PKS19_DICDI
ID PKS19_DICDI Reviewed; 2778 AA.
AC Q54T36;
DT 24-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT 24-MAY-2005, sequence version 1.
DT 23-FEB-2022, entry version 109.
DE RecName: Full=Probable polyketide synthase 19;
DE Short=dipks19;
DE EC=2.3.1.-;
GN Name=pks19; ORFNames=DDB_G0282027;
OS Dictyostelium discoideum (Slime mold).
OC Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales;
OC Dictyosteliaceae; Dictyostelium.
OX NCBI_TaxID=44689;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AX4;
RX PubMed=15875012; DOI=10.1038/nature03481;
RA Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R.,
RA Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B.,
RA Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T.,
RA Lehmann R., Hamlin N., Davies R., Gaudet P., Fey P., Pilcher K., Chen G.,
RA Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N.,
RA Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E.,
RA Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N.,
RA Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D.,
RA Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T.,
RA Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D.,
RA Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A.,
RA Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M.,
RA Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A.,
RA Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y.,
RA Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C.,
RA Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R.,
RA Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.;
RT "The genome of the social amoeba Dictyostelium discoideum.";
RL Nature 435:43-57(2005).
RN [2]
RP IDENTIFICATION.
RX PubMed=17660200; DOI=10.1093/bioinformatics/btm381;
RA Zucko J., Skunca N., Curk T., Zupan B., Long P.F., Cullum J., Kessin R.H.,
RA Hranueli D.;
RT "Polyketide synthase genes and the natural products potential of
RT Dictyostelium discoideum.";
RL Bioinformatics 23:2543-2549(2007).
CC -!- FUNCTION: Probable polyketide synthase. {ECO:0000250}.
CC -!- COFACTOR:
CC Name=pantetheine 4'-phosphate; Xref=ChEBI:CHEBI:47942;
CC Evidence={ECO:0000250};
CC Note=Binds 1 phosphopantetheine covalently. {ECO:0000250};
CC -!- DOMAIN: Modular protein that is responsible for the completion of one
CC condensation-processing cycle. The beta-ketoacyl synthase region is
CC responsible for the actual condensation reaction while the acyl/malonyl
CC transferase region is responsible for incorporating carboxylic acids
CC units onto an acyl carrier protein (ACP) domain (By similarity).
CC {ECO:0000250}.
CC -!- MISCELLANEOUS: Encoded by one of the numerous copies of polyketide
CC synthase genes and clustered as a triplet pks19/pks20/pks21 in
CC chromosome 3.
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DR EMBL; AAFI02000044; EAL66435.1; -; Genomic_DNA.
DR RefSeq; XP_640415.1; XM_635323.1.
DR SMR; Q54T36; -.
DR STRING; 44689.DDB0235205; -.
DR PaxDb; Q54T36; -.
DR PRIDE; Q54T36; -.
DR EnsemblProtists; EAL66435; EAL66435; DDB_G0282027.
DR GeneID; 8623370; -.
DR KEGG; ddi:DDB_G0282027; -.
DR dictyBase; DDB_G0282027; pks19.
DR eggNOG; KOG1178; Eukaryota.
DR eggNOG; KOG1202; Eukaryota.
DR HOGENOM; CLU_000022_31_0_1; -.
DR InParanoid; Q54T36; -.
DR PhylomeDB; Q54T36; -.
DR PRO; PR:Q54T36; -.
DR Proteomes; UP000002195; Chromosome 3.
DR GO; GO:0004315; F:3-oxoacyl-[acyl-carrier-protein] synthase activity; IEA:InterPro.
DR GO; GO:0016491; F:oxidoreductase activity; IEA:InterPro.
DR GO; GO:0006633; P:fatty acid biosynthetic process; IEA:InterPro.
DR CDD; cd05235; SDR_e1; 1.
DR Gene3D; 3.10.129.110; -; 1.
DR Gene3D; 3.40.366.10; -; 1.
DR Gene3D; 3.40.47.10; -; 1.
DR InterPro; IPR001227; Ac_transferase_dom_sf.
DR InterPro; IPR036736; ACP-like_sf.
DR InterPro; IPR014043; Acyl_transferase.
DR InterPro; IPR016035; Acyl_Trfase/lysoPLipase.
DR InterPro; IPR013120; Far_NAD-bd.
DR InterPro; IPR011032; GroES-like_sf.
DR InterPro; IPR018201; Ketoacyl_synth_AS.
DR InterPro; IPR014031; Ketoacyl_synth_C.
DR InterPro; IPR014030; Ketoacyl_synth_N.
DR InterPro; IPR016036; Malonyl_transacylase_ACP-bd.
