POL2_ARMVN
ID POL2_ARMVN Reviewed; 1110 AA.
AC Q91HK4;
DT 19-JUL-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2001, sequence version 1.
DT 25-MAY-2022, entry version 76.
DE RecName: Full=RNA2 polyprotein;
DE AltName: Full=P2;
DE Contains:
DE RecName: Full=Protein 2A;
DE Short=P2A;
DE Contains:
DE RecName: Full=Movement protein;
DE AltName: Full=2B-MP;
DE Contains:
DE RecName: Full=Coat protein;
DE AltName: Full=2C-CP;
OS Arabis mosaic virus (isolate NW) (ArMV).
OC Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes;
OC Picornavirales; Secoviridae; Comovirinae; Nepovirus.
OX NCBI_TaxID=282063;
OH NCBI_TaxID=29760; Vitis vinifera (Grape).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=11325468; DOI=10.1016/s0168-1702(01)00235-0;
RA Wetzel T., Meunier L., Jaeger U., Reustle G.M., Krczal G.;
RT "Complete nucleotide sequences of the RNAs 2 of German isolates of
RT Grapevine fanleaf and Arabis mosaic nepoviruses.";
RL Virus Res. 75:139-145(2001).
CC -!- FUNCTION: [Protein 2A]: Implicated in RNA2 replication. Could also be
CC required for nematode transmission of the virus (By similarity).
CC {ECO:0000250}.
CC -!- FUNCTION: [Movement protein]: Transports viral genome to neighboring
CC plant cells directly through plasmosdesmata, without any budding. The
CC movement protein allows efficient cell to cell propagation, by
CC bypassing the host cell wall barrier. Acts by forming a tubular
CC structure at the host plasmodesmata, enlarging it enough to allow free
CC passage of virion capsids (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: [Movement protein]: Host cell junction, host
CC plasmodesma {ECO:0000250}. Note=Assembles in tubules that are embedded
CC within modified plasmodesmata. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: [Coat protein]: Virion {ECO:0000305}.
CC -!- PTM: Specific enzymatic cleavages in vivo by the P1 encoded 3C-like
CC protease yield mature proteins. {ECO:0000250}.
CC -!- MISCELLANEOUS: Virions are comprised of 60 copies of the coat protein.
CC -!- SIMILARITY: Belongs to the nepoviruses RNA2 polyprotein family.
CC {ECO:0000305}.
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DR EMBL; AY017339; AAK07728.1; -; Genomic_RNA.
DR RefSeq; YP_053924.1; NC_006056.1.
DR SMR; Q91HK4; -.
DR PRIDE; Q91HK4; -.
DR GeneID; 2943103; -.
DR KEGG; vg:2943103; -.
DR Proteomes; UP000007441; Genome.
DR GO; GO:0044219; C:host cell plasmodesma; IEA:UniProtKB-SubCell.
DR GO; GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR GO; GO:0046740; P:transport of virus in host, cell to cell; IEA:UniProtKB-KW.
DR Gene3D; 2.60.120.20; -; 2.
DR InterPro; IPR005054; Nepo_coat.
DR InterPro; IPR005305; Nepo_coat_C.
DR InterPro; IPR005306; Nepo_coat_N.
DR InterPro; IPR021081; Nepovirus_subgr_A_2A.
DR InterPro; IPR029053; Viral_coat.
DR Pfam; PF12312; NeA_P2; 1.
DR Pfam; PF03391; Nepo_coat; 1.
DR Pfam; PF03688; Nepo_coat_C; 1.
DR Pfam; PF03689; Nepo_coat_N; 1.
PE 3: Inferred from homology;
KW Capsid protein; Host cell junction; Transport; Viral movement protein;
KW Virion.
FT CHAIN 1..259
FT /note="Protein 2A"
FT /evidence="ECO:0000250"
FT /id="PRO_0000037094"
FT CHAIN 260..605
FT /note="Movement protein"
FT /evidence="ECO:0000250"
FT /id="PRO_0000037095"
FT CHAIN 606..1110
FT /note="Coat protein"
FT /evidence="ECO:0000250"
FT /id="PRO_0000037096"
FT REGION 195..215
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 198..215
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1110 AA; 122186 MW; BF0F7E6BF33B621D CRC64;
MAKFYYSDRR LACWAAGKNP HLGGSIESWL AAIKSDSSFR QTVKEDVQVN RLQPTAVRMF
SWKVGSGPID NPEKCNWHYV LTGEVPAQPT EPVKAREVVV PPVKVIPSPP PVPRPYFRPV
GAFAPTRSGF IRATVERLSR KREESRAAAL FAELPLEYPQ GAPLVVPRGF AAMRWTYHAT
WRRWYDASDE RALRVHPGGP ALPPPPPPPP IQKPPSFEER LQAALERQSC ARAFALETSL
GLNMAWLGTA AIPSTSVCCA DGRTTGGQTI AQEADPINHR VTSNTAPGRA QWISERRSAL
RRREQANSLQ SLAAQTDMTF EQARNAYLGA ADMVEQGLPL LPPLRNAYAP RGLWRGPSTR
ANYTLDFRLN GIPTGQNTLE ILYNPVADEE MDEYRDRGMS AVVIDALEIA INPFGMPGNP
TDLTVVATYG HERNMERAFI GSSSTFLGNG LARAIFFPGL QYSQEEPRRE SIIRLYVAST
NATVDADSIL AAISVGTLRQ HIGSLHNRTV ASSVHAAQVQ GTTLRATMMG NAVVVSPEGS
LVTGTPEANV QIGSGSSMRM VGPLAWENVE EPGQTFTIRN RSRSMRVDRN ADVGVALPRM
STTTRGLAGR GSVQVPKDCQ AGRYLKTLDL RDMVSGFSGI QYEKWITAGL VMPDFKVVIR
YPANAFTGIT WVMSFDAYNR ITSSITTTAS PAYTLSVPHW LLHHKNGTTS CDIDYGELCG
HAMWFNATTF ESPKLHFTCL TGNNKELAAD WEFVVELYAE FEAAKTFLGR PNFVYSADAF
NGSFKFLTIP PLEYDLSTTS AYKSVSLLLG QTLIDGTHKV YNYNNTLLSY YLGIGGVVKG
RVHICSPCTY GIVLRVVSEW NGVTNNWNQL FKYPGCYIGE DGNFEIEIRS PYHRTPLRLL
DAQAASAFTS TLNFYAISGP IAPSGETAKM PVVVQIDEIA LPDLSVPSFP NDYFLWVDFS
AFTVDAEEYV IGSRFFDISS TTSTVHLGDN PFAHMIACHG LHHGILDLKL MWDLEGEFGK
SSGGVTITKL CGDKATGMDG ASRVCALQNM GCETELYIGN FAGANPNSAL SLYSRWLAIK
LDKARSMKML RILCKPRGNF EFYGRTCFRV