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POL_BIV29
ID   POL_BIV29               Reviewed;        1475 AA.
AC   P19560; P19561; Q65593;
DT   01-FEB-1991, integrated into UniProtKB/Swiss-Prot.
DT   23-JAN-2007, sequence version 2.
DT   03-AUG-2022, entry version 155.
DE   RecName: Full=Gag-Pol polyprotein;
DE   AltName: Full=Pr170Gag-Pol;
DE   Contains:
DE     RecName: Full=Matrix protein p16;
DE              Short=MA;
DE   Contains:
DE     RecName: Full=p2L;
DE   Contains:
DE     RecName: Full=Capsid protein p26;
DE              Short=CA;
DE   Contains:
DE     RecName: Full=p3;
DE   Contains:
DE     RecName: Full=Transframe peptide;
DE     AltName: Full=p11;
DE   Contains:
DE     RecName: Full=Protease;
DE              EC=3.4.23.-;
DE     AltName: Full=P119;
DE     AltName: Full=Retropepsin;
DE   Contains:
DE     RecName: Full=Reverse transcriptase/ribonuclease H;
DE              Short=RT;
DE              EC=2.7.7.49;
DE              EC=2.7.7.7;
DE              EC=3.1.26.13;
DE     AltName: Full=Exoribonuclease H;
DE              EC=3.1.13.2;
DE     AltName: Full=P72;
DE   Contains:
DE     RecName: Full=Integrase;
DE              Short=IN;
DE              EC=2.7.7.- {ECO:0000250|UniProtKB:P04585};
DE              EC=3.1.-.- {ECO:0000250|UniProtKB:P04585};
GN   Name=gag-pol;
OS   Bovine immunodeficiency virus (strain R29) (BIV) (Bovine
OS   immunodeficiency-like virus).
OC   Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
OC   Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus.
OX   NCBI_TaxID=417296;
OH   NCBI_TaxID=9913; Bos taurus (Bovine).
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RC   STRAIN=Isolate R29-106, and Isolate R29-127;
RX   PubMed=2183467; DOI=10.1016/0042-6822(90)90424-p;
RA   Garvey K.J., Oberste M.S., Elser J.E., Braun M.J., Gonda M.A.;
RT   "Nucleotide sequence and genome organization of biologically active
RT   proviruses of the bovine immunodeficiency-like virus.";
RL   Virology 175:391-409(1990).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [MRNA].
RC   STRAIN=Isolate R29-Nadin;
RA   Nadin-Davis S.A., Chang S.C., Roth J.A., Carpenter S.;
RT   "Isolation and characterization of cDNAs encoding rev and tat of bovine
RT   immunodeficiency-like virus.";
RL   Submitted (OCT-1992) to the EMBL/GenBank/DDBJ databases.
RN   [3]
RP   RIBOSOMAL FRAMESHIFT, AND PROTEOLYTIC PROCESSING OF POLYPROTEIN.
RC   STRAIN=Isolate R29-127;
RX   PubMed=1331499; DOI=10.1128/jvi.66.12.6868-6877.1992;
RA   Battles J.K., Hu M.Y., Rasmussen L., Tobin G.J., Gonda M.A.;
RT   "Immunological characterization of the gag gene products of bovine
RT   immunodeficiency virus.";
RL   J. Virol. 66:6868-6877(1992).
RN   [4]
RP   FUNCTION, AND INTERACTION WITH HOST DYNLL1.
RX   PubMed=20148896; DOI=10.1111/j.1462-5822.2010.01453.x;
RA   Su Y., Qiao W., Guo T., Tan J., Li Z., Chen Y., Li X., Li Y., Zhou J.,
RA   Chen Q.;
RT   "Microtubule-dependent retrograde transport of bovine immunodeficiency
RT   virus.";
RL   Cell. Microbiol. 12:1098-1107(2010).
CC   -!- FUNCTION: Matrix protein p16 forms the outer shell of the core of the
CC       virus, lining the inner surface of the viral membrane. {ECO:0000250}.
CC   -!- FUNCTION: Capsid protein p26 forms the conical core of the virus that
CC       encapsulates the genomic RNA-nucleocapsid complex. Interaction between
CC       incoming particle-associated Gag proteins and host dynein allows
CC       intracellular microtubule-dependent virus transport toward the
CC       perinuclear region, prior to nucleus translocation and integration into
CC       host genome. {ECO:0000269|PubMed:20148896}.
