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POLG_DEN2P
ID   POLG_DEN2P              Reviewed;        3388 AA.
AC   P12823; Q88646; Q88647; Q88648; Q88649; Q88650; Q88651; Q88652; Q88653;
AC   Q88654; Q88655;
DT   01-OCT-1989, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-1989, sequence version 1.
DT   03-AUG-2022, entry version 207.
DE   RecName: Full=Genome polyprotein;
DE   Contains:
DE     RecName: Full=Capsid protein C;
DE     AltName: Full=Core protein;
DE   Contains:
DE     RecName: Full=Protein prM;
DE   Contains:
DE     RecName: Full=Peptide pr;
DE   Contains:
DE     RecName: Full=Small envelope protein M;
DE     AltName: Full=Matrix protein;
DE   Contains:
DE     RecName: Full=Envelope protein E;
DE   Contains:
DE     RecName: Full=Non-structural protein 1;
DE              Short=NS1;
DE   Contains:
DE     RecName: Full=Non-structural protein 2A;
DE              Short=NS2A;
DE   Contains:
DE     RecName: Full=Serine protease subunit NS2B;
DE     AltName: Full=Flavivirin protease NS2B regulatory subunit;
DE     AltName: Full=Non-structural protein 2B;
DE   Contains:
DE     RecName: Full=Serine protease NS3;
DE              EC=3.4.21.91;
DE              EC=3.6.1.15 {ECO:0000250|UniProtKB:Q9Q6P4};
DE              EC=3.6.4.13 {ECO:0000250|UniProtKB:Q9Q6P4};
DE     AltName: Full=Flavivirin protease NS3 catalytic subunit;
DE     AltName: Full=Non-structural protein 3;
DE   Contains:
DE     RecName: Full=Non-structural protein 4A;
DE              Short=NS4A;
DE   Contains:
DE     RecName: Full=Peptide 2k;
DE   Contains:
DE     RecName: Full=Non-structural protein 4B;
DE              Short=NS4B;
DE   Contains:
DE     RecName: Full=RNA-directed RNA polymerase NS5;
DE              EC=2.1.1.56 {ECO:0000255|PROSITE-ProRule:PRU00924};
DE              EC=2.1.1.57 {ECO:0000255|PROSITE-ProRule:PRU00924};
DE              EC=2.7.7.48 {ECO:0000255|PROSITE-ProRule:PRU00539};
DE     AltName: Full=Non-structural protein 5;
OS   Dengue virus type 2 (strain Puerto Rico/PR159-S1/1969) (DENV-2).
OC   Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes;
OC   Amarillovirales; Flaviviridae; Flavivirus.
OX   NCBI_TaxID=11066;
OH   NCBI_TaxID=53540; Aedimorphus.
OH   NCBI_TaxID=53539; Diceromyia.
OH   NCBI_TaxID=9538; Erythrocebus patas (Red guenon) (Cercopithecus patas).
OH   NCBI_TaxID=9606; Homo sapiens (Human).
OH   NCBI_TaxID=53541; Stegomyia.
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX   PubMed=2827375; DOI=10.1016/0042-6822(88)90406-0;
RA   Hahn Y.S., Galler R., Hunkapiller T., Dalrymple J.M., Strauss J.H.,
RA   Strauss E.G.;
RT   "Nucleotide sequence of dengue 2 RNA and comparison of the encoded proteins
RT   with those of other flaviviruses.";
RL   Virology 162:167-180(1988).
RN   [2]
RP   C-TERMINUS (CAPSID PROTEIN C), C-TERMINUS (ENVELOPE PROTEIN E), AND
RP   C-TERMINUS (NON-STRUCTURAL PROTEIN 1).
RC   STRAIN=New-Guinea;
RX   PubMed=2741348; DOI=10.1016/0042-6822(89)90510-2;
RA   Wright P.J., Cauchi M.R., Ng M.L.;
RT   "Definition of the carboxy termini of the three glycoproteins specified by
RT   dengue virus type 2.";
RL   Virology 171:61-67(1989).
RN   [3]
RP   DISULFIDE BOND (NON-STRUCTURAL PROTEIN 1).
RX   PubMed=14981082; DOI=10.1074/jbc.m312907200;
RA   Wallis T.P., Huang C.Y., Nimkar S.B., Young P.R., Gorman J.J.;
RT   "Determination of the disulfide bond arrangement of dengue virus NS1
RT   protein.";
RL   J. Biol. Chem. 279:20729-20741(2004).
RN   [4]
RP   X-RAY CRYSTALLOGRAPHY (2.4 ANGSTROMS) OF 2494-2783 IN COMPLEX WITH
RP   S-ADENOSYL-L-HOMOCYSTEINE, AND CHARACTERIZATION OF METHYLTRANSFERASE
RP   ACTIVITY (RNA-DIRECTED RNA POLYMERASE NS5).
RX   PubMed=12032088; DOI=10.1093/emboj/21.11.2757;
RA   Egloff M.P., Benarroch D., Selisko B., Romette J.L., Canard B.;
RT   "An RNA cap (nucleoside-2'-O-)-methyltransferase in the flavivirus RNA
RT   polymerase NS5: crystal structure and functional characterization.";
RL   EMBO J. 21:2757-2768(2002).
RN   [5]
RP   X-RAY CRYSTALLOGRAPHY (2.4 ANGSTROMS) OF 281-674, AND DISULFIDE BONDS
RP   (ENVELOPE PROTEIN E).
RX   PubMed=12759475; DOI=10.1073/pnas.0832193100;
RA   Modis Y., Ogata S., Clements D., Harrison S.C.;
RT   "A ligand-binding pocket in the dengue virus envelope glycoprotein.";
RL   Proc. Natl. Acad. Sci. U.S.A. 100:6986-6991(2003).
RN   [6]
RP   STRUCTURE BY ELECTRON MICROSCOPY (16 ANGSTROMS) OF IMMATURE PARTICLES
RP   (SMALL ENVELOPE PROTEIN M, AND ENVELOPE PROTEIN E).
RX   PubMed=12773377; DOI=10.1093/emboj/cdg270;
RA   Zhang Y., Corver J., Chipman P.R., Zhang W., Pletnev S.V., Sedlak D.,
RA   Baker T.S., Strauss J.H., Kuhn R.J., Rossmann M.G.;
RT   "Structures of immature flavivirus particles.";
RL   EMBO J. 22:2604-2613(2003).
CC   -!- FUNCTION: [Capsid protein C]: Plays a role in virus budding by binding
CC       to the cell membrane and gathering the viral RNA into a nucleocapsid
CC       that forms the core of a mature virus particle. During virus entry, may
CC       induce genome penetration into the host cytoplasm after hemifusion
CC       induced by the surface proteins. Can migrate to the cell nucleus where
CC       it modulates host functions. Overcomes the anti-viral effects of host
CC       EXOC1 by sequestering and degrading the latter through the proteasome
CC       degradation pathway. {ECO:0000250|UniProtKB:P17763}.
CC   -!- FUNCTION: [Capsid protein C]: Inhibits RNA silencing by interfering
CC       with host Dicer. {ECO:0000250|UniProtKB:P03314}.
CC   -!- FUNCTION: [Peptide pr]: Prevents premature fusion activity of envelope
CC       proteins in trans-Golgi by binding to envelope protein E at pH6.0.
CC       After virion release in extracellular space, gets dissociated from E
CC       dimers. {ECO:0000250|UniProtKB:P17763}.
CC   -!- FUNCTION: [Protein prM]: Acts as a chaperone for envelope protein E
CC       during intracellular virion assembly by masking and inactivating
CC       envelope protein E fusion peptide. prM is the only viral peptide
CC       matured by host furin in the trans-Golgi network probably to avoid
CC       catastrophic activation of the viral fusion activity in acidic Golgi
CC       compartment prior to virion release. prM-E cleavage is inefficient, and
CC       many virions are only partially matured. These uncleaved prM would play
CC       a role in immune evasion. {ECO:0000250|UniProtKB:P17763}.
CC   -!- FUNCTION: [Small envelope protein M]: May play a role in virus budding.
CC       Exerts cytotoxic effects by activating a mitochondrial apoptotic
CC       pathway through M ectodomain. May display a viroporin activity.
CC       {ECO:0000250|UniProtKB:P17763}.
