ATAB2_MAIZE
ID ATAB2_MAIZE Reviewed; 390 AA.
AC B4FTR7;
DT 30-AUG-2017, integrated into UniProtKB/Swiss-Prot.
DT 23-SEP-2008, sequence version 1.
DT 03-AUG-2022, entry version 76.
DE RecName: Full=Protein TAB2 homolog, chloroplastic {ECO:0000305};
DE Short=Zm-TAB2 {ECO:0000303|PubMed:25725436};
DE Flags: Precursor;
GN Name=TAB2 {ECO:0000303|PubMed:25725436};
GN ORFNames=ZEAMMB73_Zm00001d017179 {ECO:0000312|EMBL:AQK72533.1};
OS Zea mays (Maize).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea.
OX NCBI_TaxID=4577;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. B73;
RX PubMed=19965430; DOI=10.1126/science.1178534;
RA Schnable P.S., Ware D., Fulton R.S., Stein J.C., Wei F., Pasternak S.,
RA Liang C., Zhang J., Fulton L., Graves T.A., Minx P., Reily A.D.,
RA Courtney L., Kruchowski S.S., Tomlinson C., Strong C., Delehaunty K.,
RA Fronick C., Courtney B., Rock S.M., Belter E., Du F., Kim K., Abbott R.M.,
RA Cotton M., Levy A., Marchetto P., Ochoa K., Jackson S.M., Gillam B.,
RA Chen W., Yan L., Higginbotham J., Cardenas M., Waligorski J., Applebaum E.,
RA Phelps L., Falcone J., Kanchi K., Thane T., Scimone A., Thane N., Henke J.,
RA Wang T., Ruppert J., Shah N., Rotter K., Hodges J., Ingenthron E.,
RA Cordes M., Kohlberg S., Sgro J., Delgado B., Mead K., Chinwalla A.,
RA Leonard S., Crouse K., Collura K., Kudrna D., Currie J., He R.,
RA Angelova A., Rajasekar S., Mueller T., Lomeli R., Scara G., Ko A.,
RA Delaney K., Wissotski M., Lopez G., Campos D., Braidotti M., Ashley E.,
RA Golser W., Kim H., Lee S., Lin J., Dujmic Z., Kim W., Talag J., Zuccolo A.,
RA Fan C., Sebastian A., Kramer M., Spiegel L., Nascimento L., Zutavern T.,
RA Miller B., Ambroise C., Muller S., Spooner W., Narechania A., Ren L.,
RA Wei S., Kumari S., Faga B., Levy M.J., McMahan L., Van Buren P.,
RA Vaughn M.W., Ying K., Yeh C.-T., Emrich S.J., Jia Y., Kalyanaraman A.,
RA Hsia A.-P., Barbazuk W.B., Baucom R.S., Brutnell T.P., Carpita N.C.,
RA Chaparro C., Chia J.-M., Deragon J.-M., Estill J.C., Fu Y., Jeddeloh J.A.,
RA Han Y., Lee H., Li P., Lisch D.R., Liu S., Liu Z., Nagel D.H., McCann M.C.,
RA SanMiguel P., Myers A.M., Nettleton D., Nguyen J., Penning B.W.,
RA Ponnala L., Schneider K.L., Schwartz D.C., Sharma A., Soderlund C.,
RA Springer N.M., Sun Q., Wang H., Waterman M., Westerman R., Wolfgruber T.K.,
RA Yang L., Yu Y., Zhang L., Zhou S., Zhu Q., Bennetzen J.L., Dawe R.K.,
RA Jiang J., Jiang N., Presting G.G., Wessler S.R., Aluru S.,
RA Martienssen R.A., Clifton S.W., McCombie W.R., Wing R.A., Wilson R.K.;
RT "The B73 maize genome: complexity, diversity, and dynamics.";
RL Science 326:1112-1115(2009).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RX PubMed=18937034; DOI=10.1007/s11103-008-9415-4;
RA Alexandrov N.N., Brover V.V., Freidin S., Troukhan M.E., Tatarinova T.V.,
RA Zhang H., Swaller T.J., Lu Y.-P., Bouck J., Flavell R.B., Feldmann K.A.;
RT "Insights into corn genes derived from large-scale cDNA sequencing.";
RL Plant Mol. Biol. 69:179-194(2009).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. B73;
RX PubMed=19936069; DOI=10.1371/journal.pgen.1000740;
RA Soderlund C., Descour A., Kudrna D., Bomhoff M., Boyd L., Currie J.,
RA Angelova A., Collura K., Wissotski M., Ashley E., Morrow D., Fernandes J.,
RA Walbot V., Yu Y.;
RT "Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.";
RL PLoS Genet. 5:E1000740-E1000740(2009).
