PKS7_DICDI
ID PKS7_DICDI Reviewed; 2513 AA.
AC B0G100; Q86AE6;
DT 16-JUN-2009, integrated into UniProtKB/Swiss-Prot.
DT 18-MAR-2008, sequence version 1.
DT 03-AUG-2022, entry version 85.
DE RecName: Full=Probable polyketide synthase 7;
DE Short=dipks7;
DE EC=2.3.1.-;
GN Name=pks7; ORFNames=DDB_G0271614;
OS Dictyostelium discoideum (Slime mold).
OC Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales;
OC Dictyosteliaceae; Dictyostelium.
OX NCBI_TaxID=44689;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AX4;
RX PubMed=12097910; DOI=10.1038/nature00847;
RA Gloeckner G., Eichinger L., Szafranski K., Pachebat J.A., Bankier A.T.,
RA Dear P.H., Lehmann R., Baumgart C., Parra G., Abril J.F., Guigo R.,
RA Kumpf K., Tunggal B., Cox E.C., Quail M.A., Platzer M., Rosenthal A.,
RA Noegel A.A.;
RT "Sequence and analysis of chromosome 2 of Dictyostelium discoideum.";
RL Nature 418:79-85(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AX4;
RX PubMed=15875012; DOI=10.1038/nature03481;
RA Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R.,
RA Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B.,
RA Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T.,
RA Lehmann R., Hamlin N., Davies R., Gaudet P., Fey P., Pilcher K., Chen G.,
RA Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N.,
RA Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E.,
RA Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N.,
RA Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D.,
RA Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T.,
RA Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D.,
RA Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A.,
RA Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M.,
RA Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A.,
RA Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y.,
RA Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C.,
RA Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R.,
RA Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.;
RT "The genome of the social amoeba Dictyostelium discoideum.";
RL Nature 435:43-57(2005).
RN [3]
RP IDENTIFICATION.
RX PubMed=17660200; DOI=10.1093/bioinformatics/btm381;
RA Zucko J., Skunca N., Curk T., Zupan B., Long P.F., Cullum J., Kessin R.H.,
RA Hranueli D.;
RT "Polyketide synthase genes and the natural products potential of
RT Dictyostelium discoideum.";
RL Bioinformatics 23:2543-2549(2007).
CC -!- FUNCTION: Probable polyketide synthase. {ECO:0000250}.
CC -!- COFACTOR:
CC Name=pantetheine 4'-phosphate; Xref=ChEBI:CHEBI:47942;
CC Evidence={ECO:0000250};
CC Note=Binds 1 phosphopantetheine covalently. {ECO:0000250};
CC -!- DOMAIN: Modular protein that is responsible for the completion of one
CC condensation-processing cycle. The beta-ketoacyl synthase region is
CC responsible for the actual condensation reaction while the acyl/malonyl
CC transferase region is responsible for incorporating carboxylic acids
CC units onto an acyl carrier protein (ACP) domain (By similarity).
CC {ECO:0000250}.
CC -!- MISCELLANEOUS: Encoded by one of the numerous copies of polyketide
CC synthase genes and clustered as a quintuplet pks5/pks6/pks7/pks8/pks9
CC in chromosome 2.
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DR EMBL; AAFI02000006; EDR41105.1; -; Genomic_DNA.
DR RefSeq; XP_001732963.1; XM_001732911.1.
DR AlphaFoldDB; B0G100; -.
DR SMR; B0G100; -.
DR PaxDb; B0G100; -.
DR EnsemblProtists; EDR41105; EDR41105; DDB_G0271614.
DR GeneID; 8618017; -.
DR KEGG; ddi:DDB_G0271614; -.
DR dictyBase; DDB_G0271614; pks7.
DR eggNOG; KOG1202; Eukaryota.
DR HOGENOM; CLU_000022_31_0_1; -.
DR InParanoid; B0G100; -.
DR PhylomeDB; B0G100; -.
DR PRO; PR:B0G100; -.
DR Proteomes; UP000002195; Chromosome 2.
DR GO; GO:0004315; F:3-oxoacyl-[acyl-carrier-protein] synthase activity; IEA:InterPro.
DR GO; GO:0016491; F:oxidoreductase activity; IEA:InterPro.
DR GO; GO:0006633; P:fatty acid biosynthetic process; IEA:InterPro.
DR Gene3D; 1.10.1200.10; -; 1.
DR Gene3D; 3.10.129.110; -; 1.
DR Gene3D; 3.40.366.10; -; 1.
DR Gene3D; 3.40.47.10; -; 1.
DR Gene3D; 3.40.50.150; -; 1.
DR InterPro; IPR001227; Ac_transferase_dom_sf.
DR InterPro; IPR036736; ACP-like_sf.
