POC1A_XENTR
ID POC1A_XENTR Reviewed; 441 AA.
AC Q28I85;
DT 28-NOV-2012, integrated into UniProtKB/Swiss-Prot.
DT 04-APR-2006, sequence version 1.
DT 03-AUG-2022, entry version 81.
DE RecName: Full=POC1 centriolar protein homolog A;
DE AltName: Full=Pat-interacting protein 2;
DE Short=Pix2;
DE Short=xPix2;
DE AltName: Full=WD repeat-containing protein 51A;
GN Name=poc1a; Synonyms=wdr51a;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Egg;
RG Sanger Xenopus tropicalis EST/cDNA project;
RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Gastrula;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: May play an important role in centriole assembly and/or
CC stability and ciliogenesis. {ECO:0000250}.
CC -!- SUBUNIT: Interacts with pat. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm, cytoskeleton {ECO:0000250}.
CC Note=Colocalizes with mitochondria in cortical germ plasm islands. The
CC mitochondrial localization may be microtubule-dependent (By
CC similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the WD repeat POC1 family. {ECO:0000305}.
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DR EMBL; BC158994; AAI58995.1; -; mRNA.
DR EMBL; CR760535; CAJ83727.1; -; mRNA.
DR RefSeq; NP_001016608.1; NM_001016608.2.
DR AlphaFoldDB; Q28I85; -.
DR SMR; Q28I85; -.
DR STRING; 8364.ENSXETP00000038715; -.
DR GeneID; 549362; -.
DR KEGG; xtr:549362; -.
DR CTD; 25886; -.
DR Xenbase; XB-GENE-5767105; poc1a.
DR InParanoid; Q28I85; -.
DR OrthoDB; 1196215at2759; -.
DR Reactome; R-XTR-8951664; Neddylation.
DR Reactome; R-XTR-983168; Antigen processing: Ubiquitination & Proteasome degradation.
DR Proteomes; UP000008143; Chromosome 4.
DR Proteomes; UP000790000; Unplaced.
DR Bgee; ENSXETG00000010813; Expressed in 2-cell stage embryo and 9 other tissues.
DR GO; GO:0005814; C:centriole; IBA:GO_Central.
DR GO; GO:0036064; C:ciliary basal body; IBA:GO_Central.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0060271; P:cilium assembly; IBA:GO_Central.
DR Gene3D; 2.130.10.10; -; 3.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR001680; WD40_repeat.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR Pfam; PF00400; WD40; 7.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 7.
DR SUPFAM; SSF50978; SSF50978; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 2.
DR PROSITE; PS50082; WD_REPEATS_2; 7.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Cytoplasm; Cytoskeleton; Reference proteome; Repeat;
KW WD repeat.
FT CHAIN 1..441
FT /note="POC1 centriolar protein homolog A"
FT /id="PRO_0000420365"
FT REPEAT 16..55
FT /note="WD 1"
FT REPEAT 58..97
FT /note="WD 2"
FT REPEAT 100..139
FT /note="WD 3"
FT REPEAT 142..181
FT /note="WD 4"
FT REPEAT 184..223
FT /note="WD 5"
FT REPEAT 226..265
FT /note="WD 6"
FT REPEAT 268..307
FT /note="WD 7"
FT REGION 323..380
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 400..427
FT /evidence="ECO:0000255"
FT COMPBIAS 330..356
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 358..372
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 441 AA; 49174 MW; C92CAE6B8A9D8742 CRC64;
MAGQPEDPSL ERHFKGHRDT VTTVDFNPNT KQLASGSMDS CLMIWNMKPQ MRAYRFVGHK
DAILSVDFSP SGHLIASASR DKTVRLWVPS VKGESTVFKA HTGTVRSVSF SGDGQSLVTA
SDDKTIKVWT VHRQKFLFSL NQHINWVRCA KFSPDGRLIV SASDDKTIKL WDKTSRECIH
SFCEHGGFVN FVDFHPSGTC IAAAATDNTV KVWDIRMNKL IQHYQVHSGV VNSLSFHPSG
NYLITASNDS TLKVLDLLEG RLLYTLHGHQ GPVTSVKFSR EGEFFASGGS DEQVMVWKTN
FDSASYADLL KYRQHDQFLN GGDYTSGVPA ADRHRPERNA QTDQADDLEP RHIQMSAKDR
SSPLSYTSRS IDQHHPQAED GNLRTVASTL EHIVGQLDIL TRTVGILEQR LSLTEDKLKE
CIDNQQATVS LSHSATKTPS F