CC   -!- FUNCTION: [Envelope protein E]: Binds to host cell surface receptor and
CC       mediates fusion between viral and cellular membranes. Envelope protein
CC       is synthesized in the endoplasmic reticulum in the form of heterodimer
CC       with protein prM. They play a role in virion budding in the ER, and the
CC       newly formed immature particle is covered with 60 spikes composed of
CC       heterodimer between precursor prM and envelope protein E. The virion is
CC       transported to the Golgi apparatus where the low pH causes dissociation
CC       of PrM-E heterodimers and formation of E homodimers. prM-E cleavage is
CC       inefficient, and many virions are only partially matured. These
CC       uncleaved prM would play a role in immune evasion.
CC       {ECO:0000250|UniProtKB:P17763}.
CC   -!- FUNCTION: [Non-structural protein 1]: Involved in immune evasion,
CC       pathogenesis and viral replication. Once cleaved off the polyprotein,
CC       is targeted to three destinations: the viral replication cycle, the
CC       plasma membrane and the extracellular compartment. Essential for viral
CC       replication. Required for formation of the replication complex and
CC       recruitment of other non-structural proteins to the ER-derived membrane
CC       structures. Excreted as a hexameric lipoparticle that plays a role
CC       against host immune response. Antagonizing the complement function.
CC       Binds to the host macrophages and dendritic cells. Inhibits signal
CC       transduction originating from Toll-like receptor 3 (TLR3).
CC       {ECO:0000250|UniProtKB:Q9Q6P4}.
CC   -!- FUNCTION: [Non-structural protein 1]: Disrupts the host endothelial
CC       glycocalyx layer of host pulmonary microvascular endothelial cells,
CC       inducing degradation of sialic acid and shedding of heparan sulfate
CC       proteoglycans. NS1 induces expression of sialidases, heparanase, and
CC       activates cathepsin L, which activates heparanase via enzymatic
CC       cleavage. These effects are probably linked to the endothelial
CC       hyperpermeability observed in severe dengue disease.
CC       {ECO:0000250|UniProtKB:P17763}.
CC   -!- FUNCTION: [Non-structural protein 2A]: Component of the viral RNA
CC       replication complex that functions in virion assembly and antagonizes
CC       the host immune response. {ECO:0000250|UniProtKB:P17763}.
CC   -!- FUNCTION: [Serine protease subunit NS2B]: Required cofactor for the
CC       serine protease function of NS3. May have membrane-destabilizing
CC       activity and form viroporins (By similarity).
CC       {ECO:0000250|UniProtKB:P17763, ECO:0000255|PROSITE-ProRule:PRU00859}.
CC   -!- FUNCTION: [Serine protease NS3]: Displays three enzymatic activities:
CC       serine protease, NTPase and RNA helicase. NS3 serine protease, in
CC       association with NS2B, performs its autocleavage and cleaves the
CC       polyprotein at dibasic sites in the cytoplasm: C-prM, NS2A-NS2B, NS2B-
CC       NS3, NS3-NS4A, NS4A-2K and NS4B-NS5. NS3 RNA helicase binds RNA and
CC       unwinds dsRNA in the 3' to 5' direction. {ECO:0000255|PROSITE-
CC       ProRule:PRU00860}.
CC   -!- FUNCTION: [Non-structural protein 4A]: Regulates the ATPase activity of
CC       the NS3 helicase activity. NS4A allows NS3 helicase to conserve energy
CC       during unwinding. Plays a role in the inhibition of the host innate
CC       immune response. Interacts with host MAVS and thereby prevents the
CC       interaction between DDX58 and MAVS. In turn, IFN-beta production is
CC       impaired. Interacts with host AUP1 which mediates induction of
CC       lipophagy in host cells and facilitates production of virus progeny
CC       particles (By similarity). {ECO:0000250|UniProtKB:P17763,
CC       ECO:0000250|UniProtKB:P29991, ECO:0000250|UniProtKB:Q9Q6P4}.
CC   -!- FUNCTION: [Peptide 2k]: Functions as a signal peptide for NS4B and is
CC       required for the interferon antagonism activity of the latter.
CC       {ECO:0000250|UniProtKB:P17763}.
CC   -!- FUNCTION: [Non-structural protein 4B]: Induces the formation of ER-
CC       derived membrane vesicles where the viral replication takes place.
CC       Inhibits interferon (IFN)-induced host STAT1 phosphorylation and
CC       nuclear translocation, thereby preventing the establishment of cellular
CC       antiviral state by blocking the IFN-alpha/beta pathway.
CC       {ECO:0000250|UniProtKB:Q9Q6P4}.
CC   -!- FUNCTION: [RNA-directed RNA polymerase NS5]: Replicates the viral (+)
CC       and (-) RNA genome, and performs the capping of genomes in the
CC       cytoplasm. NS5 methylates viral RNA cap at guanine N-7 and ribose 2'-O
CC       positions. Besides its role in RNA genome replication, also prevents
CC       the establishment of cellular antiviral state by blocking the
CC       interferon-alpha/beta (IFN-alpha/beta) signaling pathway. Inhibits host
CC       TYK2 and STAT2 phosphorylation, thereby preventing activation of JAK-
CC       STAT signaling pathway (By similarity). May reduce immune responses by
CC       preventing the recruitment of the host PAF1 complex to interferon-
CC       responsive genes (By similarity). {ECO:0000250|UniProtKB:P17763,
CC       ECO:0000250|UniProtKB:P29990}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=Selective hydrolysis of -Xaa-Xaa-|-Yaa- bonds in which each of
CC         the Xaa can be either Arg or Lys and Yaa can be either Ser or Ala.;
CC         EC=3.4.21.91;
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC         RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC         COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC         EC=2.7.7.48; Evidence={ECO:0000255|PROSITE-ProRule:PRU00539};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a ribonucleoside 5'-triphosphate + H2O = a ribonucleoside 5'-
CC         diphosphate + H(+) + phosphate; Xref=Rhea:RHEA:23680,
CC         ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:43474,
CC         ChEBI:CHEBI:57930, ChEBI:CHEBI:61557; EC=3.6.1.15;
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC         ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC         ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a 5'-end (5'-triphosphoguanosine)-(ribonucleoside) in mRNA +
CC         S-adenosyl-L-methionine = a 5'-end (N(7)-methyl 5'-
CC         triphosphoguanosine)-ribonucleoside in mRNA + S-adenosyl-L-
CC         homocysteine; Xref=Rhea:RHEA:67008, Rhea:RHEA-COMP:17166, Rhea:RHEA-
CC         COMP:17167, ChEBI:CHEBI:57856, ChEBI:CHEBI:59789, ChEBI:CHEBI:156461,
CC         ChEBI:CHEBI:167617; EC=2.1.1.56; Evidence={ECO:0000255|PROSITE-
CC         ProRule:PRU00924};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a 5'-end (N(7)-methyl 5'-triphosphoguanosine)-ribonucleoside
CC         in mRNA + S-adenosyl-L-methionine = a 5'-end (N(7)-methyl 5'-
CC         triphosphoguanosine)-(2'-O-methyl-ribonucleoside) in mRNA + H(+) + S-
CC         adenosyl-L-homocysteine; Xref=Rhea:RHEA:67020, Rhea:RHEA-COMP:17167,
CC         Rhea:RHEA-COMP:17168, ChEBI:CHEBI:15378, ChEBI:CHEBI:57856,
CC         ChEBI:CHEBI:59789, ChEBI:CHEBI:156461, ChEBI:CHEBI:167609;
CC         EC=2.1.1.57; Evidence={ECO:0000255|PROSITE-ProRule:PRU00924};
CC   -!- SUBUNIT: [Capsid protein C]: Homodimer. Interacts (via N-terminus) with
CC       host EXOC1 (via C-terminus); this interaction results in EXOC1
CC       degradation through the proteasome degradation pathway.
CC       {ECO:0000250|UniProtKB:P17763}.
CC   -!- SUBUNIT: [Protein prM]: Forms heterodimers with envelope protein E in
CC       the endoplasmic reticulum and Golgi. {ECO:0000250|UniProtKB:P17763}.
CC   -!- SUBUNIT: [Envelope protein E]: Homodimer; in the endoplasmic reticulum
CC       and Golgi. Interacts with protein prM. Interacts with non-structural
CC       protein 1. {ECO:0000250|UniProtKB:P17763}.