DR InterPro; IPR014043; Acyl_transferase.
DR InterPro; IPR016035; Acyl_Trfase/lysoPLipase.
DR InterPro; IPR013154; ADH_N.
DR InterPro; IPR011032; GroES-like_sf.
DR InterPro; IPR018201; Ketoacyl_synth_AS.
DR InterPro; IPR014031; Ketoacyl_synth_C.
DR InterPro; IPR014030; Ketoacyl_synth_N.
DR InterPro; IPR016036; Malonyl_transacylase_ACP-bd.
DR InterPro; IPR013217; Methyltransf_12.
DR InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR InterPro; IPR032821; PKS_assoc.
DR InterPro; IPR020841; PKS_Beta-ketoAc_synthase_dom.
DR InterPro; IPR020807; PKS_dehydratase.
DR InterPro; IPR042104; PKS_dehydratase_sf.
DR InterPro; IPR020843; PKS_ER.
DR InterPro; IPR013968; PKS_KR.
DR InterPro; IPR009081; PP-bd_ACP.
DR InterPro; IPR029063; SAM-dependent_MTases_sf.
DR InterPro; IPR016039; Thiolase-like.
DR Pfam; PF00698; Acyl_transf_1; 1.
DR Pfam; PF08240; ADH_N; 1.
DR Pfam; PF16197; KAsynt_C_assoc; 1.
DR Pfam; PF00109; ketoacyl-synt; 1.
DR Pfam; PF02801; Ketoacyl-synt_C; 1.
DR Pfam; PF08659; KR; 1.
DR Pfam; PF08242; Methyltransf_12; 1.
DR Pfam; PF14765; PS-DH; 1.
DR SMART; SM00827; PKS_AT; 1.
DR SMART; SM00829; PKS_ER; 1.
DR SMART; SM00825; PKS_KS; 1.
DR SUPFAM; SSF47336; SSF47336; 1.
DR SUPFAM; SSF50129; SSF50129; 1.
DR SUPFAM; SSF51735; SSF51735; 2.
DR SUPFAM; SSF52151; SSF52151; 1.
DR SUPFAM; SSF53335; SSF53335; 1.
DR SUPFAM; SSF53901; SSF53901; 1.
DR SUPFAM; SSF55048; SSF55048; 1.
DR PROSITE; PS00606; B_KETOACYL_SYNTHASE; 1.
DR PROSITE; PS50075; CARRIER; 1.
PE 3: Inferred from homology;
KW Phosphopantetheine; Phosphoprotein; Reference proteome; Transferase.
FT CHAIN 1..2513
FT /note="Probable polyketide synthase 7"
FT /id="PRO_0000376882"
FT DOMAIN 2426..2503
FT /note="Carrier"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
FT REGION 162..215
FT /note="Beta-ketoacyl synthase"
FT REGION 632..665
FT /note="Acyl/malonyl transferase"
FT ACT_SITE 181
FT /note="For beta-ketoacyl synthase activity"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10022"
FT ACT_SITE 642
FT /note="For acyl/malonyl transferase activity"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10022"
FT MOD_RES 2463
FT /note="O-(pantetheine 4'-phosphoryl)serine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
SQ SEQUENCE 2513 AA; 285227 MW; AA7C4930BB9B5205 CRC64;
MNNFKNINLI EKGVAIVGIG FRIPSGNNEN SISSPDDLFN NLKNGFDGVS STSERWSDNF
HKLGEISSPN AGLLPFNECK SFDPLFFGIN PSEAPLIDPQ QRLLLKCTWE ALEDASIDPI
SIRGTNTSVF IGSSNIDYLH TNKHQDSVLK NVIAQSTCAI SNRISYCFDF NGPSLSIDTA
CSSSLNAISQ GYHSILNGTS DISIVGGVNL ILDVETTKAY SYLSMLSKTH GKCKAFDESG
