PKS1_COCH4
ID PKS1_COCH4 Reviewed; 2528 AA.
AC N4WHE3; Q92217;
DT 02-NOV-2016, integrated into UniProtKB/Swiss-Prot.
DT 26-JUN-2013, sequence version 1.
DT 03-AUG-2022, entry version 44.
DE RecName: Full=Reducing polyketide synthase PKS1 {ECO:0000303|PubMed:8953776};
DE EC=2.3.1.- {ECO:0000305|PubMed:8953776};
DE AltName: Full=T-toxin biosynthesis protein PKS1 {ECO:0000305};
GN Name=PKS1 {ECO:0000303|PubMed:8953776}; ORFNames=COCC4DRAFT_45906;
OS Cochliobolus heterostrophus (strain C4 / ATCC 48331 / race T) (Southern
OS corn leaf blight fungus) (Bipolaris maydis).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes;
OC Pleosporomycetidae; Pleosporales; Pleosporineae; Pleosporaceae; Bipolaris.
OX NCBI_TaxID=665024;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], FUNCTION, AND DISRUPTION PHENOTYPE.
RC STRAIN=C4 / ATCC 48331 / race T;
RX PubMed=8953776; DOI=10.2307/3870419;
RA Yang G., Rose M.S., Turgeon B.G., Yoder O.C.;
RT "A polyketide synthase is required for fungal virulence and production of
RT the polyketide T-toxin.";
RL Plant Cell 8:2139-2150(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C4 / ATCC 48331 / race T;
RX PubMed=23236275; DOI=10.1371/journal.ppat.1003037;
RA Ohm R.A., Feau N., Henrissat B., Schoch C.L., Horwitz B.A., Barry K.W.,
RA Condon B.J., Copeland A.C., Dhillon B., Glaser F., Hesse C.N., Kosti I.,
RA LaButti K., Lindquist E.A., Lucas S., Salamov A.A., Bradshaw R.E.,
RA Ciuffetti L., Hamelin R.C., Kema G.H.J., Lawrence C., Scott J.A.,
RA Spatafora J.W., Turgeon B.G., de Wit P.J.G.M., Zhong S., Goodwin S.B.,
RA Grigoriev I.V.;
RT "Diverse lifestyles and strategies of plant pathogenesis encoded in the
RT genomes of eighteen Dothideomycetes fungi.";
RL PLoS Pathog. 8:E1003037-E1003037(2012).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C4 / ATCC 48331 / race T;
RX PubMed=23357949; DOI=10.1371/journal.pgen.1003233;
RA Condon B.J., Leng Y., Wu D., Bushley K.E., Ohm R.A., Otillar R., Martin J.,
RA Schackwitz W., Grimwood J., MohdZainudin N., Xue C., Wang R., Manning V.A.,
RA Dhillon B., Tu Z.J., Steffenson B.J., Salamov A., Sun H., Lowry S.,
RA LaButti K., Han J., Copeland A., Lindquist E., Barry K., Schmutz J.,
RA Baker S.E., Ciuffetti L.M., Grigoriev I.V., Zhong S., Turgeon B.G.;
RT "Comparative genome structure, secondary metabolite, and effector coding
RT capacity across Cochliobolus pathogens.";
RL PLoS Genet. 9:E1003233-E1003233(2013).
RN [4]
RP FUNCTION, AND DISRUPTION PHENOTYPE.
RC STRAIN=C4 / ATCC 48331 / race T;
RX PubMed=12236595; DOI=10.1094/mpmi.2002.15.9.883;
RA Rose M.S., Yun S.-H., Asvarak T., Lu S.-W., Yoder O.C., Turgeon B.G.;
RT "A decarboxylase encoded at the Cochliobolus heterostrophus translocation-
RT associated Tox1B locus is required for polyketide (T-toxin) biosynthesis
RT and high virulence on T-cytoplasm maize.";
RL Mol. Plant Microbe Interact. 15:883-893(2002).
RN [5]
RP FUNCTION.
RX PubMed=16529376; DOI=10.1094/mpmi-19-0139;
RA Baker S.E., Kroken S., Inderbitzin P., Asvarak T., Li B.Y., Shi L.,
RA Yoder O.C., Turgeon B.G.;
RT "Two polyketide synthase-encoding genes are required for biosynthesis of
RT the polyketide virulence factor, T-toxin, by Cochliobolus heterostrophus.";
RL Mol. Plant Microbe Interact. 19:139-149(2006).
