PKS27_DICDI
ID PKS27_DICDI Reviewed; 2684 AA.
AC Q54G30;
DT 14-APR-2009, integrated into UniProtKB/Swiss-Prot.
DT 24-MAY-2005, sequence version 1.
DT 03-AUG-2022, entry version 106.
DE RecName: Full=Probable polyketide synthase 27;
DE Short=dipks27;
DE EC=2.3.1.-;
GN Name=pks27; ORFNames=DDB_G0290467;
OS Dictyostelium discoideum (Slime mold).
OC Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales;
OC Dictyosteliaceae; Dictyostelium.
OX NCBI_TaxID=44689;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AX4;
RX PubMed=15875012; DOI=10.1038/nature03481;
RA Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R.,
RA Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B.,
RA Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T.,
RA Lehmann R., Hamlin N., Davies R., Gaudet P., Fey P., Pilcher K., Chen G.,
RA Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N.,
RA Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E.,
RA Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N.,
RA Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D.,
RA Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T.,
RA Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D.,
RA Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A.,
RA Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M.,
RA Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A.,
RA Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y.,
RA Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C.,
RA Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R.,
RA Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.;
RT "The genome of the social amoeba Dictyostelium discoideum.";
RL Nature 435:43-57(2005).
RN [2]
RP IDENTIFICATION.
RX PubMed=17660200; DOI=10.1093/bioinformatics/btm381;
RA Zucko J., Skunca N., Curk T., Zupan B., Long P.F., Cullum J., Kessin R.H.,
RA Hranueli D.;
RT "Polyketide synthase genes and the natural products potential of
RT Dictyostelium discoideum.";
RL Bioinformatics 23:2543-2549(2007).
CC -!- FUNCTION: Probable polyketide synthase. {ECO:0000250}.
CC -!- COFACTOR:
CC Name=pantetheine 4'-phosphate; Xref=ChEBI:CHEBI:47942;
CC Evidence={ECO:0000250};
CC Note=Binds 1 phosphopantetheine covalently. {ECO:0000250};
CC -!- DOMAIN: Modular protein that is responsible for the completion of one
CC condensation-processing cycle. The beta-ketoacyl synthase region is
CC responsible for the actual condensation reaction while the acyl/malonyl
CC transferase region is responsible for incorporating carboxylic acids
CC units onto an acyl carrier protein (ACP) domain (By similarity).
CC {ECO:0000250}.
CC -!- MISCELLANEOUS: Encoded by one of the numerous copies of polyketide
CC synthase genes and clustered as a pair pks27/pks28 in chromosome 5.
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DR EMBL; AAFI02000163; EAL62249.1; -; Genomic_DNA.
DR RefSeq; XP_635742.1; XM_630650.1.
DR AlphaFoldDB; Q54G30; -.
DR SMR; Q54G30; -.
DR STRING; 44689.DDB0235220; -.
DR PaxDb; Q54G30; -.
DR EnsemblProtists; EAL62249; EAL62249; DDB_G0290467.
DR GeneID; 8627660; -.
DR KEGG; ddi:DDB_G0290467; -.
DR dictyBase; DDB_G0290467; pks27.
DR eggNOG; KOG1202; Eukaryota.
DR HOGENOM; CLU_000022_31_5_1; -.
DR InParanoid; Q54G30; -.
DR OMA; WLPDFDF; -.
DR PhylomeDB; Q54G30; -.
DR PRO; PR:Q54G30; -.
DR Proteomes; UP000002195; Chromosome 5.
DR GO; GO:0004315; F:3-oxoacyl-[acyl-carrier-protein] synthase activity; IEA:InterPro.
DR GO; GO:0016491; F:oxidoreductase activity; IEA:InterPro.
DR GO; GO:0006633; P:fatty acid biosynthetic process; IEA:InterPro.
DR Gene3D; 1.10.1200.10; -; 1.
DR Gene3D; 3.10.129.110; -; 1.
DR Gene3D; 3.40.366.10; -; 1.
DR Gene3D; 3.40.47.10; -; 1.
DR Gene3D; 3.40.50.150; -; 1.
DR InterPro; IPR001227; Ac_transferase_dom_sf.
DR InterPro; IPR036736; ACP-like_sf.
DR InterPro; IPR014043; Acyl_transferase.
DR InterPro; IPR016035; Acyl_Trfase/lysoPLipase.
DR InterPro; IPR011032; GroES-like_sf.
DR InterPro; IPR018201; Ketoacyl_synth_AS.
DR InterPro; IPR014031; Ketoacyl_synth_C.
DR InterPro; IPR014030; Ketoacyl_synth_N.
DR InterPro; IPR016036; Malonyl_transacylase_ACP-bd.
