PKS3_RUBID
ID PKS3_RUBID Reviewed; 391 AA.
AC Q9AU09;
DT 13-NOV-2013, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2001, sequence version 1.
DT 03-AUG-2022, entry version 79.
DE RecName: Full=Polyketide synthase 3;
DE Short=RiPKS3;
DE EC=2.3.1.74;
DE AltName: Full=Naringenin-chalcone synthase PKS3;
GN Name=PKS3;
OS Rubus idaeus (Raspberry).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis;
OC Rubus.
OX NCBI_TaxID=32247;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], FUNCTION, AND CATALYTIC ACTIVITY.
RC STRAIN=cv. Royalty;
RX PubMed=11437245; DOI=10.1023/a:1010642517738;
RA Zheng D., Schroder G., Schroder J., Hrazdina G.;
RT "Molecular and biochemical characterization of three aromatic polyketide
RT synthase genes from Rubus idaeus.";
RL Plant Mol. Biol. 46:1-15(2001).
CC -!- FUNCTION: Polyketide synthase producing p-coumaryltriacetic acid
CC lactone (CTAL) and slightly naringenin chalcone. Can use p-coumaryl-CoA
CC as substrate. {ECO:0000269|PubMed:11437245}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=4-coumaroyl-CoA + 2 H(+) + 3 malonyl-CoA = 2',4,4',6'-
CC tetrahydroxychalcone + 3 CO2 + 4 CoA; Xref=Rhea:RHEA:11128,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:16526, ChEBI:CHEBI:57287,
CC ChEBI:CHEBI:57355, ChEBI:CHEBI:57384, ChEBI:CHEBI:77645; EC=2.3.1.74;
CC Evidence={ECO:0000255|PROSITE-ProRule:PRU10023,
CC ECO:0000269|PubMed:11437245};
CC -!- PATHWAY: Secondary metabolite biosynthesis; flavonoid biosynthesis.
CC -!- SUBUNIT: Homodimer. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the thiolase-like superfamily. Chalcone/stilbene
CC synthases family. {ECO:0000305}.
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DR EMBL; AF292369; AAK15176.1; -; Genomic_DNA.
DR AlphaFoldDB; Q9AU09; -.
DR SMR; Q9AU09; -.
DR BioCyc; MetaCyc:MON-15028; -.
DR UniPathway; UPA00154; -.
DR GO; GO:0102128; F:chalcone synthase activity; IEA:UniProtKB-EC.
DR GO; GO:0016210; F:naringenin-chalcone synthase activity; IEA:UniProtKB-EC.
DR GO; GO:0042803; F:protein homodimerization activity; ISS:UniProtKB.
DR GO; GO:0009813; P:flavonoid biosynthetic process; IEA:UniProtKB-UniPathway.
DR Gene3D; 3.40.47.10; -; 2.
DR InterPro; IPR012328; Chalcone/stilbene_synt_C.
DR InterPro; IPR001099; Chalcone/stilbene_synt_N.
DR InterPro; IPR018088; Chalcone/stilbene_synthase_AS.
DR InterPro; IPR011141; Polyketide_synthase_type-III.
DR InterPro; IPR016039; Thiolase-like.
DR PANTHER; PTHR11877; PTHR11877; 1.
DR Pfam; PF02797; Chal_sti_synt_C; 1.
DR Pfam; PF00195; Chal_sti_synt_N; 1.
DR PIRSF; PIRSF000451; PKS_III; 1.
DR SUPFAM; SSF53901; SSF53901; 2.
DR PROSITE; PS00441; CHALCONE_SYNTH; 1.
PE 1: Evidence at protein level;
KW Acyltransferase; Transferase.
FT CHAIN 1..391
FT /note="Polyketide synthase 3"
FT /id="PRO_0000424288"
FT ACT_SITE 164
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10023"
SQ SEQUENCE 391 AA; 42822 MW; 12509CE11AC31559 CRC64;
MVTVDEVRKA QRAEGPATIL AIGTATPPNC VDQSTYPDYY FRITKSEHRT ELKEKFQRMC
DKSRIKKRYM YLTEEILKEN PSMCEYMAPS LDARQDMVVV EIPKLGKEAA TKAIKEWGQL
KSKITHLVFC TTSGVDMPGA DYQLTKLLGL RPSVKRLMMY QQGCFAGGTV LRLAKDLAEN
NKGARVLAVC SEITAVTFRG PSDTHLDSLV GQALFGDGAA AIIVGSDPLP DIERPLFELV
SAAQTILPDS DGAIDGHLRE VGLTFHLLKD VPGLISKNIE KSLNEAFKPL DITDWNSLFW
IAHPGGPAIL DQVEAKLGLK PEKLEATRNI LSEYGNMSSA CVLFILDEVR RKSVANGHKT
TGEGLEWGVL FGFGPGLTVE TVVLHSVAAS T