CC   -!- FUNCTION: The aspartyl protease mediates proteolytic cleavages of Gag
CC       and Gag-Pol polyproteins during or shortly after the release of the
CC       virion from the plasma membrane. Cleavages take place as an ordered,
CC       step-wise cascade to yield mature proteins. This process is called
CC       maturation. Displays maximal activity during the budding process just
CC       prior to particle release from the cell. {ECO:0000255|PROSITE-
CC       ProRule:PRU00275}.
CC   -!- FUNCTION: Reverse transcriptase/ribonuclease H (RT) is a
CC       multifunctional enzyme that converts the viral RNA genome into dsDNA in
CC       the cytoplasm, shortly after virus entry into the cell. This enzyme
CC       displays a DNA polymerase activity that can copy either DNA or RNA
CC       templates, and a ribonuclease H (RNase H) activity that cleaves the RNA
CC       strand of RNA-DNA heteroduplexes in a partially processive 3' to 5'
CC       endonucleasic mode. Conversion of viral genomic RNA into dsDNA requires
CC       many steps. A tRNA binds to the primer-binding site (PBS) situated at
CC       the 5'-end of the viral RNA. RT uses the 3' end of the tRNA primer to
CC       perform a short round of RNA-dependent minus-strand DNA synthesis. The
CC       reading proceeds through the U5 region and ends after the repeated (R)
CC       region which is present at both ends of viral RNA. The portion of the
CC       RNA-DNA heteroduplex is digested by the RNase H, resulting in a ssDNA
CC       product attached to the tRNA primer. This ssDNA/tRNA hybridizes with
CC       the identical R region situated at the 3' end of viral RNA. This
CC       template exchange, known as minus-strand DNA strong stop transfer, can
CC       be either intra- or intermolecular. RT uses the 3' end of this newly
CC       synthesized short ssDNA to perform the RNA-dependent minus-strand DNA
CC       synthesis of the whole template. RNase H digests the RNA template
CC       except for a polypurine tract (PPT) situated at the 5'-end of the
CC       genome. It is not clear if both polymerase and RNase H activities are
CC       simultaneous. RNase H probably can proceed both in a polymerase-
CC       dependent (RNA cut into small fragments by the same RT performing DNA
CC       synthesis) and a polymerase-independent mode (cleavage of remaining RNA
CC       fragments by free RTs). Secondly, RT performs DNA-directed plus-strand
CC       DNA synthesis using the PPT that has not been removed by RNase H as
CC       primer. PPT and tRNA primers are then removed by RNase H. The 3' and 5'
CC       ssDNA PBS regions hybridize to form a circular dsDNA intermediate.
CC       Strand displacement synthesis by RT to the PBS and PPT ends produces a
CC       blunt ended, linear dsDNA copy of the viral genome that includes long
CC       terminal repeats (LTRs) at both ends (By similarity). {ECO:0000250}.
CC   -!- FUNCTION: Integrase catalyzes viral DNA integration into the host
CC       chromosome, by performing a series of DNA cutting and joining
CC       reactions. This enzyme activity takes place after virion entry into a
CC       cell and reverse transcription of the RNA genome in dsDNA (By
CC       similarity). {ECO:0000250}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) =
CC         diphosphate + DNA(n+1); Xref=Rhea:RHEA:22508, Rhea:RHEA-COMP:17339,
CC         Rhea:RHEA-COMP:17340, ChEBI:CHEBI:33019, ChEBI:CHEBI:61560,
CC         ChEBI:CHEBI:173112; EC=2.7.7.49; Evidence={ECO:0000255|PROSITE-
CC         ProRule:PRU00405};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) =
CC         diphosphate + DNA(n+1); Xref=Rhea:RHEA:22508, Rhea:RHEA-COMP:17339,
CC         Rhea:RHEA-COMP:17340, ChEBI:CHEBI:33019, ChEBI:CHEBI:61560,
CC         ChEBI:CHEBI:173112; EC=2.7.7.7; Evidence={ECO:0000255|PROSITE-
CC         ProRule:PRU00405};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=Endohydrolysis of RNA in RNA/DNA hybrids. Three different
CC         cleavage modes: 1. sequence-specific internal cleavage of RNA. Human
CC         immunodeficiency virus type 1 and Moloney murine leukemia virus
CC         enzymes prefer to cleave the RNA strand one nucleotide away from the
CC         RNA-DNA junction. 2. RNA 5'-end directed cleavage 13-19 nucleotides
CC         from the RNA end. 3. DNA 3'-end directed cleavage 15-20 nucleotides
CC         away from the primer terminus.; EC=3.1.26.13;
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=3'-end directed exonucleolytic cleavage of viral RNA-DNA
CC         hybrid.; EC=3.1.13.2;
CC   -!- SUBUNIT: Interacts with host light chain cytoplasmic dynein DYNLL1;
CC       this interaction is critical for intracellular microtubule-dependent
CC       viral genome transport. {ECO:0000269|PubMed:20148896}.
