PKS21_DICDI
ID PKS21_DICDI Reviewed; 2779 AA.
AC B0G138;
DT 05-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 18-MAR-2008, sequence version 1.
DT 03-AUG-2022, entry version 85.
DE RecName: Full=Probable polyketide synthase 21;
DE Short=dipks21;
DE EC=2.3.1.-;
GN Name=pks21; ORFNames=DDB_G0282029;
OS Dictyostelium discoideum (Slime mold).
OC Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales;
OC Dictyosteliaceae; Dictyostelium.
OX NCBI_TaxID=44689;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AX4;
RX PubMed=15875012; DOI=10.1038/nature03481;
RA Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R.,
RA Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B.,
RA Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T.,
RA Lehmann R., Hamlin N., Davies R., Gaudet P., Fey P., Pilcher K., Chen G.,
RA Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N.,
RA Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E.,
RA Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N.,
RA Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D.,
RA Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T.,
RA Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D.,
RA Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A.,
RA Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M.,
RA Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A.,
RA Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y.,
RA Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C.,
RA Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R.,
RA Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.;
RT "The genome of the social amoeba Dictyostelium discoideum.";
RL Nature 435:43-57(2005).
RN [2]
RP IDENTIFICATION.
RX PubMed=17660200; DOI=10.1093/bioinformatics/btm381;
RA Zucko J., Skunca N., Curk T., Zupan B., Long P.F., Cullum J., Kessin R.H.,
RA Hranueli D.;
RT "Polyketide synthase genes and the natural products potential of
RT Dictyostelium discoideum.";
RL Bioinformatics 23:2543-2549(2007).
CC -!- FUNCTION: Probable polyketide synthase. {ECO:0000250}.
CC -!- COFACTOR:
CC Name=pantetheine 4'-phosphate; Xref=ChEBI:CHEBI:47942;
CC Evidence={ECO:0000250};
CC Note=Binds 1 phosphopantetheine covalently. {ECO:0000250};
CC -!- DOMAIN: Modular protein that is responsible for the completion of one
CC condensation-processing cycle. The beta-ketoacyl synthase region is
CC responsible for the actual condensation reaction while the acyl/malonyl
CC transferase region is responsible for incorporating carboxylic acids
CC units onto an acyl carrier protein (ACP) domain (By similarity).
CC {ECO:0000250}.
CC -!- MISCELLANEOUS: Encoded by one of the numerous copies of polyketide
CC synthase genes and clustered as a triplet pks19/pks20/pks21 in
CC chromosome 3.
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DR EMBL; AAFI02000044; EDR41070.1; -; Genomic_DNA.
DR RefSeq; XP_001733001.1; XM_001732949.1.
DR SMR; B0G138; -.
DR STRING; 44689.DDB0235174; -.
DR PaxDb; B0G138; -.
DR PRIDE; B0G138; -.
DR EnsemblProtists; EDR41070; EDR41070; DDB_G0282029.
DR GeneID; 8623374; -.
DR KEGG; ddi:DDB_G0282029; -.
DR dictyBase; DDB_G0282029; pks21.
DR eggNOG; KOG1178; Eukaryota.
DR eggNOG; KOG1202; Eukaryota.
DR HOGENOM; CLU_000022_31_0_1; -.
DR InParanoid; B0G138; -.
DR PhylomeDB; B0G138; -.
DR PRO; PR:B0G138; -.
DR Proteomes; UP000002195; Chromosome 3.
DR GO; GO:0004315; F:3-oxoacyl-[acyl-carrier-protein] synthase activity; IEA:InterPro.
DR GO; GO:0016491; F:oxidoreductase activity; IEA:InterPro.
DR GO; GO:0006633; P:fatty acid biosynthetic process; IEA:InterPro.
DR CDD; cd05235; SDR_e1; 1.
DR Gene3D; 1.10.1200.10; -; 1.
DR Gene3D; 3.10.129.110; -; 1.
DR Gene3D; 3.40.366.10; -; 1.
DR Gene3D; 3.40.47.10; -; 1.
DR InterPro; IPR001227; Ac_transferase_dom_sf.
DR InterPro; IPR036736; ACP-like_sf.
DR InterPro; IPR014043; Acyl_transferase.
DR InterPro; IPR016035; Acyl_Trfase/lysoPLipase.
DR InterPro; IPR013120; Far_NAD-bd.
DR InterPro; IPR011032; GroES-like_sf.
DR InterPro; IPR018201; Ketoacyl_synth_AS.
DR InterPro; IPR014031; Ketoacyl_synth_C.
DR InterPro; IPR014030; Ketoacyl_synth_N.
DR InterPro; IPR016036; Malonyl_transacylase_ACP-bd.