CC   -!- SUBUNIT: [Non-structural protein 1]: Homodimer; Homohexamer when
CC       secreted. Interacts with envelope protein E.
CC       {ECO:0000250|UniProtKB:P17763}.
CC   -!- SUBUNIT: [Non-structural protein 2A]: Interacts (via N-terminus) with
CC       serine protease NS3. {ECO:0000250|UniProtKB:P17763}.
CC   -!- SUBUNIT: [Serine protease subunit NS2B]: Forms a heterodimer with
CC       serine protease NS3. May form homooligomers.
CC       {ECO:0000250|UniProtKB:P17763}.
CC   -!- SUBUNIT: [Serine protease NS3]: Forms a heterodimer with NS2B.
CC       Interacts with NS4B. Interacts with unphosphorylated RNA-directed RNA
CC       polymerase NS5; this interaction stimulates RNA-directed RNA polymerase
CC       NS5 guanylyltransferase activity. Interacts with host SHFL.
CC       {ECO:0000250|UniProtKB:P17763}.
CC   -!- SUBUNIT: [Non-structural protein 4A]: Interacts with host MAVS; this
CC       interaction inhibits the synthesis of IFN-beta. Interacts with host
CC       SHFL (By similarity). Interacts with host AUP1; the interaction occurs
CC       in the presence of Dengue virus NS4B and induces lipophagy which
CC       facilitates production of virus progeny particles (By similarity). May
CC       interact with host SRPRA and SEC61G (By similarity).
CC       {ECO:0000250|UniProtKB:P17763, ECO:0000250|UniProtKB:P29990,
CC       ECO:0000250|UniProtKB:P29991}.
CC   -!- SUBUNIT: [Non-structural protein 4B]: Interacts with serine protease
CC       NS3. {ECO:0000250|UniProtKB:P17763}.
CC   -!- SUBUNIT: [RNA-directed RNA polymerase NS5]: Homodimer (By similarity).
CC       Interacts with host STAT2; this interaction inhibits the
CC       phosphorylation of the latter, and, when all viral proteins are present
CC       (polyprotein), targets STAT2 for degradation (By similarity). Interacts
CC       with serine protease NS3 (By similarity). Interacts with host PAF1
CC       complex; the interaction may prevent the recruitment of the PAF1
CC       complex to interferon-responsive genes, and thus reduces the immune
CC       response (By similarity). {ECO:0000250|UniProtKB:P17763,
CC       ECO:0000250|UniProtKB:P29990}.
CC   -!- SUBCELLULAR LOCATION: [Capsid protein C]: Virion
CC       {ECO:0000250|UniProtKB:P17763}. Host nucleus
CC       {ECO:0000250|UniProtKB:P17763}. Host cytoplasm
CC       {ECO:0000250|UniProtKB:P17763}. Host cytoplasm, host perinuclear region
CC       {ECO:0000250|UniProtKB:P17763}.
CC   -!- SUBCELLULAR LOCATION: [Peptide pr]: Secreted
CC       {ECO:0000250|UniProtKB:P17763}.
CC   -!- SUBCELLULAR LOCATION: [Small envelope protein M]: Virion membrane
CC       {ECO:0000250|UniProtKB:P17763}; Multi-pass membrane protein
CC       {ECO:0000255}. Host endoplasmic reticulum membrane
CC       {ECO:0000250|UniProtKB:P17763}; Multi-pass membrane protein
CC       {ECO:0000255}.
CC   -!- SUBCELLULAR LOCATION: [Envelope protein E]: Virion membrane
CC       {ECO:0000250|UniProtKB:P17763}; Multi-pass membrane protein
CC       {ECO:0000255}. Host endoplasmic reticulum membrane
CC       {ECO:0000250|UniProtKB:P17763}; Multi-pass membrane protein
CC       {ECO:0000255}.
CC   -!- SUBCELLULAR LOCATION: [Non-structural protein 1]: Secreted
CC       {ECO:0000250|UniProtKB:P17763}. Host endoplasmic reticulum membrane;
CC       Peripheral membrane protein; Lumenal side
CC       {ECO:0000250|UniProtKB:P17763}. Note=Located in RE-derived vesicles
CC       hosting the replication complex. {ECO:0000250|UniProtKB:Q9Q6P4}.
CC   -!- SUBCELLULAR LOCATION: [Non-structural protein 2A]: Host endoplasmic
CC       reticulum membrane {ECO:0000250|UniProtKB:P17763}; Multi-pass membrane
CC       protein {ECO:0000250|UniProtKB:P17763}.
CC   -!- SUBCELLULAR LOCATION: [Serine protease subunit NS2B]: Host endoplasmic
CC       reticulum membrane; Multi-pass membrane protein
CC       {ECO:0000250|UniProtKB:P17763}.
CC   -!- SUBCELLULAR LOCATION: [Serine protease NS3]: Host endoplasmic reticulum
CC       membrane {ECO:0000255|PROSITE-ProRule:PRU00860}; Peripheral membrane
CC       protein {ECO:0000255|PROSITE-ProRule:PRU00860}; Cytoplasmic side
CC       {ECO:0000255|PROSITE-ProRule:PRU00860}. Note=Remains non-covalently
CC       associated to serine protease subunit NS2B. {ECO:0000255|PROSITE-
CC       ProRule:PRU00860}.
CC   -!- SUBCELLULAR LOCATION: [Non-structural protein 4A]: Host endoplasmic
CC       reticulum membrane {ECO:0000250|UniProtKB:P17763}; Multi-pass membrane
CC       protein {ECO:0000250|UniProtKB:P17763}. Host mitochondrion
CC       {ECO:0000250|UniProtKB:P17763}. Note=Located in RE-associated vesicles
CC       hosting the replication complex. Interacts with host MAVS in the
CC       mitochondrion-associated endoplasmic reticulum membranes.
CC       {ECO:0000250|UniProtKB:P17763}.
CC   -!- SUBCELLULAR LOCATION: [Non-structural protein 4B]: Host endoplasmic
CC       reticulum membrane {ECO:0000250|UniProtKB:P17763}; Multi-pass membrane
CC       protein {ECO:0000250|UniProtKB:P17763}. Note=Located in RE-derived
CC       vesicles hosting the replication complex.
CC       {ECO:0000250|UniProtKB:Q9Q6P4}.
CC   -!- SUBCELLULAR LOCATION: [RNA-directed RNA polymerase NS5]: Host
CC       endoplasmic reticulum membrane; Peripheral membrane protein;
CC       Cytoplasmic side. Host nucleus {ECO:0000250|UniProtKB:P17763}.
CC       Note=Located in RE-associated vesicles hosting the replication complex.
CC       NS5 protein is mainly localized in the nucleus rather than in ER
CC       vesicles, especially in the DENV 2, 3, 4 serotypes.
CC       {ECO:0000250|UniProtKB:P17763}.
CC   -!- DOMAIN: The transmembrane domains of the small envelope protein M and
CC       envelope protein E contain an endoplasmic reticulum retention signal.
CC       {ECO:0000250|UniProtKB:P17763}.
CC   -!- PTM: [Genome polyprotein]: Specific enzymatic cleavages in vivo yield
CC       mature proteins. Cleavages in the lumen of endoplasmic reticulum are
CC       performed by host signal peptidase, whereas cleavages in the
CC       cytoplasmic side are performed by serine protease NS3. Signal cleavage
CC       at the 2K-4B site requires a prior NS3 protease-mediated cleavage at
CC       the 4A-2K site. {ECO:0000250|UniProtKB:P17763}.
CC   -!- PTM: [Protein prM]: Cleaved in post-Golgi vesicles by a host furin,
CC       releasing the mature small envelope protein M, and peptide pr. This
CC       cleavage is incomplete as up to 30% of viral particles still carry
CC       uncleaved prM. {ECO:0000250|UniProtKB:P17763}.
CC   -!- PTM: [Envelope protein E]: N-glycosylated.
CC       {ECO:0000250|UniProtKB:P17763}.
CC   -!- PTM: [Non-structural protein 1]: N-glycosylated. The excreted form is
CC       glycosylated and this is required for efficient secretion of the
CC       protein from infected cells. {ECO:0000250|UniProtKB:P17763}.
CC   -!- PTM: [RNA-directed RNA polymerase NS5]: Sumoylation of RNA-directed RNA
CC       polymerase NS5 increases NS5 protein stability allowing proper viral
CC       RNA replication. {ECO:0000250|UniProtKB:P29990}.
