQEIVF DRLQDMKFYS SNVPSTRPQF IYAFAKFDKI EGNSTHGSLN IILEDGTLLI
SIKNVKCTSL IRLKKQSIKY PSQNVYSHHW QSKDSPLTLI ENQLIEEKSS ESKINFEKLL
NDKLFNYYLI RLLNQSIKSE FIEFDYKTST VDTLDIGSKN AKLLEKIQSI LNPIDSLDQS
IDITSLKQAI IVKSSFKNEI KLVEKSIKRI VSLLKGGESE HFSPSNPSSP NDTPRNNSNN
CSSKNNAASS DDADDDTNNE ETINQLNNEP FNFSNSQFIS NQNQLISKTI VNSFDRLINS
IEIGEKKLIK IIDLSSIYQN YQLSKLLLLQ LNQLLINLSN NNNIEIEYTI PSNTKNIDSI
TEETKSISNV LNIKYRSFDL QDDLESNGYL NSNYDLIITS LLLVSTNSID SNEVLSKLYK
LLLPKGQLIL MEPPKGVLSF NLLFANDFKQ SLEIKSEQEI KSLIIYCGFT KIETNLNTKD
DEEQQQPPPP SILIVQAEKR DIESMSLTFS SDPKSLNSSY SNCIFIVSKE QKENPTSYIQ
EYFDITEFFC QNATIIEADD SELLTKTIES GVGKNDIIFF LVSLEELTIE NYKQVTMQYT
LVNQILLRNN LSTRFALLTY DSQNGGKNYL GSSLIGTFRY FLEFRSLNIF SIDVDKDSID
NLTLFLRLVD LSTIGDRETI VRNNKIFVQK IFKEPKLLSP SNNYEKNTNN LFLYSNSNLD
FSFQSKEKLL HGCVEIKVMS TGINYKDSLF YRGLLPQEVF SKGDIYSPPF GLECAGYITR
VAPSGVTRFK VGDQVVGFAS HSLSSHVTTH QNKIVLKPEN ISFNEAAAVC VVYATSYYSI
FHIGAFIADK ESILVHSATG GVGLASLNLL KWKRNQLKKH GNSEISNDAS IYATVGSKEK
IDYLQEKYGD LITAIYNSRD TEYCDEIKQQ SAQGGVDLIL NTLSGDYLSS NFRSLSQVGR
IMDLSVTQLV ENDSLDFSNF KYHVGYNTID LDRATKYNSK IIRDILTEVF DAISDGSLEN
IPVKVFPAIQ VKTAIEYINE RVHIGKIVVD FENFEQDILK PALQEKENPI QLNKVKKLEH
TCDTLNNTIL ITGQTGIAVH ILKWIISGSV LNSNKSQQQV TDFIILSRSS LKWELENLIN
QTKHKYGDRF RFHYKSVNIA DLNSTRTAID QVYSSCKNVS PIKSVLHFAT VYEYILPENI
TQTVIDNTHN PKAVGAINLH NLSIEKDWKL ENFILFSSIG AIIGGSKQCA YSSANLVLDS
LSNYRKSIGL ASTSINWGGL DAGGVAATDK SVASFLEGQG ILLVSLSKIL GCLDSVFQPS
NSHLSNFMLS SFNIDNLLSS APQMKRKMDH HLTNYKTSSA SSDDSLGDSG STQAKVISTI
SELLSIHPSK LNLDTRLKDY GIDSLLTVQL KNWIDKEFTK NLFTHLQLSS SSINSIIQRI
SSKSTSTSTP NPTNTSKQTA TKKT