DR InterPro; IPR013217; Methyltransf_12.
DR InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR InterPro; IPR032821; PKS_assoc.
DR InterPro; IPR020841; PKS_Beta-ketoAc_synthase_dom.
DR InterPro; IPR020807; PKS_dehydratase.
DR InterPro; IPR042104; PKS_dehydratase_sf.
DR InterPro; IPR020843; PKS_ER.
DR InterPro; IPR013968; PKS_KR.
DR InterPro; IPR009081; PP-bd_ACP.
DR InterPro; IPR029063; SAM-dependent_MTases_sf.
DR InterPro; IPR016039; Thiolase-like.
DR Pfam; PF00698; Acyl_transf_1; 1.
DR Pfam; PF16197; KAsynt_C_assoc; 1.
DR Pfam; PF00109; ketoacyl-synt; 1.
DR Pfam; PF02801; Ketoacyl-synt_C; 1.
DR Pfam; PF08659; KR; 1.
DR Pfam; PF08242; Methyltransf_12; 1.
DR Pfam; PF14765; PS-DH; 1.
DR SMART; SM00827; PKS_AT; 1.
DR SMART; SM00829; PKS_ER; 1.
DR SMART; SM00825; PKS_KS; 1.
DR SUPFAM; SSF47336; SSF47336; 1.
DR SUPFAM; SSF50129; SSF50129; 1.
DR SUPFAM; SSF51735; SSF51735; 2.
DR SUPFAM; SSF52151; SSF52151; 1.
DR SUPFAM; SSF53335; SSF53335; 1.
DR SUPFAM; SSF53901; SSF53901; 1.
DR SUPFAM; SSF55048; SSF55048; 1.
DR PROSITE; PS00606; B_KETOACYL_SYNTHASE; 1.
DR PROSITE; PS50075; CARRIER; 1.
PE 3: Inferred from homology;
KW Phosphopantetheine; Phosphoprotein; Reference proteome; Transferase.
FT CHAIN 1..2684
FT /note="Probable polyketide synthase 27"
FT /id="PRO_0000369418"
FT DOMAIN 2585..2662
FT /note="Carrier"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
FT REGION 164..217
FT /note="Beta-ketoacyl synthase"
FT REGION 650..683
FT /note="Acyl/malonyl transferases"
FT REGION 1202..1221
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT ACT_SITE 183
FT /note="For beta-ketoacyl synthase activity"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10022"
FT ACT_SITE 660
FT /note="For acyl/malonyl transferase activity"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10022"
FT MOD_RES 2622
FT /note="O-(pantetheine 4'-phosphoryl)serine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
SQ SEQUENCE 2684 AA; 304919 MW; B7EDCA3ECD4DB94D CRC64;
MFGYNSNEED CGDVAIIGIG LRFSSGDLNE SISKPNQLFN SLLDGFNGIV NTSERWSDNY
YLNGEINSVS AGLLPLDEWK RFDPIFFGIN PSYDNVVTID PQQRLLLKCV WEALEDSGID
PISLRGTNTS TFIGCSTTDY CSLQKSPFET QNNIFGSSNH SVANRIGYCF DFRGENFTID
SACSSSLNAI NCGYNSIKSN KSNVSVVGGV NFILDPNISK SFTQLNILSP TGKCHSFSSD
ADGYVRSEGV GIVILKKLKD AIKDSNNIYC VIKGSSSNID GNYDKLNFYS PSKSSQYENM
KLAIKSTNGQ INESDIDYCE AHGTGTPTGD PIELEGISRL FSHNNNNNNN NKQVLVGSIK
SNIGHTEACS GVASLIKCCL MFKNKLFLQN INFKEPNPLI NFKEWALKVV TEPIKFNENK
