POC1B_XENLA
ID POC1B_XENLA Reviewed; 468 AA.
AC Q4V7Z1;
DT 28-NOV-2012, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2005, sequence version 1.
DT 03-AUG-2022, entry version 78.
DE RecName: Full=POC1 centriolar protein homolog B;
DE AltName: Full=Pat-interacting protein 1;
DE Short=Pix1;
DE Short=xPix1;
DE AltName: Full=WD repeat-containing protein 51B;
GN Name=poc1b; Synonyms=wdr51b;
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], INTERACTION WITH PAT, SUBCELLULAR LOCATION,
RP TISSUE SPECIFICITY, AND DEVELOPMENTAL STAGE.
RX PubMed=18068700; DOI=10.1016/j.yexcr.2007.10.019;
RA Hames R.S., Hames R., Prosser S.L., Euteneuer U., Lopes C.A., Moore W.,
RA Woodland H.R., Fry A.M.;
RT "Pix1 and Pix2 are novel WD40 microtubule-associated proteins that
RT colocalize with mitochondria in Xenopus germ plasm and centrosomes in human
RT cells.";
RL Exp. Cell Res. 314:574-589(2008).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Ovary;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (JUN-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Plays an important role in centriole assembly and/or
CC stability and ciliogenesis. Involved in early steps of centriole
CC duplication, as well as in the later steps of centriole length control.
CC {ECO:0000250|UniProtKB:Q8TC44, ECO:0000269|PubMed:18068700}.
CC -!- SUBUNIT: Interacts with pat. {ECO:0000269|PubMed:18068700}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm, cytoskeleton, microtubule organizing
CC center, centrosome, centriole {ECO:0000250|UniProtKB:Q8TC44}.
CC -!- TISSUE SPECIFICITY: Highly expressed in ovary and, at low levels, in
CC testis. {ECO:0000269|PubMed:18068700}.
CC -!- DEVELOPMENTAL STAGE: Expressed in eggs and early stage embryos. Strong
CC expression is maintained until stage 8. {ECO:0000269|PubMed:18068700}.
CC -!- SIMILARITY: Belongs to the WD repeat POC1 family. {ECO:0000305}.
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DR EMBL; BC097649; AAH97649.1; -; mRNA.
DR EMBL; DQ861903; ABI17539.1; -; mRNA.
DR RefSeq; NP_001089468.1; NM_001095999.1.
DR AlphaFoldDB; Q4V7Z1; -.
DR SMR; Q4V7Z1; -.
DR DNASU; 734519; -.
DR GeneID; 734519; -.
DR KEGG; xla:734519; -.
DR CTD; 734519; -.
DR Xenbase; XB-GENE-944936; poc1b.L.
DR OMA; HYKAHEA; -.
DR OrthoDB; 1196215at2759; -.
DR Proteomes; UP000186698; Chromosome 3L.
DR Bgee; 734519; Expressed in egg cell and 19 other tissues.
DR GO; GO:0005814; C:centriole; ISS:UniProtKB.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0030030; P:cell projection organization; IEA:UniProtKB-KW.
DR GO; GO:0007099; P:centriole replication; ISS:UniProtKB.
DR Gene3D; 2.130.10.10; -; 3.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR001680; WD40_repeat.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR Pfam; PF00400; WD40; 7.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 7.
DR SUPFAM; SSF50978; SSF50978; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 3.
DR PROSITE; PS50082; WD_REPEATS_2; 7.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 1: Evidence at protein level;
KW Cilium biogenesis/degradation; Coiled coil; Cytoplasm; Cytoskeleton;
KW Reference proteome; Repeat; WD repeat.
FT CHAIN 1..468
FT /note="POC1 centriolar protein homolog B"
FT /id="PRO_0000420367"
FT REPEAT 16..55
FT /note="WD 1"
FT REPEAT 58..97
FT /note="WD 2"
FT REPEAT 100..139
FT /note="WD 3"
FT REPEAT 142..181
FT /note="WD 4"
FT REPEAT 184..223
FT /note="WD 5"
FT REPEAT 226..265
FT /note="WD 6"
FT REPEAT 268..307
FT /note="WD 7"
FT COILED 420..459
FT /evidence="ECO:0000255"
SQ SEQUENCE 468 AA; 52116 MW; 35C18B528D2E5564 CRC64;
MASALDDPAL QRHFKGHKDA VTCVDFSPDS KQLASSSADA CVMIWNFKPQ SRAYKYPGHK
EAVTCVQFSP SGHLVASSSK DRTVRLWAPN IKGESTVLKA HTAVVRCVNF SSDGQTFITA
SDDKSIKAWN LHRQRFLFSL TQHTNWVRCA RFSPDGRLIA SCSDDKTVRI WDLTNRLCIN
TFVDYKGHSN YVDFNQMGTC VASAGADSTV KVWDIRMNKL LQHYQVHNAG VSSLSFHPSG
NYLLTASSDG TLKILDLLEG RLIYTLHGHQ GPVLSVTFSK SGDQFASGAT DAQVLVWKTN
FDKYSVKEIV KLQQKRTCPE APPHLNDIYP RTPHLHSSSG HSIEINPMCE VADTQTFDPP
IINVGANLPY CRRTKAVHTL NKHVRNDNYP TPPVAFSYTE GQKEHPLVEE QGVLPPSLSN
TLEQIVDQLN VLTQTVSILE HRLTLTEDKL KECLENQQKT SAHASESD