CC   -!- SUBCELLULAR LOCATION: [Matrix protein p16]: Virion {ECO:0000305}.
CC   -!- SUBCELLULAR LOCATION: [Capsid protein p26]: Virion {ECO:0000305}.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Ribosomal frameshifting; Named isoforms=2;
CC         Comment=This strategy of translation probably allows the virus to
CC         modulate the quantity of each viral protein.;
CC       Name=Gag-Pol polyprotein;
CC         IsoId=P19560-1; Sequence=Displayed;
CC       Name=Gag polyprotein;
CC         IsoId=P19558-1; Sequence=External;
CC   -!- PTM: Specific enzymatic cleavages by the viral protease yield mature
CC       proteins. The protease is released by autocatalytic cleavage. The
CC       polyprotein is cleaved during and after budding, this process is termed
CC       maturation (By similarity). {ECO:0000250}.
CC   -!- MISCELLANEOUS: The reverse transcriptase is an error-prone enzyme that
CC       lacks a proof-reading function. High mutations rate is a direct
CC       consequence of this characteristic. RT also displays frequent template
CC       switching leading to high recombination rate. Recombination mostly
CC       occurs between homologous regions of the two copackaged RNA genomes. If
CC       these two RNA molecules derive from different viral strains, reverse
CC       transcription will give rise to highly recombinated proviral DNAs (By
CC       similarity). {ECO:0000250}.
CC   -!- MISCELLANEOUS: The sequence shown is that of isolate R29-127.
CC   -!- MISCELLANEOUS: [Isoform Gag-Pol polyprotein]: Produced by -1 ribosomal
CC       frameshifting at the gag-pol genes boundary.
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DR   EMBL; M32690; AAA91271.1; ALT_SEQ; Genomic_RNA.
DR   EMBL; L04972; AAA42767.1; ALT_SEQ; Genomic_DNA.
DR   PIR; B34742; GNLJBT.
DR   PDB; 3KKR; X-ray; 2.45 A; A=1257-1405.
DR   PDB; 3KKS; X-ray; 2.20 A; A/B=1257-1405.
DR   PDBsum; 3KKR; -.
DR   PDBsum; 3KKS; -.
DR   SMR; P19560; -.
DR   MEROPS; A02.005; -.
DR   EvolutionaryTrace; P19560; -.
DR   PRO; PR:P19560; -.
DR   GO; GO:0043657; C:host cell; IEA:GOC.
DR   GO; GO:0019013; C:viral nucleocapsid; IEA:UniProtKB-KW.
DR   GO; GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR   GO; GO:0004533; F:exoribonuclease H activity; IEA:UniProtKB-EC.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR   GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR   GO; GO:0039660; F:structural constituent of virion; IEA:UniProtKB-KW.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:UniProtKB-KW.
DR   GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR   GO; GO:0075713; P:establishment of integrated proviral latency; IEA:UniProtKB-KW.
DR   GO; GO:0075521; P:microtubule-dependent intracellular transport of viral material towards nucleus; IEA:UniProtKB-KW.
DR   GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR   GO; GO:0046718; P:viral entry into host cell; IEA:UniProtKB-KW.
DR   GO; GO:0044826; P:viral genome integration into host DNA; IEA:UniProtKB-KW.
DR   Gene3D; 1.10.10.200; -; 1.
DR   Gene3D; 1.10.1200.30; -; 1.
DR   Gene3D; 1.10.375.10; -; 1.
DR   Gene3D; 2.30.30.10; -; 1.
DR   Gene3D; 2.40.70.10; -; 1.
DR   Gene3D; 3.30.420.10; -; 2.
DR   Gene3D; 3.30.70.270; -; 2.