DR InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR InterPro; IPR032821; PKS_assoc.
DR InterPro; IPR020841; PKS_Beta-ketoAc_synthase_dom.
DR InterPro; IPR020807; PKS_dehydratase.
DR InterPro; IPR042104; PKS_dehydratase_sf.
DR InterPro; IPR020843; PKS_ER.
DR InterPro; IPR013968; PKS_KR.
DR InterPro; IPR009081; PP-bd_ACP.
DR InterPro; IPR010080; Thioester_reductase-like_dom.
DR InterPro; IPR016039; Thiolase-like.
DR Pfam; PF00698; Acyl_transf_1; 1.
DR Pfam; PF16197; KAsynt_C_assoc; 1.
DR Pfam; PF00109; ketoacyl-synt; 1.
DR Pfam; PF02801; Ketoacyl-synt_C; 1.
DR Pfam; PF08659; KR; 1.
DR Pfam; PF07993; NAD_binding_4; 1.
DR Pfam; PF00550; PP-binding; 1.
DR Pfam; PF14765; PS-DH; 1.
DR SMART; SM00827; PKS_AT; 1.
DR SMART; SM00829; PKS_ER; 1.
DR SMART; SM00825; PKS_KS; 1.
DR SUPFAM; SSF47336; SSF47336; 1.
DR SUPFAM; SSF50129; SSF50129; 1.
DR SUPFAM; SSF51735; SSF51735; 3.
DR SUPFAM; SSF52151; SSF52151; 1.
DR SUPFAM; SSF53901; SSF53901; 1.
DR SUPFAM; SSF55048; SSF55048; 1.
DR PROSITE; PS00606; B_KETOACYL_SYNTHASE; 1.
DR PROSITE; PS50075; CARRIER; 1.
PE 3: Inferred from homology;
KW Phosphopantetheine; Phosphoprotein; Reference proteome; Transferase.
FT CHAIN 1..2779
FT /note="Probable polyketide synthase 21"
FT /id="PRO_0000371384"
FT DOMAIN 2282..2359
FT /note="Carrier"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
FT REGION 157..210
FT /note="Beta-ketoacyl synthase"
FT REGION 632..665
FT /note="Acyl/malonyl transferase"
FT ACT_SITE 176
FT /note="For beta-ketoacyl synthase activity"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10022"
FT ACT_SITE 642
FT /note="For acyl/malonyl transferase activity"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10022"
FT MOD_RES 2319
FT /note="O-(pantetheine 4'-phosphoryl)serine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
SQ SEQUENCE 2779 AA; 314195 MW; 8853A4F20089A375 CRC64;
MKLENKEIAI VGIGFRIPQG KESINNGSVS HLWNNLKNGF SGIVETSERW SDNINLLGEV
NNKFGGLLPL KEWSDFDPVH FAINPSEVPL MDPQTRLLLK CTWEALEDAF IDPIDIRGSN
TSCFIGCSTL DYSTTNRDFN ETSENYFASN VLHTISNRLS FSYDIRGPSM TIDTACSSSL
NSIAMGFQSI QNGTSNLSIV GGVSLLLDPY ISKSFSFLNM LSKKGKCKPF DSEADGYIRA
ESCGIVILKP LSDAIRDGNN IYCVINSFSS NVDGGGLNDK SNFYSPSKQS QSDNIKLALK
SANMKASDIS FVECHGTGTP TGDPIEVEGV SMALNSSKTS TPSKPLLIGS LKSNIGHSEA
ASGVASLIKC CLMFKNKHYA PNVNFDQPNP KINFKDWNIK VVTEAIPFTN NNEKPVSMVI
NNFGVTGSNC CLILSQFIEQ SINQNGNGHS YPAESQQQQQ QRFLIPFSAN SVKSLKNYED
LIINDIKIST NSFKEFVKNQ IYSKSKKLYQ RSVLISSNWD QLKTKNKYFK TNNDKSSNIT