RN [4]
RP FUNCTION, AND DISRUPTION PHENOTYPE.
RX PubMed=25725436; DOI=10.1016/j.bbabio.2015.02.014;
RA Belcher S., Williams-Carrier R., Stiffler N., Barkan A.;
RT "Large-scale genetic analysis of chloroplast biogenesis in maize.";
RL Biochim. Biophys. Acta 1847:1004-1016(2015).
CC -!- FUNCTION: Nuclear genome-encoded factor involved in the biogenesis of
CC photosystem I (PSI). Required for the accumulation of PSI during plant
CC development. Does not seem to be required for the translation of mRNAs
CC of the PSI subunits. {ECO:0000269|PubMed:25725436}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast {ECO:0000255}.
CC -!- DISRUPTION PHENOTYPE: Pale green leaf phenotype.
CC {ECO:0000269|PubMed:25725436}.
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DR EMBL; CM000781; AQK72533.1; -; Genomic_DNA.
DR EMBL; BT040505; ACF85510.1; -; mRNA.
DR EMBL; EU968538; ACG40656.1; -; mRNA.
DR RefSeq; NP_001150851.1; NM_001157379.2.
DR AlphaFoldDB; B4FTR7; -.
DR STRING; 4577.GRMZM2G081955_P01; -.
DR PaxDb; B4FTR7; -.
DR PRIDE; B4FTR7; -.
DR EnsemblPlants; Zm00001eb246820_T001; Zm00001eb246820_P001; Zm00001eb246820.
DR GeneID; 100284484; -.
DR Gramene; Zm00001eb246820_T001; Zm00001eb246820_P001; Zm00001eb246820.
DR KEGG; zma:100284484; -.
DR eggNOG; ENOG502QVJR; Eukaryota.
DR HOGENOM; CLU_058545_1_0_1; -.
DR OMA; FFRRQMN; -.
DR OrthoDB; 1210582at2759; -.
DR Proteomes; UP000007305; Chromosome 5.
DR ExpressionAtlas; B4FTR7; baseline and differential.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0004435; F:phosphatidylinositol phospholipase C activity; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0009658; P:chloroplast organization; IMP:UniProtKB.
DR GO; GO:0035556; P:intracellular signal transduction; IEA:InterPro.
DR GO; GO:0006629; P:lipid metabolic process; IEA:InterPro.
DR GO; GO:0048564; P:photosystem I assembly; IMP:UniProtKB.
DR InterPro; IPR001711; PLipase_C_Pinositol-sp_Y.
DR InterPro; IPR009472; Tab2-like.
DR PANTHER; PTHR34556; PTHR34556; 1.
DR Pfam; PF06485; Tab2_like; 1.
PE 2: Evidence at transcript level;
KW Chloroplast; Plastid; Reference proteome; Transit peptide.
FT TRANSIT 1..69
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT CHAIN 70..390
FT /note="Protein TAB2 homolog, chloroplastic"
FT /id="PRO_0000441332"
FT REGION 16..85
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 56..71
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 390 AA; 42555 MW; DDFF01D511DE766E CRC64;
MTTATAIVAG HGLALRRSLP LPNPPGRATT SVSLSARPVT PARRMIVPAS PSPRSPRRCR
SISSESSTEA SAAADIADEE VEAENKVDPQ AEVCYLDPDV DPESIREWEL DFCSRPILDA
RGKKVWELVV CDATLSLQFT RYFPNNAINS VTLRDALASV SEALGVPMPD RVRFFRSQMQ
TIITRACGDL GVKAVPSRRC VSLLLWLEER YEVVYSRHPG FQAGTRPLLA LDNPFPTTLP
ENLFGDKWAF VQLPFSAVRE EVESLERRYA FGAGLDLELL GFELDDTTLV PGVAVESSRA
KPLAAWMNGL EICAMEADTG RASLILSAGV STRYVYSGYQ KTAASTQEAE AWEAAKKACG
GLHFLAIQEN LNSDGCVGFW LLLDLPPPPV