DR   InterPro; IPR001969; Aspartic_peptidase_AS.
DR   InterPro; IPR043502; DNA/RNA_pol_sf.
DR   InterPro; IPR045345; Gag_p24_C.
DR   InterPro; IPR017856; Integrase-like_N.
DR   InterPro; IPR036862; Integrase_C_dom_sf_retrovir.
DR   InterPro; IPR001037; Integrase_C_retrovir.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR003308; Integrase_Zn-bd_dom_N.
DR   InterPro; IPR001995; Peptidase_A2_cat.
DR   InterPro; IPR021109; Peptidase_aspartic_dom_sf.
DR   InterPro; IPR018061; Retropepsins.
DR   InterPro; IPR008916; Retrov_capsid_C.
DR   InterPro; IPR008919; Retrov_capsid_N.
DR   InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR002156; RNaseH_domain.
DR   InterPro; IPR036397; RNaseH_sf.
DR   InterPro; IPR000477; RT_dom.
DR   InterPro; IPR010661; RVT_thumb.
DR   InterPro; IPR001878; Znf_CCHC.
DR   InterPro; IPR036875; Znf_CCHC_sf.
DR   Pfam; PF19317; Gag_p24_C; 1.
DR   Pfam; PF00552; IN_DBD_C; 1.
DR   Pfam; PF02022; Integrase_Zn; 1.
DR   Pfam; PF00075; RNase_H; 1.
DR   Pfam; PF00665; rve; 1.
DR   Pfam; PF00077; RVP; 1.
DR   Pfam; PF00078; RVT_1; 1.
DR   Pfam; PF06817; RVT_thumb; 1.
DR   Pfam; PF00098; zf-CCHC; 2.
DR   SMART; SM00343; ZnF_C2HC; 2.
DR   SUPFAM; SSF46919; SSF46919; 1.
DR   SUPFAM; SSF47943; SSF47943; 1.
DR   SUPFAM; SSF50122; SSF50122; 1.
DR   SUPFAM; SSF50630; SSF50630; 1.
DR   SUPFAM; SSF53098; SSF53098; 2.
DR   SUPFAM; SSF56672; SSF56672; 1.
DR   SUPFAM; SSF57756; SSF57756; 1.
DR   PROSITE; PS50175; ASP_PROT_RETROV; 1.
DR   PROSITE; PS00141; ASP_PROTEASE; 1.
DR   PROSITE; PS50994; INTEGRASE; 1.
DR   PROSITE; PS51027; INTEGRASE_DBD; 1.
DR   PROSITE; PS50879; RNASE_H_1; 1.
DR   PROSITE; PS50878; RT_POL; 1.
DR   PROSITE; PS50158; ZF_CCHC; 2.
DR   PROSITE; PS50876; ZF_INTEGRASE; 1.
PE   1: Evidence at protein level;
KW   3D-structure; Aspartyl protease; Capsid protein; Coiled coil;
KW   Cytoplasmic inwards viral transport; DNA integration; DNA recombination;
KW   DNA-binding; DNA-directed DNA polymerase; Endonuclease;
KW   Host-virus interaction; Hydrolase; Magnesium; Metal-binding;
KW   Microtubular inwards viral transport; Multifunctional enzyme; Nuclease;
KW   Nucleotidyltransferase; Protease; Repeat; Ribosomal frameshifting;
KW   RNA-binding; RNA-directed DNA polymerase; Transferase;
KW   Viral genome integration; Viral matrix protein; Viral nucleoprotein;
KW   Viral release from host cell; Virion; Virion maturation;
KW   Virus entry into host cell; Zinc; Zinc-finger.
