POLLU_ARATH
ID POLLU_ARATH Reviewed; 824 AA.
AC Q9LTX4;
DT 29-MAR-2005, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 25-MAY-2022, entry version 116.
DE RecName: Full=Probable ion channel POLLUX;
DE Short=AtPOLLUX;
DE AltName: Full=Probable ion channel DMI1;
GN OrderedLocusNames=At5g49960; ORFNames=K9P8.10;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10718197; DOI=10.1093/dnares/7.1.31;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence
RT features of the regions of 3,076,755 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:31-63(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- SUBCELLULAR LOCATION: Nucleus membrane {ECO:0000250}; Multi-pass
CC membrane protein {ECO:0000250}.
CC -!- MISCELLANEOUS: The absence of an ortholog of CASTOR may explain the
CC inability of Arabidopsis to form root symbioses with mycorrhizal fungi.
CC -!- SIMILARITY: Belongs to the castor/pollux (TC 1.A.1.23) family.
CC {ECO:0000305}.
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DR EMBL; AB024032; BAA97017.1; -; Genomic_DNA.
DR EMBL; CP002688; AED95877.1; -; Genomic_DNA.
DR RefSeq; NP_199807.1; NM_124375.3.
DR AlphaFoldDB; Q9LTX4; -.
DR SMR; Q9LTX4; -.
DR STRING; 3702.AT5G49960.1; -.
DR iPTMnet; Q9LTX4; -.
DR SwissPalm; Q9LTX4; -.
DR PaxDb; Q9LTX4; -.
DR PRIDE; Q9LTX4; -.
DR ProteomicsDB; 226288; -.
DR EnsemblPlants; AT5G49960.1; AT5G49960.1; AT5G49960.
DR GeneID; 835060; -.
DR Gramene; AT5G49960.1; AT5G49960.1; AT5G49960.
DR KEGG; ath:AT5G49960; -.
DR Araport; AT5G49960; -.
DR TAIR; locus:2158799; AT5G49960.
DR eggNOG; ENOG502QU6W; Eukaryota.
DR HOGENOM; CLU_012980_0_0_1; -.
DR InParanoid; Q9LTX4; -.
DR OMA; NHADTEG; -.
DR OrthoDB; 181406at2759; -.
DR PhylomeDB; Q9LTX4; -.
DR PRO; PR:Q9LTX4; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9LTX4; baseline and differential.
DR Genevisible; Q9LTX4; AT.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0006811; P:ion transport; IEA:UniProtKB-KW.
DR InterPro; IPR044849; CASTOR/POLLUX/SYM8-like.
DR InterPro; IPR010420; CASTOR/POLLUX/SYM8_dom.
DR InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR PANTHER; PTHR31563; PTHR31563; 1.
DR Pfam; PF06241; Castor_Poll_mid; 1.
DR SUPFAM; SSF51735; SSF51735; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Ion channel; Ion transport; Membrane; Nucleus;
KW Reference proteome; Transmembrane; Transmembrane helix; Transport.
FT CHAIN 1..824
FT /note="Probable ion channel POLLUX"
FT /id="PRO_0000165856"
FT TRANSMEM 81..101
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 135..155
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 198..218
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 250..270
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 45..70
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 325..346
FT /evidence="ECO:0000255"
SQ SEQUENCE 824 AA; 92237 MW; AC992925E4E14BD8 CRC64;
MPIHTPRRTS LFQRSKTLPT NSYRRFTSPV IPTFRYDDGD TVSYDGDDSS NLPTVPNPEE
KPVPVPSQSP SQRITRLWTQ FSLTHCLKFI CSCSFTYVMF LRSKVSRLEA ENIILLTRCN
SSSDNNEMEE TNSRAVVFFS VIITFVLPFL LYMYLDDLSH VKNLLRRTNQ KKEDVPLKKR
LAYSLDVCFS VYPYAKLLAL LLATVVLIVY GGLALYAVSD CGVDEALWLS WTFVADSGSH
ADRVGVGARI VSVAISAGGM LIFATMLGLI SDAISKMVDS LRKGKSEVLE SNHILILGWS
DKLGSLLKQL AIANKSIGGG VVVVLAERDK EEMETDIAKF EFDLMGTSVI CRSGSPLILA
DLKKVSVSNA RAIIVLGSDE NADQSDARAL RVVLSLTGVK EGWKGHVVVE MCDLDNEPLV
KLVGGERIET VVAHDVIGRL MIQCALQPGL AQIWEDILGF ENAEFYIKKW PQLDGYCFED
VLISFPNAIP CGVKVAADGK IVLNPSDDYV LKEGDEILVI AEDDDTYAPG SLPEVRMCHF
PKMQDPPKYP EKILFCGWRR DIDDMIKVLE ALLAPGSELW MFNEVPDQER EKKLTDAGLN
ISKLVNIKLV HRQGNAVIRR HLESLPLETF DSILILAEQS LENSIVHSDS RSLATLLLIR
DIQSKRLPYK DAKSSALRIS GFPNCCWIRK MQQASDKSIV ISEILDSRTK NLVSVSRISD
YVLSNELVSM ALAMVAEDKQ INRVLKELFA EKGNELCIRP AEFYIYDQEE VCFYDIMRRA
RQRQEIIIGY RLAGMEQAVI NPTDKSKLTK WSLDDVFVVI ASSQ