PMDS_STREO
ID PMDS_STREO Reviewed; 295 AA.
AC Q5KSN4;
DT 04-FEB-2015, integrated into UniProtKB/Swiss-Prot.
DT 15-FEB-2005, sequence version 1.
DT 03-AUG-2022, entry version 37.
DE RecName: Full=Ent-pimara-9(11),15-diene synthase {ECO:0000303|PubMed:17148547};
DE Short=PMD synthase {ECO:0000303|PubMed:17148547};
DE EC=4.2.3.31 {ECO:0000269|PubMed:17148547};
OS Streptomyces sp. (strain KO-3988).
OC Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae;
OC Streptomyces.
OX NCBI_TaxID=285219;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=KO-3988;
RX PubMed=15712669; DOI=10.7164/antibiotics.57.739;
RA Kawasaki T., Kuzuyama T., Kuwamori Y., Matsuura N., Itoh N., Furihata K.,
RA Seto H., Dairi T.;
RT "Presence of copalyl diphosphate synthase gene in an actinomycete
RT possessing the mevalonate pathway.";
RL J. Antibiot. 57:739-747(2004).
RN [2]
RP PROBABLE FUNCTION.
RC STRAIN=KO-3988;
RX PubMed=16452404; DOI=10.1128/jb.188.4.1236-1244.2006;
RA Kawasaki T., Hayashi Y., Kuzuyama T., Furihata K., Itoh N., Seto H.,
RA Dairi T.;
RT "Biosynthesis of a natural polyketide-isoprenoid hybrid compound,
RT furaquinocin A: identification and heterologous expression of the gene
RT cluster.";
RL J. Bacteriol. 188:1236-1244(2006).
RN [3]
RP FUNCTION, CATALYTIC ACTIVITY, COFACTOR, BIOPHYSICOCHEMICAL PROPERTIES, AND
RP SUBUNIT.
RC STRAIN=KO-3988;
RX PubMed=17148547; DOI=10.1093/jb/mvm004;
RA Ikeda C., Hayashi Y., Itoh N., Seto H., Dairi T.;
RT "Functional analysis of eubacterial ent-copalyl diphosphate synthase and
RT pimara-9(11),15-diene synthase with unique primary sequences.";
RL J. Biochem. 141:37-45(2007).
CC -!- FUNCTION: Involved in viguiepinol biosynthesis. Catalyzes the
CC conversion of copalyl diphosphate (ent-CDP) into pimara-9(11),15-diene
CC (PMD). {ECO:0000269|PubMed:16452404, ECO:0000269|PubMed:17148547}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ent-copalyl diphosphate = diphosphate + ent-pimara-9(11),15-
CC diene; Xref=Rhea:RHEA:25544, ChEBI:CHEBI:33019, ChEBI:CHEBI:50064,
CC ChEBI:CHEBI:58553; EC=4.2.3.31;
CC Evidence={ECO:0000269|PubMed:17148547};
CC -!- COFACTOR:
CC Name=a divalent metal cation; Xref=ChEBI:CHEBI:60240;
CC Evidence={ECO:0000269|PubMed:17148547};
CC Note=Activity is highest with Mg(2+). Can also use Co(2+), Zn(2+) and
CC Ni(2+). {ECO:0000269|PubMed:17148547};
CC -!- BIOPHYSICOCHEMICAL PROPERTIES:
CC Kinetic parameters:
CC KM=2.6 uM for ent-CDP {ECO:0000269|PubMed:17148547};
CC Note=kcat is 0.0014 sec(-1). {ECO:0000269|PubMed:17148547};
CC pH dependence:
CC Optimum pH is 7.0. {ECO:0000269|PubMed:17148547};
CC Temperature dependence:
CC Optimum temperature is 30 degrees Celsius.
CC {ECO:0000269|PubMed:17148547};
CC -!- PATHWAY: Antibiotic biosynthesis. {ECO:0000305}.
CC -!- SUBUNIT: Monomer. {ECO:0000269|PubMed:17148547}.
CC -!- SIMILARITY: Belongs to the terpene synthase family. {ECO:0000305}.
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DR EMBL; AB183750; BAD86798.1; -; Genomic_DNA.
DR AlphaFoldDB; Q5KSN4; -.
DR SMR; Q5KSN4; -.
DR KEGG; ag:BAD86798; -.
DR BioCyc; MetaCyc:MON-13867; -.
DR GO; GO:0052674; F:ent-pimara-9(11),15-diene synthase activity; IDA:UniProtKB.
DR GO; GO:0017000; P:antibiotic biosynthetic process; IEA:UniProtKB-KW.
DR Gene3D; 1.10.600.10; -; 1.
DR InterPro; IPR008949; Isoprenoid_synthase_dom_sf.
DR SUPFAM; SSF48576; SSF48576; 1.
PE 1: Evidence at protein level;
KW Antibiotic biosynthesis; Lyase.
FT CHAIN 1..295
FT /note="Ent-pimara-9(11),15-diene synthase"
FT /id="PRO_0000431698"
SQ SEQUENCE 295 AA; 32795 MW; F40BF1D7D3F19107 CRC64;
MRARHRVALK VLADLRSWAA EYPQVLEATP IEALAISTAA ISPWRGANEL RLSAPDVRCG
PTPLDDHVEQ NVRSLDELDD LFGRCEAIVR GGDRDDGHPL LASLSGWQSA LERAPHYPKL
AGLWGDRFAE ALRGERYDWT AGLARDRGEG PSDPQEYLTY AASSNAWITH FPRWATSDRD
DLLDGLPVLD NALEAIEVAV RLSNDLATFE RERAEPGQNN ILMYDTSPDW VHDELDRHSR
KAQEQLDPLA TAGFPPAVEL LRLLDWSVTF YSGADFRGWG SDRDLTGPSG LPSDM