CC   -!- PTM: [RNA-directed RNA polymerase NS5]: Phosphorylated on serines
CC       residues. This phosphorylation may trigger NS5 nuclear localization.
CC       {ECO:0000250|UniProtKB:P17763}.
CC   -!- SIMILARITY: In the N-terminal section; belongs to the class I-like SAM-
CC       binding methyltransferase superfamily. mRNA cap 0-1 NS5-type
CC       methyltransferase family. {ECO:0000255|PROSITE-ProRule:PRU00924}.
CC   -!- WEB RESOURCE: Name=Virus Particle ExploreR db; Note=Icosahedral capsid
CC       structure;
CC       URL="https://viperdb.scripps.edu/Info_Page.php?VDB=1p58";
CC   -!- WEB RESOURCE: Name=Virus Pathogen Resource;
CC       URL="https://www.viprbrc.org/brc/home.spg?decorator=flavi_dengue";
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DR   EMBL; M19197; AAA42962.1; -; Genomic_RNA.
DR   PIR; A29972; GNWVDP.
DR   PDB; 1L9K; X-ray; 2.40 A; A=2492-2784.
DR   PDB; 1OAN; X-ray; 2.75 A; A/B=281-674.
DR   PDB; 1OK8; X-ray; 2.00 A; A=281-674.
DR   PDB; 1OKE; X-ray; 2.40 A; A/B=281-674.
DR   PDB; 1P58; EM; 9.50 A; A/B/C=281-775, D/E/F=206-280.
DR   PDB; 1R6A; X-ray; 2.60 A; A=2492-2784.
DR   PDB; 1R6R; NMR; -; A/B=1-100.
DR   PDB; 1THD; EM; 9.50 A; A/B/C=281-675.
DR   PDB; 2P1D; X-ray; 2.90 A; A=2492-2784.
DR   PDB; 2P3L; X-ray; 2.20 A; A=2492-2784.
DR   PDB; 2P3O; X-ray; 2.76 A; A=2492-2784.
DR   PDB; 2P3Q; X-ray; 2.75 A; A=2492-2784.
DR   PDB; 2P40; X-ray; 2.70 A; A=2492-2784.
DR   PDB; 2P41; X-ray; 1.80 A; A=2492-2784.
DR   PDB; 3J8D; EM; 26.00 A; G/H/I=281-674.
DR   PDB; 3ZKO; EM; 13.70 A; A/B/C=281-775.
DR   PDB; 4M9F; X-ray; 2.70 A; A=1394-1440, A=1476-1660.
DR   PDB; 4M9I; X-ray; 2.40 A; A=1394-1440, A=1476-1660.
DR   PDB; 4M9K; X-ray; 1.46 A; A=1394-1440, A=1476-1660.
DR   PDB; 4M9M; X-ray; 1.53 A; A=1394-1440, A=1476-1660.
DR   PDB; 4M9T; X-ray; 1.74 A; A=1394-1440, A=1476-1660.
DR   PDB; 5HHG; X-ray; 2.20 A; C=3353-3388.
DR   PDBsum; 1L9K; -.
DR   PDBsum; 1OAN; -.
DR   PDBsum; 1OK8; -.
DR   PDBsum; 1OKE; -.
DR   PDBsum; 1P58; -.
DR   PDBsum; 1R6A; -.
DR   PDBsum; 1R6R; -.
DR   PDBsum; 1THD; -.
DR   PDBsum; 2P1D; -.
DR   PDBsum; 2P3L; -.
DR   PDBsum; 2P3O; -.
DR   PDBsum; 2P3Q; -.
DR   PDBsum; 2P40; -.
DR   PDBsum; 2P41; -.
DR   PDBsum; 3J8D; -.
DR   PDBsum; 3ZKO; -.
DR   PDBsum; 4M9F; -.
DR   PDBsum; 4M9I; -.
DR   PDBsum; 4M9K; -.
DR   PDBsum; 4M9M; -.
DR   PDBsum; 4M9T; -.
DR   PDBsum; 5HHG; -.
DR   BMRB; P12823; -.
DR   SMR; P12823; -.
DR   BindingDB; P12823; -.
DR   ChEMBL; CHEMBL3308998; -.
DR   DrugBank; DB00811; Ribavirin.
DR   DrugBank; DB01752; S-adenosyl-L-homocysteine.
DR   MEROPS; S07.001; -.
DR   PRIDE; P12823; -.
DR   ABCD; P12823; 9 sequenced antibodies.
DR   BRENDA; 2.1.1.57; 1867.
DR   EvolutionaryTrace; P12823; -.
DR   PRO; PR:P12823; -.
DR   Proteomes; UP000007197; Genome.
DR   GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR   GO; GO:0044167; C:host cell endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0033650; C:host cell mitochondrion; IEA:UniProtKB-SubCell.
DR   GO; GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0044220; C:host cell perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0044385; C:integral to membrane of host cell; IEA:UniProtKB-KW.
DR   GO; GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
DR   GO; GO:0019031; C:viral envelope; IEA:UniProtKB-KW.
DR   GO; GO:0055036; C:virion membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IEA:RHEA.
DR   GO; GO:0003725; F:double-stranded RNA binding; IEA:InterPro.
DR   GO; GO:0005216; F:ion channel activity; IEA:UniProtKB-KW.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0004482; F:mRNA (guanine-N7-)-methyltransferase activity; IEA:UniProtKB-EC.
DR   GO; GO:0004483; F:mRNA (nucleoside-2'-O-)-methyltransferase activity; IEA:UniProtKB-EC.
DR   GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR   GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC.
DR   GO; GO:0003968; F:RNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-KW.
DR   GO; GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
DR   GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR   GO; GO:0075512; P:clathrin-dependent endocytosis of virus by host cell; IEA:UniProtKB-KW.
DR   GO; GO:0039654; P:fusion of virus membrane with host endosome membrane; IEA:UniProtKB-KW.
DR   GO; GO:0039520; P:induction by virus of host autophagy; ISS:UniProtKB.
DR   GO; GO:0039707; P:pore formation by virus in membrane of host cell; IEA:UniProtKB-KW.
DR   GO; GO:0051259; P:protein complex oligomerization; IEA:UniProtKB-KW.
DR   GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR   GO; GO:0039574; P:suppression by virus of host JAK-STAT cascade via inhibition of host TYK2 activity; IEA:UniProtKB-KW.
DR   GO; GO:0039564; P:suppression by virus of host JAK-STAT cascade via inhibition of STAT2 activity; IEA:UniProtKB-KW.
DR   GO; GO:0039502; P:suppression by virus of host type I interferon-mediated signaling pathway; IEA:UniProtKB-KW.
DR   GO; GO:0039545; P:suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of MAVS activity; IEA:UniProtKB-KW.
DR   GO; GO:0039694; P:viral RNA genome replication; IEA:InterPro.
DR   GO; GO:0019062; P:virion attachment to host cell; IEA:UniProtKB-KW.
DR   CDD; cd20761; capping_2-OMTase_Flaviviridae; 1.
DR   CDD; cd12149; Flavi_E_C; 1.
DR   DisProt; DP01245; -.
DR   Gene3D; 1.10.10.930; -; 1.
DR   Gene3D; 1.10.8.970; -; 1.
DR   Gene3D; 1.20.1280.260; -; 1.
DR   Gene3D; 2.40.10.10; -; 1.
DR   Gene3D; 2.60.260.50; -; 1.
DR   Gene3D; 2.60.40.350; -; 1.
DR   Gene3D; 2.60.98.10; -; 1.
DR   Gene3D; 3.30.387.10; -; 1.
DR   Gene3D; 3.30.67.10; -; 1.
DR   Gene3D; 3.40.50.150; -; 1.
DR   Gene3D; 3.40.50.300; -; 2.
DR   InterPro; IPR011492; DEAD_Flavivir.
DR   InterPro; IPR043502; DNA/RNA_pol_sf.
DR   InterPro; IPR000069; Env_glycoprot_M_flavivir.
DR   InterPro; IPR038302; Env_glycoprot_M_sf_flavivir.
DR   InterPro; IPR013755; Flav_gly_cen_dom_subdom1.
DR   InterPro; IPR001122; Flavi_capsidC.
DR   InterPro; IPR037172; Flavi_capsidC_sf.
DR   InterPro; IPR027287; Flavi_E_Ig-like.