FT   CHAIN           1..1475
FT                   /note="Gag-Pol polyprotein"
FT                   /id="PRO_0000272324"
FT   CHAIN           1..126
FT                   /note="Matrix protein p16"
FT                   /evidence="ECO:0000255"
FT                   /id="PRO_0000272325"
FT   PEPTIDE         127..148
FT                   /note="p2L"
FT                   /evidence="ECO:0000250"
FT                   /id="PRO_0000272326"
FT   CHAIN           149..367
FT                   /note="Capsid protein p26"
FT                   /evidence="ECO:0000255"
FT                   /id="PRO_0000272327"
FT   PEPTIDE         368..392
FT                   /note="p3"
FT                   /evidence="ECO:0000250"
FT                   /id="PRO_0000272328"
FT   CHAIN           393..472
FT                   /note="Transframe peptide"
FT                   /evidence="ECO:0000255"
FT                   /id="PRO_0000272329"
FT   CHAIN           473..562
FT                   /note="Protease"
FT                   /evidence="ECO:0000255"
FT                   /id="PRO_0000038823"
FT   CHAIN           563..1193
FT                   /note="Reverse transcriptase/ribonuclease H"
FT                   /evidence="ECO:0000255"
FT                   /id="PRO_0000038824"
FT   CHAIN           1194..1475
FT                   /note="Integrase"
FT                   /evidence="ECO:0000255"
FT                   /id="PRO_0000038825"
FT   DOMAIN          492..565
FT                   /note="Peptidase A2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00275"
FT   DOMAIN          619..806
FT                   /note="Reverse transcriptase"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00405"
FT   DOMAIN          999..1119
FT                   /note="RNase H type-1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00408"
FT   DOMAIN          1248..1400
FT                   /note="Integrase catalytic"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00457"
FT   ZN_FING         403..420
FT                   /note="CCHC-type 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00047"
FT   ZN_FING         421..438
FT                   /note="CCHC-type 2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00047"
FT   ZN_FING         1199..1240
FT                   /note="Integrase-type"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00450"
FT   DNA_BIND        1419..1465
FT                   /note="Integrase-type"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00506"
FT   REGION          130..159
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        130..154
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   ACT_SITE        497
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU10094"
FT   BINDING         1208
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00450"
FT   BINDING         1212
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00450"
FT   BINDING         1236
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00450"
FT   BINDING         1239
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00450"
FT   SITE            126..127
FT                   /note="Cleavage; by viral protease"
FT                   /evidence="ECO:0000255"
FT   SITE            148..149
FT                   /note="Cleavage; by viral protease"
FT                   /evidence="ECO:0000255"
FT   SITE            367..368
FT                   /note="Cleavage; by viral protease"
FT                   /evidence="ECO:0000250"
FT   SITE            392..393
FT                   /note="Cleavage; by viral protease"
FT                   /evidence="ECO:0000250"
FT   SITE            472..473
FT                   /note="Cleavage; by viral protease"
FT                   /evidence="ECO:0000255"
FT   SITE            562..563
FT                   /note="Cleavage; by viral protease"
FT                   /evidence="ECO:0000255"
FT   SITE            1193..1194
FT                   /note="Cleavage; by viral protease"