RN [6]
RP FUNCTION.
RC STRAIN=C4 / ATCC 48331 / race T;
RX PubMed=20192833; DOI=10.1094/mpmi-23-4-0458;
RA Inderbitzin P., Asvarak T., Turgeon B.G.;
RT "Six new genes required for production of T-toxin, a polyketide determinant
RT of high virulence of Cochliobolus heterostrophus to maize.";
RL Mol. Plant Microbe Interact. 23:458-472(2010).
CC -!- FUNCTION: Reducing polyketide synthase (PKS); part of the Tox1A locus,
CC one of the 2 loci that mediate the biosynthesis of T-toxin, a family of
CC linear polyketides 37 to 45 carbons in length, of which the major
CC component is 41 carbons, and which leads to high virulence to maize
CC (PubMed:8953776, PubMed:20192833). One of the PKSs (PKS1 or PKS2) could
CC synthesize a precursor, used subsequently by the other PKS as starter
CC unit, to add additional carbons (PubMed:16529376). Variability in the
CC length of the final carbon backbone C35-47 could be achieved by varying
CC the number of condensation cycles, or use of different starter or
CC extender units or might be due to decarboxylation of the penultimate
CC product, catalyzed by DEC1 (PubMed:12236595). Additional proteins are
CC required for the biosynthesis of T-toxin, including oxidoreductases
CC RED1, RED2, RED3, LAM1 and OXI1, as well as esterase TOX9
CC (PubMed:20192833). {ECO:0000269|PubMed:12236595,
CC ECO:0000269|PubMed:16529376, ECO:0000269|PubMed:20192833,
CC ECO:0000269|PubMed:8953776}.
CC -!- PATHWAY: Mycotoxin biosynthesis. {ECO:0000269|PubMed:8953776}.
CC -!- DISRUPTION PHENOTYPE: Leads to the loss of T-Toxin production,
CC resulting in low virulence for maize (PubMed:8953776, PubMed:12236595).
CC {ECO:0000269|PubMed:12236595, ECO:0000269|PubMed:8953776}.
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DR EMBL; U68040; AAB08104.3; -; Genomic_DNA.
DR EMBL; KB733517; ENH98624.1; -; Genomic_DNA.
DR RefSeq; XP_014072534.1; XM_014217059.1.
DR AlphaFoldDB; N4WHE3; -.
DR SMR; N4WHE3; -.
DR PRIDE; N4WHE3; -.
DR EnsemblFungi; ENH98624; ENH98624; COCC4DRAFT_45906.
DR GeneID; 25845241; -.
DR HOGENOM; CLU_000022_31_1_1; -.
DR OrthoDB; 19161at2759; -.
DR PHI-base; PHI:55; -.
DR Proteomes; UP000012338; Unassembled WGS sequence.
DR GO; GO:0016746; F:acyltransferase activity; IEA:UniProtKB-KW.
DR GO; GO:0016491; F:oxidoreductase activity; IEA:UniProtKB-KW.
DR GO; GO:0031177; F:phosphopantetheine binding; IEA:InterPro.
DR GO; GO:0044550; P:secondary metabolite biosynthetic process; IEA:UniProt.
DR Gene3D; 1.10.1200.10; -; 1.
DR Gene3D; 3.10.129.110; -; 1.
DR Gene3D; 3.40.366.10; -; 1.
DR Gene3D; 3.40.47.10; -; 1.
DR Gene3D; 3.40.50.150; -; 1.
DR InterPro; IPR001227; Ac_transferase_dom_sf.
DR InterPro; IPR036736; ACP-like_sf.
DR InterPro; IPR014043; Acyl_transferase.
DR InterPro; IPR016035; Acyl_Trfase/lysoPLipase.
DR InterPro; IPR013154; ADH_N.
DR InterPro; IPR011032; GroES-like_sf.
DR InterPro; IPR014031; Ketoacyl_synth_C.
DR InterPro; IPR014030; Ketoacyl_synth_N.
DR InterPro; IPR016036; Malonyl_transacylase_ACP-bd.
DR InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR InterPro; IPR032821; PKS_assoc.
DR InterPro; IPR020841; PKS_Beta-ketoAc_synthase_dom.
DR InterPro; IPR020807; PKS_dehydratase.
DR InterPro; IPR042104; PKS_dehydratase_sf.
DR InterPro; IPR020843; PKS_ER.
DR InterPro; IPR013968; PKS_KR.