DR   InterPro; IPR026470; Flavi_E_Stem/Anchor_dom.
DR   InterPro; IPR038345; Flavi_E_Stem/Anchor_dom_sf.
DR   InterPro; IPR001157; Flavi_NS1.
DR   InterPro; IPR000752; Flavi_NS2A.
DR   InterPro; IPR000487; Flavi_NS2B.
DR   InterPro; IPR000404; Flavi_NS4A.
DR   InterPro; IPR001528; Flavi_NS4B.
DR   InterPro; IPR002535; Flavi_propep.
DR   InterPro; IPR038688; Flavi_propep_sf.
DR   InterPro; IPR000336; Flavivir/Alphavir_Ig-like_sf.
DR   InterPro; IPR001850; Flavivirus_NS3_S7.
DR   InterPro; IPR014412; Gen_Poly_FLV.
DR   InterPro; IPR011998; Glycoprot_cen/dimer.
DR   InterPro; IPR036253; Glycoprot_cen/dimer_sf.
DR   InterPro; IPR038055; Glycoprot_E_dimer_dom.
DR   InterPro; IPR013756; GlyE_cen_dom_subdom2.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR014756; Ig_E-set.
DR   InterPro; IPR026490; mRNA_cap_0/1_MeTrfase.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR009003; Peptidase_S1_PA.
DR   InterPro; IPR043504; Peptidase_S1_PA_chymotrypsin.
DR   InterPro; IPR000208; RNA-dir_pol_flavivirus.
DR   InterPro; IPR007094; RNA-dir_pol_PSvirus.
DR   InterPro; IPR002877; RNA_MeTrfase_FtsJ_dom.
DR   InterPro; IPR029063; SAM-dependent_MTases_sf.
DR   Pfam; PF01003; Flavi_capsid; 1.
DR   Pfam; PF07652; Flavi_DEAD; 1.
DR   Pfam; PF02832; Flavi_glycop_C; 1.
DR   Pfam; PF00869; Flavi_glycoprot; 1.
DR   Pfam; PF01004; Flavi_M; 1.
DR   Pfam; PF00948; Flavi_NS1; 1.
DR   Pfam; PF01005; Flavi_NS2A; 1.
DR   Pfam; PF01002; Flavi_NS2B; 1.
DR   Pfam; PF01350; Flavi_NS4A; 1.
DR   Pfam; PF01349; Flavi_NS4B; 1.
DR   Pfam; PF00972; Flavi_NS5; 1.
DR   Pfam; PF01570; Flavi_propep; 1.
DR   Pfam; PF01728; FtsJ; 1.
DR   Pfam; PF00949; Peptidase_S7; 1.
DR   PIRSF; PIRSF003817; Gen_Poly_FLV; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SUPFAM; SSF101257; SSF101257; 1.
DR   SUPFAM; SSF50494; SSF50494; 1.
DR   SUPFAM; SSF52540; SSF52540; 2.
DR   SUPFAM; SSF53335; SSF53335; 1.
DR   SUPFAM; SSF56672; SSF56672; 1.
DR   SUPFAM; SSF56983; SSF56983; 1.
DR   SUPFAM; SSF81296; SSF81296; 1.
DR   TIGRFAMs; TIGR04240; flavi_E_stem; 1.
DR   PROSITE; PS51527; FLAVIVIRUS_NS2B; 1.
DR   PROSITE; PS51528; FLAVIVIRUS_NS3PRO; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
DR   PROSITE; PS50507; RDRP_SSRNA_POS; 1.
DR   PROSITE; PS51591; RNA_CAP01_NS5_MT; 1.
PE   1: Evidence at protein level;
KW   3D-structure; Activation of host autophagy by virus; ATP-binding;
KW   Capsid protein; Clathrin-mediated endocytosis of virus by host;
KW   Cleavage on pair of basic residues; Disulfide bond;
KW   Fusion of virus membrane with host endosomal membrane;
KW   Fusion of virus membrane with host membrane; Glycoprotein; Helicase;
KW   Host cytoplasm; Host endoplasmic reticulum; Host membrane;
KW   Host mitochondrion; Host nucleus; Host-virus interaction; Hydrolase;
KW   Inhibition of host innate immune response by virus;
KW   Inhibition of host interferon signaling pathway by virus;
KW   Inhibition of host MAVS by virus; Inhibition of host RLR pathway by virus;
KW   Inhibition of host STAT2 by virus; Inhibition of host TYK2 by virus;
KW   Ion channel; Ion transport; Membrane; Metal-binding; Methyltransferase;
KW   mRNA capping; mRNA processing; Multifunctional enzyme; Nucleotide-binding;
KW   Nucleotidyltransferase; Phosphoprotein; Protease; RNA-binding;
KW   RNA-directed RNA polymerase; S-adenosyl-L-methionine; Secreted;
KW   Serine protease; Suppressor of RNA silencing; Transcription;
KW   Transcription regulation; Transferase; Transmembrane; Transmembrane helix;
KW   Transport; Ubl conjugation; Viral attachment to host cell;
KW   Viral envelope protein; Viral immunoevasion; Viral ion channel;
KW   Viral penetration into host cytoplasm; Viral RNA replication; Virion;
KW   Virus endocytosis by host; Virus entry into host cell; Zinc.
FT   CHAIN           1..3388
FT                   /note="Genome polyprotein"
FT                   /id="PRO_0000405217"
FT   CHAIN           1..100
FT                   /note="Capsid protein C"
FT                   /evidence="ECO:0000250|UniProtKB:P29990"
FT                   /id="PRO_0000037969"
FT   PROPEP          101..114
FT                   /note="ER anchor for the capsid protein C, removed in
FT                   mature form by serine protease NS3"
FT                   /evidence="ECO:0000250|UniProtKB:P29990"
FT                   /id="PRO_0000037970"
FT   CHAIN           115..280
FT                   /note="Protein prM"
FT                   /evidence="ECO:0000250|UniProtKB:P29990"
FT                   /id="PRO_0000308286"
FT   CHAIN           115..205
FT                   /note="Peptide pr"
FT                   /evidence="ECO:0000250|UniProtKB:P29990"
FT                   /id="PRO_0000308287"
FT   CHAIN           206..280
FT                   /note="Small envelope protein M"
FT                   /evidence="ECO:0000250|UniProtKB:P29990"
FT                   /id="PRO_0000037971"
FT   CHAIN           281..775
FT                   /note="Envelope protein E"
FT                   /evidence="ECO:0000250|UniProtKB:P29990"
FT                   /id="PRO_0000037972"
FT   CHAIN           776..1127
FT                   /note="Non-structural protein 1"
FT                   /evidence="ECO:0000250|UniProtKB:P29990"
FT                   /id="PRO_0000037973"
FT   CHAIN           1128..1345
FT                   /note="Non-structural protein 2A"
FT                   /evidence="ECO:0000250|UniProtKB:P29990"
FT                   /id="PRO_0000037974"
FT   CHAIN           1346..1475
FT                   /note="Serine protease subunit NS2B"
FT                   /evidence="ECO:0000250|UniProtKB:P29990"
FT                   /id="PRO_0000037975"
FT   CHAIN           1476..2090
FT                   /note="Serine protease NS3"
FT                   /evidence="ECO:0000250|UniProtKB:P29990"
FT                   /id="PRO_0000037976"
FT   CHAIN           2091..2217
FT                   /note="Non-structural protein 4A"
FT                   /evidence="ECO:0000250|UniProtKB:P29990"
FT                   /id="PRO_0000037977"
FT   PEPTIDE         2218..2240
FT                   /note="Peptide 2k"
FT                   /evidence="ECO:0000250|UniProtKB:P29990"
FT                   /id="PRO_0000308289"
FT   CHAIN           2241..2488
FT                   /note="Non-structural protein 4B"
FT                   /evidence="ECO:0000250|UniProtKB:P29990"
FT                   /id="PRO_0000037978"
FT   CHAIN           2489..3388
FT                   /note="RNA-directed RNA polymerase NS5"
FT                   /evidence="ECO:0000250|UniProtKB:P29990"
FT                   /id="PRO_0000037979"
FT   TOPO_DOM        1..101
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        102..122
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        123..238
FT                   /note="Extracellular"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        239..259
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        260..265
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        266..280
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        281..725
FT                   /note="Extracellular"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        726..746
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        747..752
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        753..773
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        774..1195
FT                   /note="Extracellular"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        1196..1220
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        1221..1226
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        1227..1245
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        1246..1269
FT                   /note="Lumenal"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        1270..1290
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        1291
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        1292..1310
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        1311..1317
FT                   /note="Lumenal"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        1318..1338
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        1339..1346
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        1347..1367