DR InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR InterPro; IPR032821; PKS_assoc.
DR InterPro; IPR020841; PKS_Beta-ketoAc_synthase_dom.
DR InterPro; IPR020807; PKS_dehydratase.
DR InterPro; IPR042104; PKS_dehydratase_sf.
DR InterPro; IPR020843; PKS_ER.
DR InterPro; IPR013968; PKS_KR.
DR InterPro; IPR009081; PP-bd_ACP.
DR InterPro; IPR010080; Thioester_reductase-like_dom.
DR InterPro; IPR016039; Thiolase-like.
DR Pfam; PF00698; Acyl_transf_1; 1.
DR Pfam; PF16197; KAsynt_C_assoc; 1.
DR Pfam; PF00109; ketoacyl-synt; 1.
DR Pfam; PF02801; Ketoacyl-synt_C; 1.
DR Pfam; PF08659; KR; 1.
DR Pfam; PF07993; NAD_binding_4; 1.
DR Pfam; PF14765; PS-DH; 1.
DR SMART; SM00827; PKS_AT; 1.
DR SMART; SM00829; PKS_ER; 1.
DR SMART; SM00825; PKS_KS; 1.
DR SUPFAM; SSF47336; SSF47336; 1.
DR SUPFAM; SSF50129; SSF50129; 1.
DR SUPFAM; SSF51735; SSF51735; 3.
DR SUPFAM; SSF52151; SSF52151; 1.
DR SUPFAM; SSF53901; SSF53901; 1.
DR SUPFAM; SSF55048; SSF55048; 1.
DR PROSITE; PS00606; B_KETOACYL_SYNTHASE; 1.
DR PROSITE; PS50075; CARRIER; 1.
PE 3: Inferred from homology;
KW Phosphopantetheine; Phosphoprotein; Reference proteome; Transferase.
FT CHAIN 1..2778
FT /note="Probable polyketide synthase 19"
FT /id="PRO_0000367829"
FT DOMAIN 2281..2358
FT /note="Carrier"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
FT REGION 157..210
FT /note="Beta-ketoacyl synthase"
FT REGION 629..662
FT /note="Acyl/malonyl transferase"
FT ACT_SITE 176
FT /note="For beta-ketoacyl synthase activity"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10022"
FT ACT_SITE 639
FT /note="For acyl/malonyl transferase activity"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10022"
FT MOD_RES 2318
FT /note="O-(pantetheine 4'-phosphoryl)serine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
SQ SEQUENCE 2778 AA; 314398 MW; 1E3CA2D73A46CBA9 CRC64;
MEFGNKEIAI VGIGFRIPQG KESINNGSVS HLWNNLKNGF SGIVETSERW SDNINLLGEV
NNKFGGLLPL KEWSDFDPVH FAINPSEVPL MDPQTRLLLK CTWEALEDAF IDPIDIRGSN
TSCFIGCSTL DYSTTNRDFN ETSENYFASN VLHTISNRLS FSYDIRGPSM TIDTACSSSL
NSITMGFQSI QNGTSNLSIV GGASLLLDPY VSKSFSFLNM LSKKGKCKPF DSEADGYIRA
ESCGIVILKP LSDAIRDGNN IYCVINSFSS NVDGGGLNDK SNFYSPSKQS QSDNIKLALK
SANMKASDIS FVECHGTGTP TGDPIEVEGV SMALNSSTTS TPSKPLLIGS LKSNIGHCEA
ASGVASLIKC CLMFKNKHYA PNVNFDQPNP KINFKDWNIK VVTEAIPFTN INEKPVSMVI
NNFGVTGSNC CLILSQFIEH SISLNGNNPS YPIESQQQIF LIPFSANSVK SLKNYEDLII
NDNNLSTNSF KEFVKNQIYS KSKKLYQRSV LISSNWDQLK TKNKYFKTSN DKSSNITIKR
