PLY3_PECCA
ID PLY3_PECCA Reviewed; 374 AA.
AC P0C1C2; O31035; P14006; P29171; Q47470;
DT 16-MAY-2006, integrated into UniProtKB/Swiss-Prot.
DT 16-MAY-2006, sequence version 1.
DT 03-AUG-2022, entry version 60.
DE RecName: Full=Pectate lyase 3;
DE EC=4.2.2.2;
DE AltName: Full=Pectate lyase C;
DE Short=PLC;
DE AltName: Full=Pectate lyase III;
DE Short=PEL III;
DE Flags: Precursor;
GN Name=pel3; Synonyms=pelC, pelCI;
OS Pectobacterium carotovorum (Erwinia carotovora).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Pectobacteriaceae; Pectobacterium.
OX NCBI_TaxID=554;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND PARTIAL PROTEIN SEQUENCE.
RC STRAIN=Er;
RX PubMed=1368679; DOI=10.1271/bbb1961.55.933;
RA Yoshida A., Izuta M., Ito K., Kamio Y., Izaki K.;
RT "Cloning and characterization of the pectate lyase III gene of Erwinia
RT carotovora Er.";
RL Agric. Biol. Chem. 55:933-940(1991).
CC -!- FUNCTION: Involved in maceration and soft-rotting of plant tissue.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Eliminative cleavage of (1->4)-alpha-D-galacturonan to give
CC oligosaccharides with 4-deoxy-alpha-D-galact-4-enuronosyl groups at
CC their non-reducing ends.; EC=4.2.2.2;
CC -!- COFACTOR:
CC Name=Ca(2+); Xref=ChEBI:CHEBI:29108; Evidence={ECO:0000250};
CC Note=Binds 1 Ca(2+) ion per subunit. {ECO:0000250};
CC -!- PATHWAY: Glycan metabolism; pectin degradation; 2-dehydro-3-deoxy-D-
CC gluconate from pectin: step 2/5.
CC -!- SUBCELLULAR LOCATION: Secreted.
CC -!- SIMILARITY: Belongs to the polysaccharide lyase 1 family. PLADES
CC subfamily. {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; D10064; BAA00953.1; -; Genomic_DNA.
DR PIR; JU0462; WZWCP3.
DR AlphaFoldDB; P0C1C2; -.
DR SMR; P0C1C2; -.
DR CAZy; PL1; Polysaccharide Lyase Family 1.
DR UniPathway; UPA00545; UER00824.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0030570; F:pectate lyase activity; IEA:UniProtKB-EC.
DR GO; GO:0045490; P:pectin catabolic process; IEA:UniProtKB-UniPathway.
DR Gene3D; 2.160.20.10; -; 1.
DR InterPro; IPR002022; Pec_lyase.
DR InterPro; IPR012334; Pectin_lyas_fold.
DR InterPro; IPR011050; Pectin_lyase_fold/virulence.
DR InterPro; IPR045032; PEL.
DR PANTHER; PTHR31683; PTHR31683; 1.
DR Pfam; PF00544; Pectate_lyase_4; 1.
DR SMART; SM00656; Amb_all; 1.
DR SUPFAM; SSF51126; SSF51126; 1.
PE 1: Evidence at protein level;
KW Calcium; Direct protein sequencing; Disulfide bond; Lyase; Metal-binding;
KW Secreted; Signal.
FT SIGNAL 1..22
FT CHAIN 23..374
FT /note="Pectate lyase 3"
FT /id="PRO_0000024851"
FT ACT_SITE 239
FT /evidence="ECO:0000255"
FT BINDING 150
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000250"
FT BINDING 152
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000250"
FT BINDING 187
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000250"
FT BINDING 191
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000250"
FT DISULFID 93..176
FT /evidence="ECO:0000250"
FT DISULFID 350..373
FT /evidence="ECO:0000250"
SQ SEQUENCE 374 AA; 40480 MW; 1D12415917AA1B23 CRC64;
MKYLLPSAAA GLLLLAAQPT MAANTGGYAT TDGGDVAGAV KKTARSMQDI IDIIEAAKLD
SNGKKVKGGA YPLVITYNGN EDALIKAAEA NICGQWSKDA RGVEIKEFTK GITIIGTNGS
SANFGIWLTK SSDIVIRNMR FGYMPGGAQD GDAIRIDNTP NVWIDHNEIF AKNFECAGTK
DGDTTFESAI DIKKASTNVT ISYNYIHGIK KVGLSGFSSS DTGRDLTYHH NIYDDVNARL
PLQRGGQVHA YNNLYTGITS SGLNVRQKGI ALIERNWFEN AKNPVTSRYD GSNFGTWELR
NNNVMSPADF AKYNITWDKD SKPYVNAEDW KSTGTFASVP YSYSPVSAQC VKDKLANYAG
VNKNLAVLTA ANCN