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        1368..1370
FT                   /note="Lumenal"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        1371..1391
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        1392..1447
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000255"
FT   INTRAMEM        1448..1468
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        1469..2144
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        2145..2165
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        2166..2167
FT                   /note="Lumenal"
FT                   /evidence="ECO:0000255"
FT   INTRAMEM        2168..2188
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        2189
FT                   /note="Lumenal"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        2190..2210
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        2211..2225
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        2226..2246
FT                   /note="Helical; Note=Signal for NS4B"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        2247..2271
FT                   /note="Lumenal"
FT                   /evidence="ECO:0000255"
FT   INTRAMEM        2272..2292
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        2293..2313
FT                   /note="Lumenal"
FT                   /evidence="ECO:0000255"
FT   INTRAMEM        2314..2334
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        2335..2344
FT                   /note="Lumenal"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        2345..2365
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        2366..2410
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        2411..2431
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        2432..2456
FT                   /note="Lumenal"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        2457..2477
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        2478..3388
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000255"
FT   DOMAIN          1476..1653
FT                   /note="Peptidase S7"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00860"
FT   DOMAIN          1655..1811
FT                   /note="Helicase ATP-binding"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00541"
FT   DOMAIN          1821..1988
FT                   /note="Helicase C-terminal"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00542"
FT   DOMAIN          2490..2752
FT                   /note="mRNA cap 0-1 NS5-type MT"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00924"
FT   DOMAIN          3017..3166
FT                   /note="RdRp catalytic"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00539"
FT   REGION          1..15
FT                   /note="Interaction with host EXOC1"
FT                   /evidence="ECO:0000250|UniProtKB:P17763"
FT   REGION          37..72
FT                   /note="Hydrophobic; homodimerization of capsid protein C"
FT                   /evidence="ECO:0000250|UniProtKB:P29990"
FT   REGION          378..391
FT                   /note="Fusion peptide"
FT                   /evidence="ECO:0000250|UniProtKB:P14336"
FT   REGION          1398..1437
FT                   /note="Interacts with and activates NS3 protease"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00859"
FT   REGION          1659..1662
FT                   /note="Important for RNA-binding"
FT                   /evidence="ECO:0000250|UniProtKB:P14340"
FT   MOTIF           1759..1762
FT                   /note="DEAH box"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00541"
FT   MOTIF           2565..2568
FT                   /note="SUMO-interacting motif"
FT                   /evidence="ECO:0000250|UniProtKB:P29990"
FT   ACT_SITE        1526
FT                   /note="Charge relay system; for serine protease NS3
FT                   activity"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00860"
FT   ACT_SITE        1550
FT                   /note="Charge relay system; for serine protease NS3
FT                   activity"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00860"
FT   ACT_SITE        1610
FT                   /note="Charge relay system; for serine protease NS3
FT                   activity"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00860"
FT   ACT_SITE        2549
FT                   /note="For 2'-O-MTase activity"
FT                   /evidence="ECO:0000250|UniProtKB:Q6YMS4"
FT   ACT_SITE        2634
FT                   /note="For 2'-O-MTase activity"
FT                   /evidence="ECO:0000250|UniProtKB:Q6YMS4"
FT   ACT_SITE        2669
FT                   /note="For 2'-O-MTase activity"
FT                   /evidence="ECO:0000250|UniProtKB:Q6YMS4"
FT   ACT_SITE        2705
FT                   /note="For 2'-O-MTase activity"
FT                   /evidence="ECO:0000250|UniProtKB:Q6YMS4"
FT   BINDING         1668..1675
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00541"
FT   BINDING         2544
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00924"
FT   BINDING         2574
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00924"
FT   BINDING         2575
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00924"
FT   BINDING         2592
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00924"
FT   BINDING         2593
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00924"
FT   BINDING         2619
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00924"
FT   BINDING         2620
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00924"
FT   BINDING         2635
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00924"
FT   BINDING         2707
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00924"
FT   BINDING         2926
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250|UniProtKB:Q6YMS4"
FT   BINDING         2930
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250|UniProtKB:Q6YMS4"
FT   BINDING         2935
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250|UniProtKB:Q6YMS4"
FT   BINDING         2938
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250|UniProtKB:Q6YMS4"
FT   BINDING         3200
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250|UniProtKB:Q6YMS4"
FT   BINDING         3216
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250|UniProtKB:Q6YMS4"
FT   BINDING         3335
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250|UniProtKB:Q6YMS4"
FT   SITE            100..101
FT                   /note="Cleavage; by viral protease NS3"
FT                   /evidence="ECO:0000250|UniProtKB:P29990"
FT   SITE            114..115
FT                   /note="Cleavage; by host signal peptidase"
FT                   /evidence="ECO:0000250|UniProtKB:P29990"
FT   SITE            205..206
FT                   /note="Cleavage; by host furin"
FT                   /evidence="ECO:0000250|UniProtKB:P29990, ECO:0000255"
FT   SITE            280..281
FT                   /note="Cleavage; by host signal peptidase"
FT                   /evidence="ECO:0000250|UniProtKB:P29990"
FT   SITE            775..776
FT                   /note="Cleavage; by host signal peptidase"
FT                   /evidence="ECO:0000250|UniProtKB:P29990"
FT   SITE            1127..1128
FT                   /note="Cleavage; by host"
FT                   /evidence="ECO:0000250|UniProtKB:P29990"
FT   SITE            1345..1346
FT                   /note="Cleavage; by viral protease NS3"
FT                   /evidence="ECO:0000250|UniProtKB:P29990"
FT   SITE            1475..1476
FT                   /note="Cleavage; by autolysis"
FT                   /evidence="ECO:0000250|UniProtKB:P29990"
FT   SITE            1932
FT                   /note="Involved in NS3 ATPase and RTPase activities"
FT                   /evidence="ECO:0000250|UniProtKB:P14335"
FT   SITE            1935
FT                   /note="Involved in NS3 ATPase and RTPase activities"
FT                   /evidence="ECO:0000250|UniProtKB:P14335"
FT   SITE            2090..2091
FT                   /note="Cleavage; by autolysis"
FT                   /evidence="ECO:0000250|UniProtKB:P29990"
FT   SITE            2217..2218
FT                   /note="Cleavage; by viral protease NS3"