DR InterPro; IPR020806; PKS_PP-bd.
DR InterPro; IPR009081; PP-bd_ACP.
DR InterPro; IPR006162; Ppantetheine_attach_site.
DR InterPro; IPR029063; SAM-dependent_MTases_sf.
DR InterPro; IPR016039; Thiolase-like.
DR Pfam; PF00698; Acyl_transf_1; 1.
DR Pfam; PF08240; ADH_N; 1.
DR Pfam; PF16197; KAsynt_C_assoc; 1.
DR Pfam; PF00109; ketoacyl-synt; 1.
DR Pfam; PF02801; Ketoacyl-synt_C; 1.
DR Pfam; PF08659; KR; 1.
DR Pfam; PF00550; PP-binding; 1.
DR Pfam; PF14765; PS-DH; 1.
DR SMART; SM00827; PKS_AT; 1.
DR SMART; SM00826; PKS_DH; 1.
DR SMART; SM00829; PKS_ER; 1.
DR SMART; SM00825; PKS_KS; 1.
DR SMART; SM00823; PKS_PP; 1.
DR SUPFAM; SSF47336; SSF47336; 1.
DR SUPFAM; SSF50129; SSF50129; 1.
DR SUPFAM; SSF51735; SSF51735; 2.
DR SUPFAM; SSF52151; SSF52151; 1.
DR SUPFAM; SSF53901; SSF53901; 1.
DR SUPFAM; SSF55048; SSF55048; 1.
DR PROSITE; PS50075; CARRIER; 1.
DR PROSITE; PS00012; PHOSPHOPANTETHEINE; 1.
PE 3: Inferred from homology;
KW Acyltransferase; Multifunctional enzyme; NADP; Oxidoreductase;
KW Phosphopantetheine; Phosphoprotein; Transferase.
FT CHAIN 1..2528
FT /note="Reducing polyketide synthase PKS1"
FT /id="PRO_0000437634"
FT DOMAIN 2442..2519
FT /note="Carrier"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
FT REGION 14..439
FT /note="Ketosynthase (KS) domain"
FT /evidence="ECO:0000255"
FT REGION 573..868
FT /note="Malonyl-CoA:ACP transacylase (MAT)"
FT /evidence="ECO:0000255"
FT REGION 956..1277
FT /note="Dehydratase (DH) domain"
FT /evidence="ECO:0000255"
FT REGION 1827..2139
FT /note="Enoyl reductase (ER) domain"
FT /evidence="ECO:0000255"
FT REGION 2164..2341
FT /note="Ketoreductase (KR) domain"
FT /evidence="ECO:0000255"
FT MOD_RES 2479
FT /note="O-(pantetheine 4'-phosphoryl)serine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
SQ SEQUENCE 2528 AA; 275297 MW; AC6429AF6734E3C3 CRC64;
MTVRDSKTGG ITPIAVVGMS FRGPGDATNV EKLLNMISEG RESRAEVQAK KWDPEGFYHP
DSSRHGTHNV EYGHWFQQDV YNFDAPFFNV SPAEAAALDP QQRMLLECSY EAFENSGTPM
SKIVGTDTSV FVSSFATDYT DMLWRDPESV PMYQCTNSGF SRSNLANRIS YSFDLKGPSV
LVDTACSGGL TALHLACQSL LVGDVRQALA AGSSLILGPE MMVTMSMMKF LSPDGRCYAF
DERANGYARG EGVAVLLLKR LEDALADNDT IRAVIRGTGC NQDGKTPGIT MPNSVSQEAL
IRSVYKKAAL DPLDTTYVEC HGTGTQAGDT TEASALSKVF SPGRRLPLLI GSVKTNIGHL
EGASGLAGVV KSILMLEQGV ILPNRNFERP NTKIPLEKWN LRVPTTLECW NNVKTRRVSI