IKRNQPLVVI VFGGQGSQWN KMAQQLYECE PIFRSSMDKF NKELSKYYGY SVLDKLRSIK
DDDIISIHQP IIAQPSILML QISLFELYKH WGINVSFIVG HSLGEIATSY CSGMVDFQTV
CKLIYHRSIS QNNTNGCGKM LSVNISHSEF IELYSNKYPT IEVACYNSPT SIVIAGNENI
LKEISLNLKE NNIFCAFLGS LSSFHTSSQH STKNEILPLD IPSKQSRIPT FSTVTTNLFN
HETTPFNSSY VYENIIQPVR FSQTISNLYQ HIENNKLGNE LIFIEVSPHP SLSFYLKQMI
PKSSSYFNSV SVLTSTNKKN SNDLDEIHST ISQIYCLGYD VNFKCQFNHN DDDVSSIRNS
KVNISLPNYQ FDEQHYWKVD INFEQYRLNG PNVFNSLGKS MINYSSNNKS YESIIDINRN
PFKYLKDHIV KGKYYFPGIG YADNIMKLYP NQDIIINNLE FLAPFVLKEN VKHTLQTNVY
QLGNTDYRVT FNIKDNKTNQ WVQTCTGNFQ LISLKDNNND HSSKYDINQL LSECNFTTLS
KQEVYKHSRS ITGITHLGAF QGIEELYFGN DCIISKIQVN TENFDIDGKP VYQTYDKSFF
NTALLDSCSQ TIVGFITNSS QFVFERLEGL KVYSENIPTD KLKYKNIYCQ AKFISLESDS
YKSSVLVLLE DGTKLLEMDC ISLHSTLPLL NSLLINNPTT ELFTNNLQCK DSLVNILSID
NNQTFSSISS SNTVTEIIKQ TIKPIINEKI VFRILQSFSD LELSKQIIET LNQIFDDNSL
QEIDIEFTII DNSNDKLPTL HDSSLIFKND ITQLKPSYYD IIINNNNDGD DETIIKSIFN
ILSSNGLLLI IGDDIGDKYN IDSLINLGFN ENKIQKSNKV IQSQKSTILS NELTVVPNNK
NDNIIIYCEK ESKYTNEFMK LISNNHISCK QTIISNINEF NQLLPSITND SIIYFIKSME
QLEMNNFKQI TMEYIEINQQ LLKHSLTCKH VLITIDSQIK NYLSSSIIGT ARYFNEFPSL
NLYSIDFDNQ LSISSLLNKI INQLIENSNN HIQREYIIRN NSIYYEILKN EKNIKSNFNS
NSFEDNDFMT LLDSTNLEYK LASKPKKLKK NQIEVKVLAT GINYKDYLIY RGLVVIDENV
SISKNPLGLE FSGIITRISN ENQNCEFKVG DNVFGIACDT TASHVIADVL YVSHKPENIS
HVEAASLPVI FSTCLHGMFN IGNFNIDDDE VILIHSATGG IGLATLEILK WKGHKSPIFV
TVGSKDKEQY LIDNYGSFIT GIYSSRNKNY VNEIKSKLNQ LYGTTGKFNG VDLIINTLPN
EFTHSNFLCL KERGKIIDLS ITHLNNNEFL NFNNFKFNKS YHNIELMHIN KKVVSRLLKS
ISNALNENKL KPIPITTFQI EDVKEAIEYI NQRKHIGKIV LDHSCSNGSI GSDGLLNQLI
ESDNNEKNHT ILKYDFKIDT KNIIGKNIII TGQSGIILEI LKWLIKYSPT ESFENIIILS
KSSLKWELEL LINKTISRKD NNTKFHFKSV DVGDPIEMRK SINQILLENP NIDNIDSIFH
YAFAQITKEV EEIDIESLDI SHNAKTMGAI NLHEISIEKS WKLKQFVMAS SIASLFGSFN
QCSYVSANLV LDSLSRYRKS IGLPSTCTNW GAIKSAGFVS RNELVSKMLD DQGFIPIPTN
IILGSLDLQL QNSNKNSNLI VSKFNYDSIK KLSSETSTFQ RLDFILNSIK EKDNDSNGGE
NSVSESIQTK ILNKISELLS IEQSKINTDI RLSDYGADSL TSVQLKNFID KDIKSNVITL
QQLQNNTIDM NIQTILEQIK KLDSNETKGK SKNIIKKDSA PTLDYWRNEM KLDESIQAIK
MNPIDFRNDS KVFLTGATGF LGVHLLSNLI KSPNCSVVYC LIRNKKSEPN PINAIINNLK
HHKLYHFHNE FELSKIKVIV GNLASPLLGL SKLDFDYISN QINLIINSGA DINLASNYEE
SKVVNIGGFI ELIKLSTTGD YQKPIVGFSS VSVFFNASNC KEFDEETVIP TIENINNLPG
GYMKSKVVVE NLLREVAKRG IPSMLIRPPI IFSHEETGIG HDSDFFQLII QSCYAVKKYP
KIDKNILTSP IGWISLNTIK MIGNEKCWNK SSSNQLNIYS LNSEVSAMNP SFSFLEKQYG
CEMVEYEQWK NIINQSKILS CVKLKTFHSL DDLYNIYNLG NGFGVSKKTK ELLQSMNSYE
GGMVNEKMIQ NHINYIFKN