TTVMLINNFG VTGSNVCLIL SEFKEKRYNN NEYSSDNACE QIDIDSKVIE KKKFLIPLSS
NSSTSLDNYK SIIVNNNYDD SNSSTRSFQE FVYNQIKFKS TSLIQKSVII ASDWNEFQDD
DNQIKLKNSE GLISNITVEK KKSPLTVMVF CGQSSQYNKM ALSLYENEPI FKESVNRFDK
ELFKYYGYSV LDRLRSVSDK DEISIHLPIL AQPANIMIQI SLYELYKHWG VSADIIVGHS
LGEMSSSYSS GMIDFETLCY LIYHRSLAQN RTTGTGRMLS VNISYDEFIE KYQSKNNKYE
TLEIACYNSP TSIVIAGKED LLNEISKEFK SNDIFCAMLG SLSSFHTSSQ FMIKDEVCSL
VFKSKLPSVP VFSTVTTNLF NDQTPYNANY VWENIYQPVS FTQTISNLYK HIESNDMGNE
ITFIEVAPHP TLQFYLNQMK SIQSSYFNHG KSVTIYSPLH KKKNDYNEFL KTISLLYVNN
NFNINFKSQL TNINNNKIKS NSNSNSNKNN NKIIQFNDNN LPLYQWDDNE YFKLNPFHEK
ITSEGPPIQN LGNSIDSACS TYQTFIDIKK PPFQWLKGHQ VSDKFYYPGM GYVQNLLSIY
PNQDITISSL EFKSPLVLTE GNNQCLETTV SLLSKNEFNV KSHYKDQKTN QWILSSLGNF
SLFKHNSINS EKLINIQALK DKCNFTTISK QEFYETIKIK TNLTYKGLFQ GVKECSIGNN
CSLAVVSLNE INNHTISNHS TIGRSLFNAA TLDSCLHGSL IVVAQPIVLD RIEGFKLYSS
NIPSSSSSSK DDNDCDSNNN NNSNNFIKEL YVYTEAKAKT NYQSFSASVK IILPNGRLLM
EISMVVCTSV SLVNPRSSII CKPPSNEIYT PWLQPKDSII NKPQQFKHLY SVDEFIAKEE
DNQIISTELL LSLFYKHINV RCPTINLESL ITLEYNQFKQ LYYNNNGSVN ENLFKFVFEI
LKSYSSNNIL NHNNSENNNN ENSNNESLYY FEQLYIKTTK IIAKQLFPLK DDDSFTDTPQ
SLFKNVYLDE FYKNFRAVQP LNNLLSEIII EALKPILNQP IVFRILEAGG GTGSLSLLIL
EKICKLLNAN PNSVIDIEFT WSDVSSSFFT EIKEKFSPFT AHKNFNIIHR VLDLEKPLFD
QDLKPSYYDL VVISNVMHVV KKLKPTLDEI HNILTPNGQL LFIEPPYKSI YYDSIMGCFS
QWWPSPDSDT ELRPDRSCMN QEKWIKLLNE TNYRDTIISG NDNLIFLIQT RKPSINEIIS
KQSSDSSLDQ FNSFNKIILF GNNNNNGCSL QNSISSNQEL KSKIININNF NEFQTWITNN
YDNSDGFGNS KTLIIFLKSI EPINISNFKE ITYEYIQINQ LILKLELTNN FKHLLLSLDS
TTDNYLSSSI IGAARYFVEY PQLDLYILNY DRISLKILNN SSGSSSSSSS SSSSSISGSS
GSSYNSSNVS ISSCKQQQLS LINYLINANN NIQKEFTINN NKVYYERYTR HSNKIKCNLQ
SKSFETNKDN LLIQLDSNLE YQLYSKRVEI NSKEVEIEIK ATGINYKDYL MHIGMVSSDL
DLKYGKEYEV ENGIGIENPM IGIDFSGIIT RLGSDAERNK FKVGDHVCGV ASKTSGSHVV
IDYNFIYHQP LNYNHSISAS IPSIYITSLH SIYGVGNLKS NESILIHSAA SGIGISSLDL
LKCKKHQGHI FLTVGSKDKE DYLIKNYGSF ITAIYSSRNK DYVNEIKNKL IELGEVEQQG
VDLILNTLSS EFMDSNFQCL NMSGRIVDLS VTHLTPNDYI VNNLFKYNMG YNNVEMLYFN
GKMVRSYLKK IIKMINSNKL ELSIPIIEYS NNQFKDAIEY VNQGKHIGKI IVNHNQDEFN
RVYNNYQQNN NNNQIIMKHS YDISKLNMGK NILLTGQTGI ILEIMKYLIR YSNHSIQNMI
ILSKSKLKWE LELLINQTKF IKDNIIKFHF IQIDIEDSNK VNQVLNQLEL NENITNIDSI
IHFAFNNDIG DVQDVNMNRL NIAHGAKTIG AINLHNESIN RSWKIKQFII ASSVASVLGS
DQQCCYISAC SVIDSLSKYR HSLGLPSLAI NLGTIASTGF ISRNNAIETM FKSSFLNLFS
PQLVISSLDL FIQNQHQYPN YSLIDFNFEV MLTSPNYHLY KFDYEINIFK KSYQINTNFS
SGSGSDNEFI HSTILNKISE LLSIDESKVN EDLQLTQYGM DSLVIVQLKN FIDNQLGHNL
ITIHQLQHNK INQSIDIIKF GYLINKNKFK YKNNNINSPS EENF