DGFTRGECAG VVVLKNLQDA VKDGNRIYCV INGSSSNVDG NGNMDKVNFY SPSKQSQFNN
INSAFKSTNE KLSVNEIQYI EAHGTGTKTG DPIETEAISM AFKNRDKSTP ILIGSIKSNI
GHCEAGSGVA SLIKCCLMFK YQCFLPNIHF KNPNPLIKFN EWNLKVVTSP IPFNRKNEKP
VSMMINNFGV TGSNCCLLIS EFKKQDYEPY ENNYKSNNKN ILIPFSANSS NSLNQYQSKF
KNIINNQFNF IDFTANQIYS KSNYLCQRSV IAASNSNELF EKILNKKQIQ TKNSIISNMS
FKGKNPITIF VFSGQGSQYP KMALELYNNE VIFKKSIDLI NSKLSKYYGY SVLEKLRSIG
DDDTTSIHDP NISQPAVCMI SVSLFELYCH WGVNPSFILG HSLGEISASY CSGMIDLDTF
CYTVYHRSIA QTKTHGNGRM LSINISDEEF KSMYSQKYPQ IEIACYNSPQ SIVVAGNESI
LNEISKELKE KEIFTAMLGS LSSFHTSSQQ CTKDSVLKLN IQSNQPKVPI FSTVTTNLFN
ESNRFNSQYV YDNIINPVRF TQTISNIYKH IESNQLNNDI VFIEIAPHPT LSFYIKQMVP
SSLNESVSVY SALHKKKNDV EEFQQTISNL YCQNGYNINF KCQFNNKKSN KKIDLPLYQW
SDETYFAQTQ TLEQHREEGP PIDHLGISNS FISPFNNSYK TLIDINNKPF QYLKGHMVKG
KYYFPGCGYI DNIIQLYKNQ DIFISFIEFK TPLILIEGIN QCLQTNIQQT GKSEYRAQFH
FKDQKSNQWT QSSNSNFQLL DHGNDIPSNY NIEEIIKNKC NLSKLTKNEL YTHIKSKTGL
NYTGVFKGVT ECYIGDNCSL SVVSLESQTN SFLNIPILDT CLHGMLVLIN DQCQIVFDKT
IGFKYYSSNI PAYFKENKDC FYVYSHLKSK SADSYHGSII VMLSDGSVLY EIQEVVCKSL
IPIKDSLKIE YPNDELYKVH LQSKDSQIPT PSYFKSIIYE NDSFHSIVNI PEDLFKYIST
LFYKDIIKRC PEININKINS HSVNEIISSF SKISKHERLF RFVFETIKEN GILNSLEEND
DAYFEFNELV IKSSRIISKL LFPLENDNDN EDLPQSLFQN GLMDKFYKCN NFKKKNQIIS
HVIKHSIKEI INNNIIIRIL EFGGGTASLS VEVIGEIVTL LQENPNYQVE IEYTWSDISP
AFIADAKNKI NKIINDAAIT NGLNVIYLPL TIGESLIETQ SIKPSYYDFV IMSNVLHVVK
DIKQVVEQMY QLLTPNGQLV FVEPPYKSIL IDSIVGSFDQ WWSFTDTDIR KDRCGMSQQS
WYQLLKTCNF KDIVMSKECI FGSVIQAQKP PISLLNSQPK HDNIIIYGGG NNSRFFENIK
LYSNSKSLIQ IETIQEFNQF INKSTITNDS IIYFIKTLET LSLDNFAQIT LEYIEINKKL
LQINSLCKHV LIVSDSRKTN YLASSVVGAA RYFDEFQQLK LHTLDFDYDS TQNYINSKNN
KMVQFINILT DSKTNVHKEM IIINNKVYYE IVQKEKNLKL KYNSESFENQ NNLMCSLSPN
LEYQLQSKQI KLRDNQVEVK TIATGINYKD YLNFSGSNSN GDDNTGLPQF GYEFSGIITR
VGNNVKDYKV GDNVFGLSNS CTSSHIVTNF KNIQLKPSKI SHIEASSIPI DYLASFISLF
NVGSLNIEDN ESILIHLGSD GFGLSTFEIL KWKGFKSNLF VTVNSDETKQ YLLDRYGDFI
SGIYSNTDKS YVTEIKNELI KLGSKKKGVD LILNTLPSDF MDSNFELLTK NARIIDLTSN
HLNQSEFLKN INFKYNHSYH NFQLSLFQKN KIQKCLNEIS NAIENGELKT IPIKEFTNLN
IKDAIKYITN GNIEKITVSH DHEIYSDIIY RYLDEKEFSI LKSNYQINSN NLGKNILITG
QSGIILEILK WIIKYSNINT IENVIILSRS SLKWELELLI NQTKLSNNNI KFHFKSIDVG
DSEQVDNAIN EILNENQQIT NIDSIYHFAF QQITCKVQEI NMKHLDISHG AKSMGAINLH
NQSIKRNWKL INFVMASSAI SLIGSTDLCT YACANTLLDS FSKYRVSLGL PSACINFGSI
ESTGFVSKNE SVSVFLDGGG FHPTPINQVL GLLDLQIQNS GKFTNSMLSN FKPSKFKNNQ
QISLFLKFDY LMNLKNNSEQ TKKENIGNKN IDELFIEKVS ELFSTDESKI NKNLRLIDYG
ADSLIIVQLK NWIDKEIGIN LITIQQLQNN TINISIKMIL NSLMKNNQCG REI