FT                   /evidence="ECO:0000255"
FT   VARIANT         17
FT                   /note="P -> L (in strain: Isolate R29-106 and Isolate R29-
FT                   Nadin)"
FT   VARIANT         117
FT                   /note="D -> E (in strain: Isolate R29-106)"
FT   VARIANT         454
FT                   /note="T -> I (in strain: Isolate R29-Nadin)"
FT   VARIANT         577
FT                   /note="V -> I (in strain: Isolate R29-Nadin)"
FT   VARIANT         645
FT                   /note="R -> K (in strain: Isolate R29-Nadin)"
FT   VARIANT         729
FT                   /note="V -> I (in strain: Isolate R29-Nadin)"
FT   VARIANT         1095
FT                   /note="V -> I (in strain: Isolate R29-Nadin)"
FT   VARIANT         1226
FT                   /note="K -> R (in strain: Isolate R29-106 and Isolate R29-
FT                   Nadin)"
FT   VARIANT         1244
FT                   /note="T -> A (in strain: Isolate R29-106 and Isolate R29-
FT                   Nadin)"
FT   STRAND          1257..1265
FT                   /evidence="ECO:0007829|PDB:3KKS"
FT   STRAND          1268..1275
FT                   /evidence="ECO:0007829|PDB:3KKS"
FT   TURN            1276..1278
FT                   /evidence="ECO:0007829|PDB:3KKS"
FT   STRAND          1281..1289
FT                   /evidence="ECO:0007829|PDB:3KKS"
FT   HELIX           1291..1304
FT                   /evidence="ECO:0007829|PDB:3KKS"
FT   STRAND          1308..1312
FT                   /evidence="ECO:0007829|PDB:3KKS"
FT   HELIX           1316..1319
FT                   /evidence="ECO:0007829|PDB:3KKS"
FT   HELIX           1321..1329
FT                   /evidence="ECO:0007829|PDB:3KKS"
FT   STRAND          1333..1338
FT                   /evidence="ECO:0007829|PDB:3KKS"
FT   HELIX           1342..1362
FT                   /evidence="ECO:0007829|PDB:3KKS"
FT   HELIX           1363..1365
FT                   /evidence="ECO:0007829|PDB:3KKS"
FT   HELIX           1369..1382
FT                   /evidence="ECO:0007829|PDB:3KKS"
FT   HELIX           1392..1401
FT                   /evidence="ECO:0007829|PDB:3KKS"
SQ   SEQUENCE   1475 AA;  168063 MW;  4D249DCBB6158A78 CRC64;
     MKRRELEKKL RKVRVTPQQD KYYTIGNLQW AIRMINLMGI KCVCDEECSA AEVALIITQF
     SALDLENSPI RGKEEVAIKN TLKVFWSLLA GYKPESTETA LGYWEAFTYR EREARADKEG
     EIKSIYPSLT QNTQNKKQTS NQTNTQSLPA ITTQDGTPRF DPDLMKQLKI WSDATERNGV
     DLHAVNILGV ITANLVQEEI KLLLNSTPKW RLDVQLIESK VREKENAHRT WKQHHPEAPK
     TDEIIGKGLS SAEQATLISV ECRETFRQWV LQAAMEVAQA KHATPGPINI HQGPKEPYTD
     FINRLVAALE GMAAPETTKE YLLQHLSIDH ANEDCQSILR PLGPNTPMEK KLEACRVVGS
     QKSKMQFLVA AMKEMGIQSP IPAVLPHTPE AYASQTSGPE DGRRCYGCGK TGHLKRNCKQ
     QKCYHCGKPG HQARNCRSKN REVLLCPLWA EEPTTEQFSP EQHEFCDPIC TPSYIRLDKQ
     PFIKVFIGGR WVKGLVDTGA DEVVLKNIHW DRIKGYPGTP IKQIGVNGVN VAKRKTHVEW
     RFKDKTGIID VLFSDTPVNL FGRSLLRSIV TCFTLLVHTE KIEPLPVKVR GPGPKVPQWP
     LTKEKYQALK EIVKDLLAEG KISEAAWDNP YNTPVFVIKK KGTGRWRMLM DFRELNKITV
     KGQEFSTGLP YPPGIKECEH LTAIDIKDAY FTIPLHEDFR PFTAFSVVPV NREGPIERFQ
     WNVLPQGWVC SPAIYQTTTQ KIIENIKKSH PDVMLYQYMD DLLIGSNRDD HKQIVQEIRD
     KLGSYGFKTP DEKVQEERVK WIGFELTPKK WRFQPRQLKI KNPLTVNELQ QLVGNCVWVQ
     PEVKIPLYPL TDLLRDKTNL QEKIQLTPEA IKCVEEFNLK LKDPEWKDRI REGAELVIKI
     QMVPRGIVFD LLQDGNPIWG GVKGLNYDHS NKIKKILRTM NELNRTVVIM TGREASFLLP
     GSSEDWEAAL QKEESLTQIF PVKFYRHSCR WTSICGPVRE NLTTYYTDGG KKGKTAAAVY
     WCEGRTKSKV FPGTNQQAEL KAICMALLDG PPKMNIITDS RYAYEGMREE PETWAREGIW
     LEIAKILPFK QYVGVGWVPA HKGIGGNTEA DEGVKKALEQ MAPCSPPEAI LLKPGEKQNL
     ETGIYMQGLR PQSFLPRADL PVAITGTMVD SELQLQLLNI GTEHIRIQKD EVFMTCFLEN
     IPSATEDHER WHTSPDILVR QFHLPKRIAK EIVARCQECK RTTTSPVRGT NPRGRFLWQM
     DNTHWNKTII WVAVETNSGL VEAQVIPEET ALQVALCILQ LIQRYTVLHL HSDNGPCFTA
     HRIENLCKYL GITKTTGIPY NPQSQGVVER AHRDLKDRLA AYQGDCETVE AALSLALVSL
     NKKRGGIGGH TPYEIYLESE HTKYQDQLEQ QFSKQKIEKW CYVRNRRKEW KGPYKVLWDG
     DGAAVIEEEG KTALYPHRHM RFIPPPDSDI QDGSS
 
 
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