NSFGYGGANV HAILESATDF LRDNSMGTDS TRFASRRSVV VGNVGQTKPA VSLVQDMSSN
DRSHEDPTPL LFALSAFDSS AGDAWARSLS IYLSQRQGSD EKTILSSLAY TLSDRRTWHP
WKAALSATTI QELITKLEKV RFVNMAPRHN IGFVFTGQGA QWCGMGRELI SIFPRFRQSL
IACDIALQSF GADFHVIDEL EADVESSRIN KALYSQPLCT ALQIALVDLL VSWGIYAQSV
TGHSSGEIAA AYAAGALSLS DAMLVAYARG CATANLAKKG AKGAMAAVSM ETQELSHILS
ALENGKVGIA CFNSPTSCTV SGDKSALDEL QDVLRQKGVY NRRLIVDVAY HSHHMELIAD
SYRSAISSIQ PLPGSDVKFF SSVTGELLDK NKLGVDYWVS NLVGQVKFAQ SLSSLVSSHH
GTGTPQIQAL IEIGPHAALG GPISQVIDSE PLANPTGYFS ALVRKKNAVT TILSLAADLF
LSGYPIQLSA VNQNCNSRHT PLVDLPSYSW NHSKAYTAES RISKTYRQRR YPRLDLIGVF
DVHSSVLEPR WRQVIRLSEL PWLQDHKIQS SILYPVAGYI AMAIEAATQR NQMREMGNDI
LGYQFRDVAI SSALTIPDMP GQVEVFITLR SFSESVRSPS NLWDEFSISS VNDENRWTEH
CRGLISVLKS SKLSNLVNGK MQDASTIACQ HDLREVFATC CKTEWDVKDM YEHFWETGMQ
YGPTFANLCD VRCTSNKCIG KVKVPDTAAV MPMKHEAPFI IHPGTLDSII QTYLPALVQA
GHLKSATIPV AIESMFISRN VTRQAGDLLT SYASSTRKDY RYFSTSMSVF ADGPSSENQL
VITIDDMTLV ALDRPNSSEE SGEALPLAFN LHWKPDVDML TEEQLVEMIN ASTKVKDHIA
AKKMKQTAAQ LGKEILARVP FEQAQVVGES SRHLWKLLHA SLESLSTPDH RGALDEISSL
KNVDSTLAQA ADRLSNVLTG RVAPSDVASM YDLMEAVRIP ELYDNNLPTA TYLHLLGHKK
PSLRVLTVGP QSGPTSLNLL MLLAELGGGE IPFAVLHHSD AELNIDQTVR SRFPSWADSV
GFRDVFNESG ASQQNPPIVN ETYDIVVAFN VLGSSPGFSK TLSAAAPLLN ARGKILLVDN
SHKSPMAALV WGPLPSFLST WVDEKSADSP DVDCAVQSMG YDIYARLCPN VTVIQRAAQV
QKAEKTIGLD VLVVTDGEPA GVDLQQLQTL CEDQYAEVHV ASLEHARPRP GQACIVLSEL
SRPVLAAPTA AEWEAVKRIT DTCSGIVWVT RGAADNVCSN PQVSLIQGFA RTVRAEAGDK
PITTLDLDND KVLSAQAAAA YIAAVFQRMM QGGEDIDVEL QERRGILHVA RLIEDGDAAK
QLQGEATAME LRLDQAGPCR LFAGTPGLLD SLHFTVDDRV QESLETGQIE VQVHATGINF
KDVMMAMGQI AVEDLGCECS GVVSAVGDGV VGLRVGDRVA CMGPGSFCTQ LRVDARLAHR
IPHHMELETA AALPITYVTA YHSIHNIAHL RHGETILIHA AAGGLGQALV ELSQLVGARV
LVTVGSTEKK RLIMQRFRLS EEDILFSRDT SFVHDVMRLT NGRGVDVIMN SLAGESLRQS
WTCIAPNGRF VELGQRDITV NSRLDMAPFA RNVSFTAYNL AYMLRHDPQA AHEVLAEVLA
LYDQGKLRGP EPLEKCTFSQ LGNAFRKIQT GRHMGKMVAV ANPDDMVWYK PPPASRRTLF
RPDASYLLVG GVGGLGSATA LWMSTRGARH LLLLNRSGAD TEAARTTLAT LRANGCTATV
LACDVADKAQ LSSVLAEARS NWPPIRGVIQ GAMVLRDSML ANMTLEDYMA VVRPKVQGTW
NLQTHLPADL DFFILESSIS GIIGNPGQAA YAAANTFLDA FARWRRARCQ PATVIDIGAV
HGIGYLERNV DVKLSMERQG FAFTDEQLLM RLLEFAISHS SREPHRAQIV TGLGPWHPDT
SLPGLNAPLF SRYRMLSCQN STGSTDVDTL RGILAQSSSF DSAVTIVLSA LVDQVVSRTE
IPIENVHTTK SLQDYGIDSL VAVELRNWLI KDMDSVVPML ELLGAESLSA LAVKIAARSQ
LISTNNRG