ATA7_ARATH
ID ATA7_ARATH Reviewed; 140 AA.
AC F4JL89; O49116;
DT 05-OCT-2016, integrated into UniProtKB/Swiss-Prot.
DT 05-OCT-2016, sequence version 2.
DT 03-AUG-2022, entry version 74.
DE RecName: Full=Protein ARABIDOPSIS THALIANA ANTHER 7 {ECO:0000303|PubMed:9687065};
DE Short=AtA7 {ECO:0000303|PubMed:9687065};
DE AltName: Full=Non-specific lipid transfer protein Y.4 {ECO:0000303|PubMed:18291034};
DE Short=AtLtpY.4 {ECO:0000303|PubMed:18291034};
DE Flags: Precursor;
GN Name=ATA7 {ECO:0000303|PubMed:9687065};
GN OrderedLocusNames=At4g28395 {ECO:0000312|Araport:AT4G28395};
GN ORFNames=F20O9 {ECO:0000305};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), AND TISSUE SPECIFICITY.
RC STRAIN=cv. Landsberg erecta;
RX PubMed=9687065; DOI=10.1023/a:1005964431302;
RA Rubinelli P., Hu Y., Ma H.;
RT "Identification, sequence analysis and expression studies of novel anther-
RT specific genes of Arabidopsis thaliana.";
RL Plant Mol. Biol. 37:607-619(1998).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617198; DOI=10.1038/47134;
RA Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA Martienssen R., McCombie W.R.;
RT "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL Nature 402:769-777(1999).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY.
RX PubMed=18291034; DOI=10.1186/1471-2164-9-86;
RA Boutrot F., Chantret N., Gautier M.F.;
RT "Genome-wide analysis of the rice and Arabidopsis non-specific lipid
RT transfer protein (nsLtp) gene families and identification of wheat nsLtp
RT genes by EST data mining.";
RL BMC Genomics 9:86-86(2008).
RN [6]
RP REVIEW.
RX PubMed=23505340; DOI=10.1199/tab.0161;
RA Li-Beisson Y., Shorrosh B., Beisson F., Andersson M.X., Arondel V.,
RA Bates P.D., Baud S., Bird D., Debono A., Durrett T.P., Franke R.B.,
RA Graham I.A., Katayama K., Kelly A.A., Larson T., Markham J.E., Miquel M.,
RA Molina I., Nishida I., Rowland O., Samuels L., Schmid K.M., Wada H.,
RA Welti R., Xu C., Zallot R., Ohlrogge J.;
RT "Acyl-lipid metabolism.";
RL Arabidopsis Book 11:E0161-E0161(2013).
RN [7]
RP TISSUE SPECIFICITY.
RX PubMed=24096413; DOI=10.1104/pp.113.225706;
RA Huang M.-D., Chen T.-L.L., Huang A.H.C.;
RT "Abundant type III lipid transfer proteins in Arabidopsis tapetum are
RT secreted to the locule and become a constituent of the pollen exine.";
RL Plant Physiol. 163:1218-1229(2013).
CC -!- SUBCELLULAR LOCATION: Endoplasmic reticulum lumen {ECO:0000255}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative initiation; Named isoforms=2;
CC Name=1;
CC IsoId=F4JL89-1; Sequence=Displayed;
CC Name=2;
CC IsoId=F4JL89-2; Sequence=VSP_058491;
CC -!- TISSUE SPECIFICITY: Tapetum-specific (PubMed:9687065, PubMed:24096413).
CC Also present in pollen (PubMed:24096413). {ECO:0000269|PubMed:24096413,
CC ECO:0000269|PubMed:9687065}.
CC -!- SIMILARITY: Belongs to the plant LTP family. {ECO:0000305}.
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DR EMBL; AF037589; AAC39503.1; -; mRNA.
DR EMBL; AL021749; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CP002687; AEE85478.1; -; Genomic_DNA.
DR EMBL; AY084401; AAM60975.1; -; mRNA.
DR RefSeq; NP_567807.2; NM_118981.3. [F4JL89-2]
DR AlphaFoldDB; F4JL89; -.
DR SMR; F4JL89; -.
DR STRING; 3702.AT4G28395.1; -.
DR PaxDb; F4JL89; -.
DR PRIDE; F4JL89; -.
DR ProteomicsDB; 246529; -. [F4JL89-1]
DR EnsemblPlants; AT4G28395.1; AT4G28395.1; AT4G28395. [F4JL89-2]
DR GeneID; 828956; -.
DR Gramene; AT4G28395.1; AT4G28395.1; AT4G28395. [F4JL89-2]
DR KEGG; ath:AT4G28395; -.
DR Araport; AT4G28395; -.
DR TAIR; locus:505006530; AT4G28395.
DR eggNOG; ENOG502S6VB; Eukaryota.
DR HOGENOM; CLU_128423_2_2_1; -.
DR InParanoid; F4JL89; -.
DR OMA; CECIEIM; -.
DR OrthoDB; 1555762at2759; -.
DR PhylomeDB; F4JL89; -.
DR PRO; PR:F4JL89; -.
DR Proteomes; UP000006548; Chromosome 4.
DR ExpressionAtlas; F4JL89; baseline and differential.
DR GO; GO:0005788; C:endoplasmic reticulum lumen; TAS:TAIR.
DR GO; GO:0008289; F:lipid binding; IEA:InterPro.
DR GO; GO:0005319; F:lipid transporter activity; ISS:TAIR.
DR GO; GO:0048235; P:pollen sperm cell differentiation; TAS:TAIR.
DR Gene3D; 1.10.110.10; -; 1.
DR InterPro; IPR036312; Bifun_inhib/LTP/seed_sf.
DR InterPro; IPR016140; Bifunc_inhib/LTP/seed_store.
DR InterPro; IPR000528; Plant_nsLTP.
DR PANTHER; PTHR33076; PTHR33076; 1.
DR Pfam; PF00234; Tryp_alpha_amyl; 1.
DR SUPFAM; SSF47699; SSF47699; 1.
PE 2: Evidence at transcript level;
KW Alternative initiation; Disulfide bond; Endoplasmic reticulum;
KW Reference proteome; Signal.
FT SIGNAL 1..20
FT /evidence="ECO:0000255"
FT CHAIN 21..140
FT /note="Protein ARABIDOPSIS THALIANA ANTHER 7"
FT /id="PRO_0000437203"
FT DISULFID 29..87
FT /evidence="ECO:0000255"
FT DISULFID 39..54
FT /evidence="ECO:0000255"
FT DISULFID 55..111
FT /evidence="ECO:0000255"
FT DISULFID 85..125
FT /evidence="ECO:0000255"
FT VAR_SEQ 1
FT /note="M -> MHNKLHLRNELITIYIIYRYRFLFVHESYISPSLASVLSSM (in
FT isoform 2)"
FT /evidence="ECO:0000305"
FT /id="VSP_058491"
SQ SEQUENCE 140 AA; 15597 MW; 4BF1BD225F1BC5DF CRC64;
MKIHAILVVA FLVLMKTAVS QDNNPLEHCR DVFVSFMPCM GFVEGIFQQP SPDCCRGVTH
LNNVVKFTSP GSRNRQDSGE TERVCLCIEI MGNANHLPFL PAAINNLPLR CSLTLSFPIS
VDMDCSQFRN TKNPDVEKLN