FT                   /evidence="ECO:0000250|UniProtKB:P29990"
FT   SITE            2240..2241
FT                   /note="Cleavage; by host signal peptidase"
FT                   /evidence="ECO:0000250|UniProtKB:P29990"
FT   SITE            2488..2489
FT                   /note="Cleavage; by viral protease NS3"
FT                   /evidence="ECO:0000250|UniProtKB:P29990"
FT   SITE            2502
FT                   /note="mRNA cap binding"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00924"
FT   SITE            2505
FT                   /note="mRNA cap binding; via carbonyl oxygen"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00924"
FT   SITE            2506
FT                   /note="mRNA cap binding"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00924"
FT   SITE            2508
FT                   /note="mRNA cap binding; via carbonyl oxygen"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00924"
FT   SITE            2513
FT                   /note="mRNA cap binding"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00924"
FT   SITE            2517
FT                   /note="mRNA cap binding"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00924"
FT   SITE            2549
FT                   /note="Essential for 2'-O-methyltransferase activity"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00924"
FT   SITE            2634
FT                   /note="Essential for 2'-O-methyltransferase and N-7
FT                   methyltransferase activity"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00924"
FT   SITE            2638
FT                   /note="mRNA cap binding"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00924"
FT   SITE            2669
FT                   /note="Essential for 2'-O-methyltransferase activity"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00924"
FT   SITE            2700
FT                   /note="mRNA cap binding"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00924"
FT   SITE            2702
FT                   /note="mRNA cap binding"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00924"
FT   SITE            2705
FT                   /note="Essential for 2'-O-methyltransferase activity"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00924"
FT   MOD_RES         2544
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P03314"
FT   CARBOHYD        183
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT   CARBOHYD        347
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT   CARBOHYD        433
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT   CARBOHYD        905
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT   CARBOHYD        982
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT   CARBOHYD        1134
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT   CARBOHYD        2298
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT   CARBOHYD        2302
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT   CARBOHYD        2454
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT   DISULFID        283..310
FT                   /evidence="ECO:0000269|PubMed:12759475"
FT   DISULFID        340..401
FT                   /evidence="ECO:0000269|PubMed:12759475"
FT   DISULFID        354..385
FT                   /evidence="ECO:0000269|PubMed:12759475"
FT   DISULFID        372..396
FT                   /evidence="ECO:0000269|PubMed:12759475"
FT   DISULFID        465..565
FT                   /evidence="ECO:0000269|PubMed:12759475"
FT   DISULFID        582..613
FT                   /evidence="ECO:0000269|PubMed:12759475"
FT   DISULFID        779..790
FT                   /evidence="ECO:0000269|PubMed:14981082"
FT   DISULFID        830..918
FT                   /evidence="ECO:0000269|PubMed:14981082"
FT   DISULFID        954..998
FT                   /evidence="ECO:0000269|PubMed:14981082"
FT   DISULFID        1055..1104
FT                   /evidence="ECO:0000269|PubMed:14981082"
FT   DISULFID        1066..1088
FT                   /evidence="ECO:0000269|PubMed:14981082"
FT   DISULFID        1087..1091
FT                   /evidence="ECO:0000269|PubMed:14981082"
FT   CONFLICT        351
FT                   /note="D -> E (in Ref. 5)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        615
FT                   /note="T -> I (in Ref. 5)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        632
FT                   /note="T -> I (in Ref. 5)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        670
FT                   /note="D -> N (in Ref. 5)"
FT                   /evidence="ECO:0000305"
FT   STRAND          23..25
FT                   /evidence="ECO:0007829|PDB:1R6R"
FT   HELIX           27..32
FT                   /evidence="ECO:0007829|PDB:1R6R"
FT   STRAND          34..36
FT                   /evidence="ECO:0007829|PDB:1R6R"
FT   HELIX           45..57
FT                   /evidence="ECO:0007829|PDB:1R6R"
FT   HELIX           63..69
FT                   /evidence="ECO:0007829|PDB:1R6R"
FT   HELIX           75..95
FT                   /evidence="ECO:0007829|PDB:1R6R"
FT   TURN            282..285
FT                   /evidence="ECO:0007829|PDB:1OKE"
FT   HELIX           288..290
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   STRAND          291..293
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   STRAND          295..306
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   STRAND          311..315
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   STRAND          320..332
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   STRAND          334..352
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   HELIX           363..366
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   STRAND          370..379
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   HELIX           381..383
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   STRAND          389..409
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   HELIX           412..414
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   STRAND          415..424
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   TURN            428..432
FT                   /evidence="ECO:0007829|PDB:1OKE"
FT   STRAND          440..444
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   STRAND          450..455
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   TURN            456..458
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   STRAND          459..467
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   TURN            473..475
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   STRAND          476..481
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   STRAND          484..489
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   HELIX           490..495
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   STRAND          500..502
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   HELIX           514..516
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   STRAND          518..520
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   STRAND          523..526
FT                   /evidence="ECO:0007829|PDB:1OKE"
FT   STRAND          530..532
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   HELIX           537..543
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   TURN            544..546
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   STRAND          547..550
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   STRAND          552..559
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   STRAND          562..571
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   STRAND          586..594
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   STRAND          600..606
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   STRAND          608..610
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   STRAND          612..614
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   STRAND          617..624
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   STRAND          631..633
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   STRAND          645..649
