PLYA_ASPNG
ID PLYA_ASPNG Reviewed; 323 AA.
AC Q9C2Z0;
DT 15-JUN-2010, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2001, sequence version 1.
DT 03-AUG-2022, entry version 72.
DE RecName: Full=Pectate lyase A;
DE EC=4.2.2.2;
DE Flags: Precursor;
GN Name=plyA;
OS Aspergillus niger.
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus;
OC Aspergillus subgen. Circumdati.
OX NCBI_TaxID=5061;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], GLYCOSYLATION, FUNCTION, COFACTOR, AND
RP BIOPHYSICOCHEMICAL PROPERTIES.
RC STRAIN=ATCC 9029 / NRRL 3 / CBS 120.49 / DSM 2466 / N400 / FGSC 732;
RX PubMed=11112543; DOI=10.1021/bi000693w;
RA Benen J.A., Kester H.C., Parenicova L., Visser J.;
RT "Characterization of Aspergillus niger pectate lyase A.";
RL Biochemistry 39:15563-15569(2000).
CC -!- FUNCTION: Pectinolytic enzyme consist of four classes of enzymes:
CC pectin lyase, polygalacturonase, pectin methylesterase and
CC rhamnogalacturonase. Among pectinolytic enzymes, pectin lyase is the
CC most important in depolymerization of pectin, since it cleaves internal
CC glycosidic bonds of highly methylated pectins. Favors pectate, the
CC anion, over pectin, the methyl ester. {ECO:0000269|PubMed:11112543}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Eliminative cleavage of (1->4)-alpha-D-galacturonan to give
CC oligosaccharides with 4-deoxy-alpha-D-galact-4-enuronosyl groups at
CC their non-reducing ends.; EC=4.2.2.2;
CC -!- COFACTOR:
CC Name=Ca(2+); Xref=ChEBI:CHEBI:29108;
CC Evidence={ECO:0000269|PubMed:11112543};
CC Note=Binds 1 Ca(2+) ion per subunit. {ECO:0000269|PubMed:11112543};
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the polysaccharide lyase 1 family.
CC {ECO:0000305}.
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DR EMBL; AJ276331; CAC33162.1; -; Genomic_DNA.
DR AlphaFoldDB; Q9C2Z0; -.
DR SMR; Q9C2Z0; -.
DR STRING; 5061.CADANGAP00008167; -.
DR CAZy; PL1; Polysaccharide Lyase Family 1.
DR CLAE; PLY1A_ASPNG; -.
DR VEuPathDB; FungiDB:An10g00870; -.
DR VEuPathDB; FungiDB:ASPNIDRAFT2_1090563; -.
DR VEuPathDB; FungiDB:ATCC64974_63830; -.
DR VEuPathDB; FungiDB:M747DRAFT_374887; -.
DR eggNOG; ENOG502S66G; Eukaryota.
DR BioCyc; MetaCyc:MON-20558; -.
DR BRENDA; 4.2.2.2; 518.
DR GO; GO:0005576; C:extracellular region; IDA:UniProtKB.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0030570; F:pectate lyase activity; IDA:UniProtKB.
DR GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR GO; GO:0045490; P:pectin catabolic process; IDA:UniProtKB.
DR Gene3D; 2.160.20.10; -; 1.
DR InterPro; IPR002022; Pec_lyase.
DR InterPro; IPR012334; Pectin_lyas_fold.
DR InterPro; IPR011050; Pectin_lyase_fold/virulence.
DR InterPro; IPR045032; PEL.
DR PANTHER; PTHR31683; PTHR31683; 1.
DR Pfam; PF00544; Pectate_lyase_4; 1.
DR SMART; SM00656; Amb_all; 1.
DR SUPFAM; SSF51126; SSF51126; 1.
PE 1: Evidence at protein level;
KW Calcium; Carbohydrate metabolism; Cell wall biogenesis/degradation;
KW Glycoprotein; Lyase; Metal-binding; Polysaccharide degradation; Secreted;
KW Signal.
FT SIGNAL 1..31
FT CHAIN 32..323
FT /note="Pectate lyase A"
FT /id="PRO_5000066020"
FT ACT_SITE 222
FT /evidence="ECO:0000255"
FT BINDING 136
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000250"
FT BINDING 165
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000250"
FT BINDING 169
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000250"
FT CARBOHYD 95
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 323 AA; 34369 MW; E7F438D307B816F2 CRC64;
MTNFKWIVAA AGLLFGQVLA APTATSTHAK RATVSDAAFG YASLNGGTTG GAGGTTTTVS
SYAAFTSAVS GDDAKVVYVD GTIKQTADQV KIGSNTSIIG KDANAILEGF GVLVKEKENV
IIRNLGVSKV LADNGDAIGV QYSNNVWIDH CDVSSDRDHD KDYYDGLIDI THGSDYVTVS
NTFIHDHWKA SLVGHSDSNE DEDSGHLTVT YANNYWYNVN SRAPSFRFGT GHVYNSYYLD
VSDGINTRDG AQLLVESNQF VDSKKALYST DDGYAVSNDN DFGDSENTAE EGTLTSMPYD
YTLLGSANVK AAVVGTAGQT LTF