PLYX_PECCA
ID PLYX_PECCA Reviewed; 238 AA.
AC P16530;
DT 01-AUG-1990, integrated into UniProtKB/Swiss-Prot.
DT 01-AUG-1990, sequence version 1.
DT 03-AUG-2022, entry version 87.
DE RecName: Full=Putative pectate lyase X;
DE EC=4.2.2.2;
DE Flags: Precursor;
GN Name=PEL X;
OS Pectobacterium carotovorum (Erwinia carotovora).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Pectobacteriaceae; Pectobacterium.
OX NCBI_TaxID=554;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=Er 18;
RA Ito K., Kobayashi R., Nikaido N., Izaki K.;
RT "DNA structure of pectate lyase I gene cloned from Erwinia carotovora.";
RL Agric. Biol. Chem. 52:479-487(1988).
CC -!- FUNCTION: Involved in maceration and soft-rotting of plant tissue.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Eliminative cleavage of (1->4)-alpha-D-galacturonan to give
CC oligosaccharides with 4-deoxy-alpha-D-galact-4-enuronosyl groups at
CC their non-reducing ends.; EC=4.2.2.2;
CC -!- COFACTOR:
CC Name=Ca(2+); Xref=ChEBI:CHEBI:29108; Evidence={ECO:0000250};
CC Note=Binds 1 Ca(2+) ion per subunit. {ECO:0000250};
CC -!- PATHWAY: Glycan metabolism; pectin degradation; 2-dehydro-3-deoxy-D-
CC gluconate from pectin: step 2/5.
CC -!- INDUCTION: By pectin.
CC -!- SIMILARITY: Belongs to the polysaccharide lyase 1 family.
CC {ECO:0000305}.
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DR EMBL; D00218; BAA00156.1; -; Genomic_DNA.
DR AlphaFoldDB; P16530; -.
DR SMR; P16530; -.
DR CAZy; PL1; Polysaccharide Lyase Family 1.
DR UniPathway; UPA00545; UER00824.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0030570; F:pectate lyase activity; IEA:UniProtKB-EC.
DR GO; GO:0045490; P:pectin catabolic process; IEA:UniProtKB-UniPathway.
DR Gene3D; 2.160.20.10; -; 1.
DR InterPro; IPR002022; Pec_lyase.
DR InterPro; IPR012334; Pectin_lyas_fold.
DR InterPro; IPR011050; Pectin_lyase_fold/virulence.
DR Pfam; PF00544; Pectate_lyase_4; 1.
DR SMART; SM00656; Amb_all; 1.
DR SUPFAM; SSF51126; SSF51126; 1.
PE 2: Evidence at transcript level;
KW Calcium; Lyase; Metal-binding; Signal.
FT SIGNAL 1..22
FT /evidence="ECO:0000255"
FT CHAIN 23..238
FT /note="Putative pectate lyase X"
FT /id="PRO_0000024855"
FT BINDING 153
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000250"
FT BINDING 188
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000250"
FT BINDING 192
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000250"
SQ SEQUENCE 238 AA; 26094 MW; 46800EBA1CF41B64 CRC64;
MKYLLPTAAA GLLLLAAQPA MAANTGGYAT TDGGEVSGAV KKTARSMKEI VDIIEAAQVD
SKGKKVKGGA YPLIITYSGN EDSLIKAAEK NICGQWSKDA RGVQIKEFTK GTYYPGHQWL
IRQLRCLDCE TLLTLWYVIC ALAICQAARK HGDAIRIDNS PNVWIDHNEI FAKNFECKGT
PDNDTTFESA VDIKKGSTNV TVSVSVKEVG TLVNLSRLFF PFRIQRYRAF RLPVSCLP