POBR_ACIAD
ID POBR_ACIAD Reviewed; 271 AA.
AC Q43992;
DT 15-JUL-1999, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 03-AUG-2022, entry version 138.
DE RecName: Full=p-hydroxybenzoate hydroxylase transcriptional activator;
GN Name=pobR; OrderedLocusNames=ACIAD1718;
OS Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Moraxellales; Moraxellaceae;
OC Acinetobacter.
OX NCBI_TaxID=62977;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=8331077; DOI=10.1128/jb.175.14.4499-4506.1993;
RA Dimarco A.A., Averhoff B.A., Ornston L.N.;
RT "Identification of the transcriptional activator pobR and characterization
RT of its role in the expression of pobA, the structural gene for p-
RT hydroxybenzoate hydroxylase in Acinetobacter calcoaceticus.";
RL J. Bacteriol. 175:4499-4506(1993).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 33305 / BD413 / ADP1;
RX PubMed=15514110; DOI=10.1093/nar/gkh910;
RA Barbe V., Vallenet D., Fonknechten N., Kreimeyer A., Oztas S., Labarre L.,
RA Cruveiller S., Robert C., Duprat S., Wincker P., Ornston L.N.,
RA Weissenbach J., Marliere P., Cohen G.N., Medigue C.;
RT "Unique features revealed by the genome sequence of Acinetobacter sp. ADP1,
RT a versatile and naturally transformation competent bacterium.";
RL Nucleic Acids Res. 32:5766-5779(2004).
CC -!- FUNCTION: Positive regulator of the pobA gene for p-hydroxybenzoate
CC hydroxylase.
CC -!- INDUCTION: By p-hydroxybenzoate.
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DR EMBL; L05770; AAC37162.1; -; Genomic_DNA.
DR EMBL; CR543861; CAG68560.1; -; Genomic_DNA.
DR PIR; A36893; A36893.
DR RefSeq; WP_004926666.1; NC_005966.1.
DR PDB; 5HPF; X-ray; 2.31 A; A/B/C=96-271.
DR PDB; 5HPI; X-ray; 2.96 A; A/B/C/D=96-271.
DR PDBsum; 5HPF; -.
DR PDBsum; 5HPI; -.
DR AlphaFoldDB; Q43992; -.
DR SMR; Q43992; -.
DR STRING; 62977.ACIAD1718; -.
DR EnsemblBacteria; CAG68560; CAG68560; ACIAD1718.
DR GeneID; 45234105; -.
DR KEGG; aci:ACIAD1718; -.
DR eggNOG; COG1414; Bacteria.
DR HOGENOM; CLU_062618_0_1_6; -.
DR OMA; LDKRDWI; -.
DR OrthoDB; 370329at2; -.
DR BioCyc; ASP62977:ACIAD_RS07920-MON; -.
DR Proteomes; UP000000430; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046278; P:3,4-dihydroxybenzoate metabolic process; IEA:InterPro.
DR GO; GO:0019439; P:aromatic compound catabolic process; IEA:UniProtKB-KW.
DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IEA:InterPro.
DR Gene3D; 1.10.10.10; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR012794; PcaR_PcaU.
DR InterPro; IPR014757; Tscrpt_reg_IclR_C.
DR InterPro; IPR005471; Tscrpt_reg_IclR_N.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR Pfam; PF09339; HTH_IclR; 1.
DR Pfam; PF01614; IclR; 1.
DR SMART; SM00346; HTH_ICLR; 1.
DR SUPFAM; SSF46785; SSF46785; 1.
DR TIGRFAMs; TIGR02431; pcaR_pcaU; 1.
DR PROSITE; PS51077; HTH_ICLR; 1.
DR PROSITE; PS51078; ICLR_ED; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Activator; Aromatic hydrocarbons catabolism; DNA-binding;
KW Reference proteome; Transcription; Transcription regulation.
FT CHAIN 1..271
FT /note="p-hydroxybenzoate hydroxylase transcriptional
FT activator"
FT /id="PRO_0000201766"
FT DOMAIN 23..83
FT /note="HTH iclR-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00393"
FT DOMAIN 98..271
FT /note="IclR-ED"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00394"
FT DNA_BIND 45..64
FT /note="H-T-H motif"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00393"
FT MUTAGEN 61
FT /note="R->H: In ADP249; loss of activity."
FT HELIX 97..113
FT /evidence="ECO:0007829|PDB:5HPF"
FT STRAND 116..123
FT /evidence="ECO:0007829|PDB:5HPF"
FT STRAND 126..132
FT /evidence="ECO:0007829|PDB:5HPF"
FT TURN 136..138
FT /evidence="ECO:0007829|PDB:5HPF"
FT TURN 146..148
FT /evidence="ECO:0007829|PDB:5HPI"
FT HELIX 156..158
FT /evidence="ECO:0007829|PDB:5HPF"
FT HELIX 160..167
FT /evidence="ECO:0007829|PDB:5HPF"
FT HELIX 171..181
FT /evidence="ECO:0007829|PDB:5HPF"
FT HELIX 194..207
FT /evidence="ECO:0007829|PDB:5HPF"
FT STRAND 210..217
FT /evidence="ECO:0007829|PDB:5HPF"
FT STRAND 220..228
FT /evidence="ECO:0007829|PDB:5HPF"
FT STRAND 234..243
FT /evidence="ECO:0007829|PDB:5HPF"
FT TURN 244..246
FT /evidence="ECO:0007829|PDB:5HPF"
FT HELIX 249..254
FT /evidence="ECO:0007829|PDB:5HPF"
FT HELIX 256..270
FT /evidence="ECO:0007829|PDB:5HPF"
SQ SEQUENCE 271 AA; 30764 MW; 40B7DA8531389084 CRC64;
MEQHHQYLAH PHSSEEIRTE DYIAGLAKGL ALLEAFGIDR QRLNVTQVAE RTGISRTAAR
RYLKTLKFLG YLDTDEHYFW LTHRVLRFSS SYLSSAHLPK VAQSFLNLLC AQTSLTFSIV
VLDEHEVVPV ARSYLPQQDN LRVSPYGMHL GNRLPAHATS TGKVLLSVLD REVQIEWIEK
YGLKRLTPYT ITDEHTFLET LDAVRQSDYC LSTEEHELGL IAIAVPVLNA QGLTIAALNC
MSQTNRVQPQ YLIDQVLPLL RNTANELRNL V