POPL1_CAEEL
ID POPL1_CAEEL Reviewed; 752 AA.
AC Q11188;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 20-JUN-2002, sequence version 2.
DT 03-AUG-2022, entry version 114.
DE RecName: Full=Ribonucleases P/MRP protein subunit popl-1 {ECO:0000305};
DE EC=3.1.26.5 {ECO:0000250|UniProtKB:Q99575};
GN Name=popl-1 {ECO:0000312|WormBase:C05D11.9};
GN ORFNames=C05D11.9 {ECO:0000312|WormBase:C05D11.9};
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
CC -!- FUNCTION: Component of ribonuclease P, a ribonucleoprotein complex that
CC generates mature tRNA molecules by cleaving their 5'-ends (By
CC similarity). Also a component of the MRP ribonuclease complex, which
CC cleaves pre-rRNA sequences (By similarity).
CC {ECO:0000250|UniProtKB:Q99575}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Endonucleolytic cleavage of RNA, removing 5'-extranucleotides
CC from tRNA precursor.; EC=3.1.26.5;
CC Evidence={ECO:0000250|UniProtKB:Q99575};
CC -!- SUBUNIT: Component of nuclear RNase P and RNase MRP ribonucleoproteins
CC (By similarity). Several subunits of RNase P are also part of the RNase
CC MRP complex (By similarity). {ECO:0000250|UniProtKB:Q99575}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000250|UniProtKB:Q99575}.
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DR EMBL; BX284603; CCD63199.1; -; Genomic_DNA.
DR PIR; E88482; E88482.
DR RefSeq; NP_498408.1; NM_066007.5.
DR AlphaFoldDB; Q11188; -.
DR SMR; Q11188; -.
DR STRING; 6239.C05D11.9; -.
DR EPD; Q11188; -.
DR PaxDb; Q11188; -.
DR PeptideAtlas; Q11188; -.
DR EnsemblMetazoa; C05D11.9.1; C05D11.9.1; WBGene00015486.
DR GeneID; 175911; -.
DR KEGG; cel:CELE_C05D11.9; -.
DR UCSC; C05D11.9; c. elegans.
DR CTD; 175911; -.
DR WormBase; C05D11.9; CE24787; WBGene00015486; popl-1.
DR eggNOG; KOG3322; Eukaryota.
DR GeneTree; ENSGT00390000017478; -.
DR HOGENOM; CLU_007205_1_1_1; -.
DR InParanoid; Q11188; -.
DR OMA; NCVIRDR; -.
DR OrthoDB; 543991at2759; -.
DR PhylomeDB; Q11188; -.
DR PRO; PR:Q11188; -.
DR Proteomes; UP000001940; Chromosome III.
DR Bgee; WBGene00015486; Expressed in germ line (C elegans) and 4 other tissues.
DR GO; GO:0005655; C:nucleolar ribonuclease P complex; IBA:GO_Central.
DR GO; GO:0000172; C:ribonuclease MRP complex; IBA:GO_Central.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0090502; P:RNA phosphodiester bond hydrolysis, endonucleolytic; IBA:GO_Central.
DR GO; GO:0001682; P:tRNA 5'-leader removal; IEA:InterPro.
DR GO; GO:0008033; P:tRNA processing; IBA:GO_Central.
DR InterPro; IPR039182; Pop1.
DR InterPro; IPR009723; Pop1_N.
DR InterPro; IPR012590; POPLD_dom.
DR PANTHER; PTHR22731; PTHR22731; 1.
DR Pfam; PF06978; POP1; 2.
DR Pfam; PF08170; POPLD; 1.
PE 3: Inferred from homology;
KW Hydrolase; Nucleus; Reference proteome; RNA-binding; tRNA processing.
FT CHAIN 1..752
FT /note="Ribonucleases P/MRP protein subunit popl-1"
FT /id="PRO_0000065150"
FT REGION 638..663
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 641..657
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 752 AA; 87123 MW; E8D225644CEE4D1B CRC64;
MFIEVEKFVE ARTNSIAQLL KAIDNDALVS GEVTKGPRTA AQRLPRHMRR RAMAYDIRRF
PRTMREFAAA HLISKHAKKC PSRFARRKSA NSRTKFGRST STKGIWLSTH VWHAKRFRMI
QKWGFKLADR SFQRGFRAVL RDSNKNCVIR DRSYYTCVTI QCTDAYSKIS QFSQKGCRGQ
SSRDEEEECH QLYMPGKYPF GYIGPARFQR LSGDKVHIWI HPSSKLQFMK ALLEYYNLEK
QENTEEDLYK NSEIKVSIDA ENICRFHLSG PKCLSKLRDS IRFVNDEKFS SEHNYFLSVS
DSVFQSSRDG EVINLLIEDP RTTWDRKTVL KHKKVNKEAD NERIRVSKFW NKEFREMAIE
KRMADSEFHK QNSSKINGVI STEAKVPIIL IIRNEGLKAL DGADILIPEP FAKDFWVSLQ
RRGVRASGLR DEYAAHLESK ALYYPLDDVG SEAGRESELA MKKELIEKYL GKPHNRRCKH
WSAVSVKYPF EFKWDELSQD WNLSNKPRSE AFVCRDLQKL RIIEEAMKKG SGLEEFQEPG
MLIPVKLQFF GRGRPKKYGM VCLPTDDDLI SIRKNRNREI IQTPPEASSQ DSDIVEAMEI
EEITVKKNQG FMSLEAAASE KPINLKLLFE ETTKLDDKTT KRKRVNRKKR ESKKRRKIEQ
EKRKEEAEVE EVQKLATKYR FSANREIIGR LVAGEQSVLA GHGVGIGYIC ANTLSLIASN
YHKSKTVVMV RNSTSKYYHP AYVTILKNAT KI