NQPLIVIVFG GQGSQWNKMA QQLYECEPIF RSSMDKFNKE LSKYYGYSVL DKLRSIKDDD
IISIHQPIIA QPSILMLQIS LFELYKHWGI NVSFIVGHSL GEIATSYCSG MVDFQTVCKL
IYHRSISQNN TNGCGKMLSV NISHSEFIEL YSNKYPTIEV ACYNSPTSIV IAGNENILKE
ISLDLKENNI FCAFLGSLSS FHTSSQNSTK NEILPLEIPS RQSTIPTFST VTTNLFNHET
TPFNSSYVYE NIIQPVRFSQ TISNLYQHIE NNKLGNELIF IEVSPHPSLS FYLKQMIPKS
SSYFNSVSVL TSTNKKNSND LDEIHSTISQ IYCLGYDINF KCQFNHNDDD VNSIRNNSTI
ILPNYQFDEQ YYWKVDINFE QYRLNGPNVF NNLGKSMINY SSNNKSYESI IDINRNPFKY
LKDHIVKGKY YFPGIGYADN IMKLYPNKDI VINNLEFLAP FVLKENVKHI LQTNVYQLGN
TDYRVTFNIK DNKANQWVQT CTGNFQLISL KDNNNNNNNN HSSKYNINQL LSECNFTTLS
KQEVYKYSKL RSGITHLGTF QGIEEFHFGN DLTIARIQIN YENFDINGKP VYQTFDKSFF
NIALLDNCIQ AITGFITNSS QFVFERLEGL KVYSENIPTD KLKYKNIYCQ AKFISLEADS
YKSSVLVLLE DGTKLLEIEH ISFRSTLPLI DELLLNNPTN ELFTNNLQCK DSLVNILSID
NNETSSSSGS SNTVTEIIKQ TIKPIINEKI VFRILQSFSD SELSKQIIEA LNQIFDNSLQ
EIDIEFTIID NSNDKLPTLH DSSLIFKNDI TQLKPSYYDI IINNNNDETI IKPIFNILSS
NGLLLLIIED DIGIRFNINN LIGVGFNENK IQKSNKVIQS QKSTILSNEL TVVPNNKNDN
IIIYCEKHSK YTNEFKKLIS NNHTNRKQTT ISNINEFNQL LPSITNDSII YFIKSMEQLE
MNNFKQITME YIEINQQLLK HSLTCKHVLI TIDSQIKNYL SSSIIGASRY FNEFPSLNLY
SIDFDNQLSI SSLLNKIINQ LIENSNNHIQ REYIIRNNSI YYEILKNEKN IKSNFNSNSF
EDNDFMTLLD STNLEYKLAS KPKKLKKNEI EVKVLATGIN YKDYLIYRGL VVIDENVSIS
KNPLGLEFSG IITRISDENK NCEFKVGDNV FGVSHDATAS HVITDVLYVS HKPNNISHIE
AASLPIIFST CLHGMFNIGN FNIDDDEVIL IHSATGGIGL ATLEILKWKG HKSPIFVTVG
SKDKEQYLID NYGSFITGIY SSRNKNYVNE IKSKLNQLYG TTGKFNGVDL IINTLPNEFT
HSNFLCLKER GKIIDLSITH LNNNEFLNFN NFKFNKSYHN IEFMHINKRV VSRLLKSISN
ALNENKVKLI PITTFQIENV KEAIEYINQR KHIGKIVLDH SCSNGSIGSD GLLNQLIESD
NNEKNHTILK YDFKIDTKNI IGKNIIITGQ SGIILEILKW LIKYSPPTES FENIIILSKS
SLKWELELLI NKTISRKDNN TKFHFKIVDV GDSIEMRKSI NQILLENPNI DNIDSIFHYA
FTQVTKEVEE IDIESLDISH NAKTMGAINL HEISIEKSWK LKQFVMASSI ASLFGSFNQC
TYVSANLVLD SLSRYRKSIG LPSTCTNWGT IKSSGFVSRN DSVSKMLDDQ GFIPIPTNII
LGSLDLQLQN SNKYSNLIVS KFNYDSIKKF ASETSTFQRL DFILNSIKEK DNDNNGGENI
SISESIQMKF LNKISELLSI EQSKINTDIR LGEYGADSLT SVQLKNFIDK ENKSNVITLQ
QLQNNTIGVN IQIILEQIKK LDSNETKGKS KKIIKKDSAP SLEYWRNEMK LDESIQAIKM
NPIDFRNDSK VFLTGATGFL GVHLLSNLIK SPNCSVVYCL IRNKKSEPNP INAIINNLKH
HKLYHFHNEF ELSKVKVIVG NLASPLLGLS KLDFGFVSNQ INLIINSGAD INLASNYEES
KVVNIGGLIE LIKLSTTGDY QKPIVGFSSI SVFFESPNCK EFDEETVIPT IENINNLPGG
YMKSKVVVEN LFREAAKRGI PSMLIRLPII FSHEETGIGH DSDFFQLIIQ SCYAVKKYPN
IDKNILTSPI GWIGLNTIKM IGNEKCWNKS SSNQLNIYSL NSEVSSIKSS FSFLEKQYGC
EMVEYEQWKN IINQSKILSC IKFKTFHSLD RLNGVYNLGH GFGVSKKTKE LLQSMNSYEG
GMVNEKIIQN HINYIFKN