PNO1_DANRE
ID PNO1_DANRE Reviewed; 252 AA.
AC Q6VEU3; Q6P0J4; Q6PHK2;
DT 09-JAN-2007, integrated into UniProtKB/Swiss-Prot.
DT 09-JAN-2007, sequence version 2.
DT 03-AUG-2022, entry version 84.
DE RecName: Full=RNA-binding protein PNO1;
GN Name=pno1; ORFNames=zgc:65782;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=15497447; DOI=10.1080/10425170410001702159;
RA Zhou G.-J., Zhang Y., Wang J., Guo J.H., Ni J., Zhong Z.-M., Wang L.-Q.,
RA Dang Y.-J., Dai J.F., Yu L.;
RT "Cloning and characterization of a novel human RNA binding protein gene
RT PNO1.";
RL DNA Seq. 15:219-224(2004).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo;
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (JAN-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Positively regulates dimethylation of two adjacent adenosines
CC in the loop of a conserved hairpin near the 3'-end of 18S rRNA.
CC {ECO:0000250|UniProtKB:Q9NRX1}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000250|UniProtKB:Q9NRX1}.
CC -!- SIMILARITY: Belongs to the PNO1 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAH65596.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; AY341884; AAQ24168.1; -; mRNA.
DR EMBL; BC056522; AAH56522.1; -; mRNA.
DR EMBL; BC065596; AAH65596.1; ALT_INIT; mRNA.
DR RefSeq; NP_956842.2; NM_200548.1.
DR AlphaFoldDB; Q6VEU3; -.
DR SMR; Q6VEU3; -.
DR STRING; 7955.ENSDARP00000004926; -.
DR PaxDb; Q6VEU3; -.
DR GeneID; 393520; -.
DR KEGG; dre:393520; -.
DR CTD; 56902; -.
DR ZFIN; ZDB-GENE-040426-1419; pno1.
DR eggNOG; KOG3273; Eukaryota.
DR InParanoid; Q6VEU3; -.
DR OrthoDB; 1269649at2759; -.
DR PhylomeDB; Q6VEU3; -.
DR Reactome; R-DRE-6791226; Major pathway of rRNA processing in the nucleolus and cytosol.
DR PRO; PR:Q6VEU3; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Unplaced.
DR GO; GO:0005730; C:nucleolus; ISS:UniProtKB.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR Gene3D; 3.30.1370.10; -; 2.
DR InterPro; IPR004087; KH_dom.
DR InterPro; IPR036612; KH_dom_type_1_sf.
DR InterPro; IPR039912; PNO1-like.
DR PANTHER; PTHR12826:SF13; PTHR12826:SF13; 1.
DR SMART; SM00322; KH; 1.
DR SUPFAM; SSF54791; SSF54791; 1.
PE 2: Evidence at transcript level;
KW Nucleus; Reference proteome; RNA-binding.
FT CHAIN 1..252
FT /note="RNA-binding protein PNO1"
FT /id="PRO_0000270544"
FT DOMAIN 168..225
FT /note="KH"
FT REGION 1..72
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..15
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 21..43
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 31
FT /note="K -> R (in Ref. 1; AAQ24168)"
FT /evidence="ECO:0000305"
FT CONFLICT 35
FT /note="C -> R (in Ref. 1; AAQ24168 and 2; AAH56522)"
FT /evidence="ECO:0000305"
FT CONFLICT 242..245
FT /note="RAVA -> PGVG (in Ref. 1; AAQ24168)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 252 AA; 27884 MW; 5D3CA08B70F79310 CRC64;
MESVSDSTAE VSATMDCDGN TEAFEKVKSK KREKCKRAAA EMDTQTEESS SSAPVKRPHF
PALSGDQLGG GVDEMRKVPV PSHRYTPLKE NWLKIFTPIV ENLQLQVRFN LKTRQVEIKT
CKETQDIGAL TRAADFVKAF VLGFQVEDAL ALIRLDELFL ETFDVTDVKP LKGDHLSRAI
GRIAGKGGKT KFTIENVTKT RIVLADTKIH ILGSFQNIKM ARTAICNLIL GSPPSKVYGN
LRAVATRSAE RF