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   STRAND          653..661
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   STRAND          667..673
FT                   /evidence="ECO:0007829|PDB:1OK8"
FT   STRAND          1396..1402
FT                   /evidence="ECO:0007829|PDB:4M9K"
FT   HELIX           1408..1413
FT                   /evidence="ECO:0007829|PDB:4M9K"
FT   STRAND          1414..1417
FT                   /evidence="ECO:0007829|PDB:4M9K"
FT   HELIX           1427..1429
FT                   /evidence="ECO:0007829|PDB:4M9T"
FT   STRAND          1495..1504
FT                   /evidence="ECO:0007829|PDB:4M9K"
FT   STRAND          1507..1517
FT                   /evidence="ECO:0007829|PDB:4M9K"
FT   STRAND          1520..1524
FT                   /evidence="ECO:0007829|PDB:4M9K"
FT   HELIX           1525..1528
FT                   /evidence="ECO:0007829|PDB:4M9K"
FT   STRAND          1533..1535
FT                   /evidence="ECO:0007829|PDB:4M9K"
FT   STRAND          1538..1540
FT                   /evidence="ECO:0007829|PDB:4M9K"
FT   STRAND          1542..1546
FT                   /evidence="ECO:0007829|PDB:4M9K"
FT   TURN            1547..1550
FT                   /evidence="ECO:0007829|PDB:4M9K"
FT   STRAND          1551..1557
FT                   /evidence="ECO:0007829|PDB:4M9K"
FT   STRAND          1570..1574
FT                   /evidence="ECO:0007829|PDB:4M9K"
FT   STRAND          1582..1586
FT                   /evidence="ECO:0007829|PDB:4M9K"
FT   STRAND          1589..1592
FT                   /evidence="ECO:0007829|PDB:4M9K"
FT   STRAND          1594..1601
FT                   /evidence="ECO:0007829|PDB:4M9K"
FT   HELIX           1607..1609
FT                   /evidence="ECO:0007829|PDB:4M9K"
FT   STRAND          1613..1615
FT                   /evidence="ECO:0007829|PDB:4M9K"
FT   STRAND          1621..1625
FT                   /evidence="ECO:0007829|PDB:4M9K"
FT   STRAND          1628..1630
FT                   /evidence="ECO:0007829|PDB:4M9K"
FT   STRAND          1636..1639
FT                   /evidence="ECO:0007829|PDB:4M9K"
FT   HELIX           1641..1643
FT                   /evidence="ECO:0007829|PDB:4M9K"
FT   HELIX           2497..2507
FT                   /evidence="ECO:0007829|PDB:1L9K"
FT   HELIX           2510..2517
FT                   /evidence="ECO:0007829|PDB:1L9K"
FT   TURN            2518..2520
FT                   /evidence="ECO:0007829|PDB:1L9K"
FT   STRAND          2522..2525
FT                   /evidence="ECO:0007829|PDB:1L9K"
FT   HELIX           2527..2535
FT                   /evidence="ECO:0007829|PDB:1L9K"
FT   STRAND          2543..2545
FT                   /evidence="ECO:0007829|PDB:2P1D"
FT   HELIX           2546..2554
FT                   /evidence="ECO:0007829|PDB:1L9K"
FT   TURN            2555..2557
FT                   /evidence="ECO:0007829|PDB:1L9K"
FT   STRAND          2563..2568
FT                   /evidence="ECO:0007829|PDB:1L9K"
FT   TURN            2571..2573
FT                   /evidence="ECO:0007829|PDB:1L9K"
FT   HELIX           2574..2579
FT                   /evidence="ECO:0007829|PDB:1L9K"
FT   STRAND          2585..2591
FT                   /evidence="ECO:0007829|PDB:1L9K"
FT   HELIX           2609..2611
FT                   /evidence="ECO:0007829|PDB:1L9K"
FT   STRAND          2612..2615
FT                   /evidence="ECO:0007829|PDB:1L9K"
FT   HELIX           2620..2622
FT                   /evidence="ECO:0007829|PDB:1L9K"
FT   STRAND          2629..2633
FT                   /evidence="ECO:0007829|PDB:1L9K"
FT   HELIX           2642..2657
FT                   /evidence="ECO:0007829|PDB:1L9K"
FT   STRAND          2665..2671
FT                   /evidence="ECO:0007829|PDB:1L9K"
FT   HELIX           2676..2688
FT                   /evidence="ECO:0007829|PDB:1L9K"
FT   STRAND          2692..2694
FT                   /evidence="ECO:0007829|PDB:1L9K"
FT   STRAND          2706..2709
FT                   /evidence="ECO:0007829|PDB:1L9K"
FT   HELIX           2716..2729
FT                   /evidence="ECO:0007829|PDB:1L9K"
FT   STRAND          2739..2742
FT                   /evidence="ECO:0007829|PDB:1L9K"
SQ   SEQUENCE   3388 AA;  379219 MW;  79B7C87BE64D2D8F CRC64;
     MNDQRKKARN TPFNMLKRER NRVSTVQQLT KRFSLGMLQG RGPLKLFMAL VAFLRFLTIP
     PTAGILKRWG TIKKSKAINV LRGFRKEIGR MLNILNRRRR TAGMIIMLIP TVMAFHLTTR
     NGEPHMIVSR QEKGKSLLFK TKDGTNMCTL MAMDLGELCE DTITYKCPFL KQNEPEDIDC
     WCNSTSTWVT YGTCTTTGEH RREKRSVALV PHVGMGLETR TETWMSSEGA WKHAQRIETW
     ILRHPGFTIM AAILAYTIGT THFQRVLIFI LLTAIAPSMT MRCIGISNRD FVEGVSGGSW
     VDIVLEHGSC VTTMAKNKPT LDFELIKTEA KQPATLRKYC IEAKLTNTTT DSRCPTQGEP
     TLNEEQDKRF VCKHSMVDRG WGNGCGLFGK GGIVTCAMFT CKKNMEGKIV QPENLEYTVV
     ITPHSGEEHA VGNDTGKHGK EVKITPQSSI TEAELTGYGT VTMECSPRTG LDFNEMVLLQ
     MKDKAWLVHR QWFLDLPLPW LPGADTQGSN WIQKETLVTF KNPHAKKQDV VVLGSQEGAM
     HTALTGATEI QMSSGNLLFT GHLKCRLRMD KLQLKGMSYS MCTGKFKVVK EIAETQHGTI
     VIRVQYEGDG SPCKTPFEIM DLEKRHVLGR LTTVNPIVTE KDSPVNIEAE PPFGDSYIII
     GVEPGQLKLD WFKKGSSIGQ MFETTMRGAK RMAILGDTAW DFGSLGGVFT SIGKALHQVF
     GAIYGAAFSG VSWTMKILIG VIITWIGMNS RSTSLSVSLV LVGIVTLYLG VMVQADSGCV
     VSWKNKELKC GSGIFVTDNV HTWTEQYKFQ PESPSKLASA IQKAHEEGIC GIRSVTRLEN
     LMWKQITSEL NHILSENEVK LTIMTGDIKG IMQVGKRSLR PQPTELRYSW KTWGKAKMLS
     TELHNQTFLI DGPETAECPN TNRAWNSLEV EDYGFGVFTT NIWLRLREKQ DAFCDSKLMS
     AAIKDNRAVH ADMGYWIESA LNDTWKIEKA SFIEVKSCHW PKSHTLWSNG VLESEMVIPK
     NFAGPVSQHN NRPGYHTQTA GPWHLGKLEM DFDFCEGTTV VVTEDCGNRG PSLRTTTASG
     KLITEWCCRS CTLPPLRYRG EDGCWYGMEI RPLKEKEENL VSSLVTAGHG QIDNFSLGIL
     GMALFLEEML RTRVGTKHAI LLVAVSFVTL ITGNMSFRDL GRVMVMVGAT MTDDIGMGVT
     YLALLAAFKV RPTFAAGLLL RKLTSKELMM TTIGIVLLSQ SSIPETILEL TDALALGMMV
     LKMVRNMEKY QLAVTIMAIL CVPNAVILQN AWKVSCTILA VVSVSPLFLT SSQQKADWIP
     LALTIKGLNP TAIFLTTLSR TSKKRSWPLN EAIMAVGMVS ILASSLLKND TPMTGPLVAG
     GLLTVCYVLT GRSADLELER ATDVKWDDQA EISGSSPILS ITISEDGSMS IKNEEEEQTL
     TILIRTGLLV ISGLFPVSIP ITAAAWYLWE VKKQRAGVLW DVPSPPPVGK AELEDGAYRI
     KQKGILGYSQ IGAGVYKEGT FHTMWHVTRG AVLMHKGKRI EPSWADVKKD LISYGGGWKL
     EGEWKEGEEV QVLALEPGKN PRAVQTKPGL FRTNTGTIGA VSLDFSPGTS GSPIVDKKGK
     VVGLYGNGVV TRSGAYVSAI AQTEKSIEDN PEIEDDIFRK RRLTIMDLHP GAGKTKRYLP
     AIVREAIKRG LRTLILAPTR VVAAEMEEAL RGLPIRYQTP AIRAEHTGRE IVDLMCHATF
     TMRLLSPIRV PNYNLIIMDE AHFTDPASIA ARGYISTRVE MGEAAGIFMT ATPPGSRDPF
     PQSNAPIMDE EREIPERSWN SGHEWVTDFK GKTVWFVPSI KTGNDIAACL RKNGKRVIQL
     SRKTFDSEYV KTRTNDWDFV VTTDISEMGA NFKAERVIDP RRCMKPVILT DGEERVILAG
     PMPVTHSSAA QRRGRIGRNP RNENDQYIYM GEPLENDEDC AHWKEAKMLL DNINTPEGII
     PSMFEPEREK VDAIDGEYRL RGEARKTFVD LMRRGDLPVW LAYKVAAEGI NYADRRWCFD
     GTRNNQILEE NVEVEIWTKE GERKKLKPRW LDARIYSDPL ALKEFAAGRK SLTLNLITEM
     GRLPTFMTQK ARDALDNLAV LHTAEAGGKA YNHALSELPE TLETLLLLTL LATVTGGIFL
     FLMSGRGIGK MTLGMCCIIT ASILLWYAQI QPHWIAASII LEFFLIVLLI PEPEKQRTPQ
     DNQLTYVIIA ILTVVAATMA NEMGFLEKTK KDLGLGNIAT QQPESNILDI DLRPASAWTL
     YAVATTFITP MLRHSIENSS VNVSLTAIAN QATVLMGLGK GWPLSKMDIG VPLLAIGCYS
     QVNPITLTAA LLLLVAHYAI IGPGLQAKAT REAQKRAAAG IMKNPTVDGI TVIDLDPIPY
     DPKFEKQLGQ VMLLVLCVTQ VLMMRTTWAL CEALTLATGP VSTLWEGNPG RFWNTTIAVS
     MANIFRGSYL AGAGLLFSIM KNTTSTRRGT GNIGETLGEK WKSRLNALGK SEFQIYKKSG
     IQEVDRTLAK EGIKRGETDH HAVSRGSAKL RWFVERNLVT PEGKVVDLGC GRGGWSYYCG
     GLKNVREVKG LTKGGPGHEE PIPMSTYGWN LVRLQSGVDV FFVPPEKCDT LLCDIGESSP
     NPTVEAGRTL RVLNLVENWL NNNTQFCVKV LNPYMPSVIE RMETLQRKYG GALVRNPLSR
     NSTHEMYWVS NASGNIVSSV NMISRMLINR FTMRHKKATY EPDVDLGSGT RNIGIESETP
     NLDIIGKRIE KIKQEHETSW HYDQDHPYKT WAYHGSYETK QTGSASSMVN GVVRLLTKPW
     DVVPMVTQMA MTDTTPFGQQ RVFKEKVDTR TQEPKEGTKK LMKITAEWLW KELGKKKTPR
     MCTREEFTKK VRSNAALGAI FTDENKWKSA REAVEDSRFW ELVDKERNLH LEGKCETCVY
     NMMGKREKKL GEFGKAKGSR AIWYMWLGAR FLEFEALGFL NEDHWFSREN SLSGVEGEGL
     HKLGYILREV SKKEGGAMYA DDTAGWDTRI TIEDLKNEEM ITNHMAGEHK KLAEAIFKLT
     YQNKVVRVQR PTPRGTVMDI ISRRDQRGSG QVGTYGLNTF TNMEAQLIRQ MEGEGIFKSI
     QHLTASEEIA VQDWLARVGR ERLSRMAISG DDCVVKPLDD RFARALTALN DMGKVRKDIQ
     QWEPSRGWND WTQVPFCSHH FHELIMKDGR TLVVPCRNQD ELIGRARISQ GAGWSLRETA
     CLGKSYAQMW SLMYFHRRDL RLAANAICSA VPSHWVPTSR TTWSIHASHE WMTTEDMLTV
     WNKVWILENP WMEDKTPVES WEEIPYLGKR EDQWCGSLIG LTSRATWAKN IQTAINQVRS
     LIGNEEYTDY MPSMKRFRRE EEEAGVLW
 
 
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